RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SULF1Q8IWU6 871 aa15.32■□□□□ 0.04
MSH5-216ENST00000484309 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
MSH5-216ENST00000484309 HDAC5Q9UQL6 1122 aa15.32■□□□□ 0.04
MSH5-216ENST00000484309 PCDHAC2Q9Y5I4 1007 aa15.32■□□□□ 0.04
MSH5-216ENST00000484309 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
MSH5-216ENST00000484309 WNT10BO00744 389 aa15.31■□□□□ 0.04
MSH5-216ENST00000484309 RLBP1P12271 317 aa15.31■□□□□ 0.04
MSH5-216ENST00000484309 CHAF1AQ13111 956 aaPredicted RBP15.31■□□□□ 0.04
MSH5-216ENST00000484309 PUM3Q15397 648 aaKnown RBP15.31■□□□□ 0.04
MSH5-216ENST00000484309 CYP4F22Q6NT55 531 aa15.31■□□□□ 0.04
MSH5-216ENST00000484309 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
MSH5-216ENST00000484309 TDRD7Q8NHU6 1098 aaKnown RBP15.31■□□□□ 0.04
MSH5-216ENST00000484309 HDAC9Q9UKV0 1011 aa15.31■□□□□ 0.04
MSH5-216ENST00000484309 TLL2Q9Y6L7 1015 aa15.31■□□□□ 0.04
MSH5-216ENST00000484309 SRGAP3O43295 1099 aa15.3■□□□□ 0.04
MSH5-216ENST00000484309 HSPA1AP0DMV8 641 aaKnown RBP15.3■□□□□ 0.04
MSH5-216ENST00000484309 HSPA1BP0DMV9 641 aaKnown RBP15.3■□□□□ 0.04
MSH5-216ENST00000484309 BCAMP50895 628 aa15.3■□□□□ 0.04
MSH5-216ENST00000484309 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
MSH5-216ENST00000484309 DZIP1LQ8IYY4 767 aaKnown RBP15.3■□□□□ 0.04
MSH5-216ENST00000484309 CDCA5Q96FF9 252 aa15.3■□□□□ 0.04
MSH5-216ENST00000484309 FAM205AQ6ZU69 1335 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 WDR33Q9C0J8 1336 aaKnown RBP15.29■□□□□ 0.04
MSH5-216ENST00000484309 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
MSH5-216ENST00000484309 GNAI2P04899 355 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 IFIT1P09914 478 aaKnown RBP15.29■□□□□ 0.04
MSH5-216ENST00000484309 SLC5A1P13866 664 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 FGFR2P21802 821 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 CAVIN4Q5BKX8 364 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 MFSD14BQ5SR56 506 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 PRAMEF18Q5VWM3 479 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 FBXO33Q7Z6M2 555 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 SAPCD2Q86UD0 394 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 CAPNS2Q96L46 248 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 C1orf115Q9H7X2 142 aa15.29■□□□□ 0.04
MSH5-216ENST00000484309 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 CIAO1O76071 339 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 DLGAP5Q15398 846 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 ATP2B3Q16720 1220 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 CFAP100Q494V2 611 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 PANK1Q8TE04 598 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 GBA2Q9HCG7 927 aaPredicted RBP15.28■□□□□ 0.04
MSH5-216ENST00000484309 COPRSQ9NQ92 184 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 CEP126Q9P2H0 1117 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 PAPPA2Q9BXP8 1791 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 PCNTO95613 3336 aa15.28■□□□□ 0.04
MSH5-216ENST00000484309 COL1A1P02452 1464 aaPredicted RBP15.27■□□□□ 0.04
MSH5-216ENST00000484309 AOX1Q06278 1338 aa15.27■□□□□ 0.04
MSH5-216ENST00000484309 PNMA6EA0A0J9YXQ4 647 aa15.27■□□□□ 0.04
MSH5-216ENST00000484309 IL15P40933 162 aaPredicted RBP15.27■□□□□ 0.04
MSH5-216ENST00000484309 RBM5P52756 815 aaKnown RBP eCLIP15.27■□□□□ 0.04
MSH5-216ENST00000484309 HUNKP57058 714 aa15.27■□□□□ 0.04
MSH5-216ENST00000484309 FKBP1AP62942 108 aaKnown RBP15.27■□□□□ 0.04
MSH5-216ENST00000484309 MTX1Q13505 466 aa15.27■□□□□ 0.04
MSH5-216ENST00000484309 GRIK5Q16478 980 aa15.27■□□□□ 0.04
MSH5-216ENST00000484309 LPIN2Q92539 896 aa15.27■□□□□ 0.04
MSH5-216ENST00000484309 ZBED3Q96IU2 234 aaPredicted RBP15.27■□□□□ 0.04
MSH5-216ENST00000484309 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
MSH5-216ENST00000484309 TTF2Q9UNY4 1162 aaKnown RBP15.27■□□□□ 0.04
MSH5-216ENST00000484309 CLRN2A0PK11 232 aa15.26■□□□□ 0.03
MSH5-216ENST00000484309 AOC2O75106 756 aa15.26■□□□□ 0.03
MSH5-216ENST00000484309 ADORA1P30542 326 aa15.25■□□□□ 0.03
MSH5-216ENST00000484309 ECE1P42892 770 aa15.25■□□□□ 0.03
MSH5-216ENST00000484309 TFCP2Q12800 502 aa15.25■□□□□ 0.03
MSH5-216ENST00000484309 C2orf69Q8N8R5 385 aa15.25■□□□□ 0.03
MSH5-216ENST00000484309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.25■□□□□ 0.03
MSH5-216ENST00000484309 MYH2Q9UKX2 1941 aa15.25■□□□□ 0.03
MSH5-216ENST00000484309 AKAP11Q9UKA4 1901 aa15.24■□□□□ 0.03
MSH5-216ENST00000484309 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
MSH5-216ENST00000484309 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
MSH5-216ENST00000484309 MMP14P50281 582 aa15.24■□□□□ 0.03
MSH5-216ENST00000484309 MOB2Q70IA6 237 aa15.24■□□□□ 0.03
MSH5-216ENST00000484309 APOBEC3FQ8IUX4 373 aaKnown RBP15.24■□□□□ 0.03
MSH5-216ENST00000484309 PRMT6Q96LA8 375 aaPredicted RBP15.24■□□□□ 0.03
MSH5-216ENST00000484309 VEZTQ9HBM0 779 aa15.24■□□□□ 0.03
MSH5-216ENST00000484309 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
MSH5-216ENST00000484309 PHKA1P46020 1223 aa15.23■□□□□ 0.03
MSH5-216ENST00000484309 PRKG1Q13976 671 aa15.23■□□□□ 0.03
MSH5-216ENST00000484309 MTMR14Q8NCE2 650 aa15.23■□□□□ 0.03
MSH5-216ENST00000484309 RCAN3Q9UKA8 241 aa15.23■□□□□ 0.03
MSH5-216ENST00000484309 OTOFQ9HC10 1997 aa15.23■□□□□ 0.03
MSH5-216ENST00000484309 MYO5AQ9Y4I1 1855 aaKnown RBP15.23■□□□□ 0.03
MSH5-216ENST00000484309 ZBTB7BO15156 539 aaPredicted RBP15.22■□□□□ 0.03
MSH5-216ENST00000484309 FOXN1O15353 648 aa15.22■□□□□ 0.03
MSH5-216ENST00000484309 CRKP46108 304 aa15.22■□□□□ 0.03
MSH5-216ENST00000484309 TIMM10P62072 90 aa15.22■□□□□ 0.03
MSH5-216ENST00000484309 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
MSH5-216ENST00000484309 TBC1D22AQ8WUA7 517 aa15.22■□□□□ 0.03
MSH5-216ENST00000484309 A0A1B0GUL7 405 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 MYO1BO43795 1136 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 G3BP1Q13283 466 aaKnown RBP eCLIP15.21■□□□□ 0.03
MSH5-216ENST00000484309 RGMBQ6NW40 437 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 AIDAQ96BJ3 306 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 HHIPL1Q96JK4 782 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 NEUROD6Q96NK8 337 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 ZIC5Q96T25 663 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 TDRD3Q9H7E2 651 aaKnown RBP15.21■□□□□ 0.03
MSH5-216ENST00000484309 WBP1LQ9NX94 342 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 SERPINA10Q9UK55 444 aa15.21■□□□□ 0.03
MSH5-216ENST00000484309 FZD1Q9UP38 647 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms