RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SCAF8Q9UPN6 1271 aaKnown RBP16.11■□□□□ 0.17
HDAC1-209ENST00000484305 F8W031 263 aaPredicted RBP16.1■□□□□ 0.17
HDAC1-209ENST00000484305 HSPA1AP0DMV8 641 aaKnown RBP16.1■□□□□ 0.17
HDAC1-209ENST00000484305 HSPA1BP0DMV9 641 aaKnown RBP16.1■□□□□ 0.17
HDAC1-209ENST00000484305 FGFR2P21802 821 aa16.1■□□□□ 0.17
HDAC1-209ENST00000484305 MMP14P50281 582 aa16.1■□□□□ 0.17
HDAC1-209ENST00000484305 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
HDAC1-209ENST00000484305 HDAC9Q9UKV0 1011 aa16.1■□□□□ 0.17
HDAC1-209ENST00000484305 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
HDAC1-209ENST00000484305 FAM205AQ6ZU69 1335 aa16.1■□□□□ 0.17
HDAC1-209ENST00000484305 WDR33Q9C0J8 1336 aaKnown RBP16.1■□□□□ 0.17
HDAC1-209ENST00000484305 BCAMP50895 628 aa16.09■□□□□ 0.17
HDAC1-209ENST00000484305 FKBP1AP62942 108 aaKnown RBP16.09■□□□□ 0.17
HDAC1-209ENST00000484305 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
HDAC1-209ENST00000484305 CYP4F22Q6NT55 531 aa16.09■□□□□ 0.17
HDAC1-209ENST00000484305 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
HDAC1-209ENST00000484305 ZBED3Q96IU2 234 aaPredicted RBP16.09■□□□□ 0.17
HDAC1-209ENST00000484305 CAPNS2Q96L46 248 aa16.09■□□□□ 0.17
HDAC1-209ENST00000484305 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
HDAC1-209ENST00000484305 IQSEC3Q9UPP2 1182 aaPredicted RBP16.09■□□□□ 0.17
HDAC1-209ENST00000484305 PITPNM2Q9BZ72 1349 aa16.09■□□□□ 0.17
HDAC1-209ENST00000484305 ARAP2Q8WZ64 1704 aa16.08■□□□□ 0.17
HDAC1-209ENST00000484305 CIAO1O76071 339 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 IFIT1P09914 478 aaKnown RBP16.08■□□□□ 0.16
HDAC1-209ENST00000484305 GRM1Q13255 1194 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 VPS37DQ86XT2 251 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 CDCA5Q96FF9 252 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 COPRSQ9NQ92 184 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 PCDHAC2Q9Y5I4 1007 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 ECM29Q5VYK3 1845 aa16.08■□□□□ 0.16
HDAC1-209ENST00000484305 SRGAP3O43295 1099 aa16.07■□□□□ 0.16
HDAC1-209ENST00000484305 RLBP1P12271 317 aa16.07■□□□□ 0.16
HDAC1-209ENST00000484305 MTX1Q13505 466 aa16.07■□□□□ 0.16
HDAC1-209ENST00000484305 MFSD14BQ5SR56 506 aa16.07■□□□□ 0.16
HDAC1-209ENST00000484305 GBA2Q9HCG7 927 aaPredicted RBP16.07■□□□□ 0.16
HDAC1-209ENST00000484305 MYH13Q9UKX3 1938 aa16.07■□□□□ 0.16
HDAC1-209ENST00000484305 THSD7BQ9C0I4 1608 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 GNAI2P04899 355 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 SLC5A1P13866 664 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 IL15P40933 162 aaPredicted RBP16.06■□□□□ 0.16
HDAC1-209ENST00000484305 ECE1P42892 770 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 HUNKP57058 714 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 DLGAP5Q15398 846 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 PRAMEF18Q5VWM3 479 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 C2orf69Q8N8R5 385 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 LPIN2Q92539 896 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 HHIPL1Q96JK4 782 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
HDAC1-209ENST00000484305 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
HDAC1-209ENST00000484305 CHAF1AQ13111 956 aaPredicted RBP16.05■□□□□ 0.16
HDAC1-209ENST00000484305 GRIK5Q16478 980 aa16.05■□□□□ 0.16
HDAC1-209ENST00000484305 CFAP100Q494V2 611 aa16.05■□□□□ 0.16
HDAC1-209ENST00000484305 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
HDAC1-209ENST00000484305 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
HDAC1-209ENST00000484305 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
HDAC1-209ENST00000484305 AOC2O75106 756 aa16.04■□□□□ 0.16
HDAC1-209ENST00000484305 ATP2B3Q16720 1220 aa16.04■□□□□ 0.16
HDAC1-209ENST00000484305 PRMT6Q96LA8 375 aaPredicted RBP16.04■□□□□ 0.16
HDAC1-209ENST00000484305 WBP1LQ9NX94 342 aa16.04■□□□□ 0.16
HDAC1-209ENST00000484305 TTF2Q9UNY4 1162 aaKnown RBP16.04■□□□□ 0.16
HDAC1-209ENST00000484305 AOX1Q06278 1338 aa16.03■□□□□ 0.16
HDAC1-209ENST00000484305 SPDYE2BA6NHP3 402 aa16.03■□□□□ 0.16
HDAC1-209ENST00000484305 SPDYE6P0CI01 402 aa16.03■□□□□ 0.16
HDAC1-209ENST00000484305 RBM5P52756 815 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC1-209ENST00000484305 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
HDAC1-209ENST00000484305 FOXN1O15353 648 aa16.02■□□□□ 0.16
HDAC1-209ENST00000484305 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.16
HDAC1-209ENST00000484305 RGMBQ6NW40 437 aa16.02■□□□□ 0.16
HDAC1-209ENST00000484305 APOBEC3FQ8IUX4 373 aaKnown RBP16.02■□□□□ 0.16
HDAC1-209ENST00000484305 C1orf115Q9H7X2 142 aa16.02■□□□□ 0.16
HDAC1-209ENST00000484305 SERPINA10Q9UK55 444 aa16.02■□□□□ 0.16
HDAC1-209ENST00000484305 PAPPA2Q9BXP8 1791 aa16.02■□□□□ 0.15
HDAC1-209ENST00000484305 CLRN2A0PK11 232 aa16.01■□□□□ 0.15
HDAC1-209ENST00000484305 ZBTB7BO15156 539 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-209ENST00000484305 ADORA1P30542 326 aa16.01■□□□□ 0.15
HDAC1-209ENST00000484305 MAP2K2P36507 400 aa16.01■□□□□ 0.15
HDAC1-209ENST00000484305 TFCP2Q12800 502 aa16.01■□□□□ 0.15
HDAC1-209ENST00000484305 COL13A1Q5TAT6 717 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-209ENST00000484305 MOB2Q70IA6 237 aa16.01■□□□□ 0.15
HDAC1-209ENST00000484305 PANK1Q8TE04 598 aa16.01■□□□□ 0.15
HDAC1-209ENST00000484305 TBC1D22AQ8WUA7 517 aa16.01■□□□□ 0.15
HDAC1-209ENST00000484305 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.01■□□□□ 0.15
HDAC1-209ENST00000484305 COL1A1P02452 1464 aaPredicted RBP16■□□□□ 0.15
HDAC1-209ENST00000484305 FAM155AB1AL88 458 aaPredicted RBP16■□□□□ 0.15
HDAC1-209ENST00000484305 MYO1BO43795 1136 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 PHKA1P46020 1223 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 CRKP46108 304 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 TIMM10P62072 90 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 FKBP1BP68106 108 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 AIDAQ96BJ3 306 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 ZIC5Q96T25 663 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 DEFB129Q9H1M3 183 aa16■□□□□ 0.15
HDAC1-209ENST00000484305 ZNF157P51786 506 aaPredicted RBP15.99■□□□□ 0.15
HDAC1-209ENST00000484305 ATP8B2P98198 1209 aa15.99■□□□□ 0.15
HDAC1-209ENST00000484305 POLA2Q14181 598 aa15.99■□□□□ 0.15
HDAC1-209ENST00000484305 TDRD3Q9H7E2 651 aaKnown RBP15.99■□□□□ 0.15
HDAC1-209ENST00000484305 VEZTQ9HBM0 779 aa15.99■□□□□ 0.15
HDAC1-209ENST00000484305 A0A1B0GUL7 405 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms