RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ITGAEP38570 1179 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 ARID5AQ03989 594 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 FMR1Q06787 632 aaKnown RBP eCLIP6.82□□□□□ -1.32
SF1-217ENST00000486960 GRM1Q13255 1194 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 PUS10Q3MIT2 529 aaKnown RBP6.82□□□□□ -1.32
SF1-217ENST00000486960 PPP1R15BQ5SWA1 713 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 ZNF710Q8N1W2 664 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 RNF34Q969K3 372 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 MKL1Q969V6 931 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 RUNDC1Q96C34 613 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 TRIM44Q96DX7 344 aaPredicted RBP6.82□□□□□ -1.32
SF1-217ENST00000486960 FAM122AQ96E09 287 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 CASS4Q9NQ75 786 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 CEP126Q9P2H0 1117 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 HPS5Q9UPZ3 1129 aa6.82□□□□□ -1.32
SF1-217ENST00000486960 IFRD1O00458 451 aaPredicted RBP6.81□□□□□ -1.32
SF1-217ENST00000486960 NPHP1O15259 732 aa6.81□□□□□ -1.32
SF1-217ENST00000486960 TIMM44O43615 452 aa6.81□□□□□ -1.32
SF1-217ENST00000486960 SOX11P35716 441 aa6.81□□□□□ -1.32
SF1-217ENST00000486960 USP5P45974 858 aa6.81□□□□□ -1.32
SF1-217ENST00000486960 TOM1L2Q6ZVM7 507 aa6.81□□□□□ -1.32
SF1-217ENST00000486960 CDC5LQ99459 802 aaKnown RBP6.81□□□□□ -1.32
SF1-217ENST00000486960 MPHOSPH6Q99547 160 aaKnown RBP6.81□□□□□ -1.32
SF1-217ENST00000486960 SLKQ9H2G2 1235 aaPredicted RBP6.81□□□□□ -1.32
SF1-217ENST00000486960 METTL5Q9NRN9 209 aaKnown RBP6.81□□□□□ -1.32
SF1-217ENST00000486960 FAM217BQ9NTX9 383 aaPredicted RBP6.81□□□□□ -1.32
SF1-217ENST00000486960 TTF2Q9UNY4 1162 aaKnown RBP6.81□□□□□ -1.32
SF1-217ENST00000486960 PDZRN3Q9UPQ7 1066 aa6.81□□□□□ -1.32
SF1-217ENST00000486960 AKAP11Q9UKA4 1901 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 SOX1O00570 391 aaPredicted RBP6.8□□□□□ -1.32
SF1-217ENST00000486960 CAND2O75155 1236 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 FOSP01100 380 aaPredicted RBP6.8□□□□□ -1.32
SF1-217ENST00000486960 COL6A1P12109 1028 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 PLCG2P16885 1265 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 BRD3Q15059 726 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 LDLRAD1Q5T700 205 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 TTC39BQ5VTQ0 682 aaPredicted RBP6.8□□□□□ -1.32
SF1-217ENST00000486960 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 ZIC5Q96T25 663 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 ACBD3Q9H3P7 528 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 AVENQ9NQS1 362 aaPredicted RBP6.8□□□□□ -1.32
SF1-217ENST00000486960 METRNQ9UJH8 293 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 CHIC2Q9UKJ5 165 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 SALL2Q9Y467 1007 aaPredicted RBP6.8□□□□□ -1.32
SF1-217ENST00000486960 ABCC11Q96J66 1382 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 DLEC1Q9Y238 1755 aa6.8□□□□□ -1.32
SF1-217ENST00000486960 PPIP5K1Q6PFW1 1433 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 ATP9BO43861 1147 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 RGS20O76081 388 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 MMP14P50281 582 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 TGFB2P61812 414 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 AMPD3Q01432 767 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 DDX46Q7L014 1031 aaKnown RBP6.79□□□□□ -1.32
SF1-217ENST00000486960 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 OTUD6BQ8N6M0 293 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 EFCAB3Q8N7B9 438 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 ANP32BQ92688 251 aaKnown RBP6.79□□□□□ -1.32
SF1-217ENST00000486960 NEUROD6Q96NK8 337 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 APBA2Q99767 749 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 EMILIN3Q9NT22 766 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 LIMD1Q9UGP4 676 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 CCNL1Q9UK58 526 aaPredicted RBP6.79□□□□□ -1.32
SF1-217ENST00000486960 ABT1Q9ULW3 272 aaKnown RBP6.79□□□□□ -1.32
SF1-217ENST00000486960 FER1L6Q2WGJ9 1857 aa6.79□□□□□ -1.32
SF1-217ENST00000486960 WDR17Q8IZU2 1322 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 KRT18P05783 430 aaKnown RBP6.78□□□□□ -1.32
SF1-217ENST00000486960 OSBPP22059 807 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 GNALP38405 381 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 SEMA3FQ13275 785 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 KCTD2Q14681 263 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 TBC1D10BQ4KMP7 808 aaPredicted RBP6.78□□□□□ -1.32
SF1-217ENST00000486960 TMEM132EQ6IEE7 984 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 SVIPQ8NHG7 77 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 IFT122Q9HBG6 1241 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 DCTN4Q9UJW0 460 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 SH3BP1Q9Y3L3 701 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 BDP1A6H8Y1 2624 aa6.78□□□□□ -1.32
SF1-217ENST00000486960 POTEFA5A3E0 1075 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 CBFA2T2O43439 604 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 LDHCP07864 332 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 MMP10P09238 476 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 USP17L8P0C7I0 530 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 SCP2P22307 547 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 ATP2B4P23634 1241 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 TNNI2P48788 182 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 PTGDRQ13258 359 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 RAPGEF1Q13905 1077 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 PPP2R5AQ15172 486 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 IER5LQ5T953 404 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 PPP4R4Q6NUP7 873 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 RIC3Q7Z5B4 369 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 LDHDQ86WU2 507 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 VPS37DQ86XT2 251 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 WDR75Q8IWA0 830 aaKnown RBP6.77□□□□□ -1.33
SF1-217ENST00000486960 CCDC24Q8N4L8 307 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 PRR7Q8TB68 274 aa6.77□□□□□ -1.33
SF1-217ENST00000486960 ENOX1Q8TC92 643 aaKnown RBP6.77□□□□□ -1.33
SF1-217ENST00000486960 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms