RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, humanhuman

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-208ENST00000482460 KLHDC4Q8TBB5 520 aa28.47■■■□□ 2.15
CYTH3-208ENST00000482460 ZBED3Q96IU2 234 aaPredicted RBP28.47■■■□□ 2.15
CYTH3-208ENST00000482460 PRDM10Q9NQV6 1147 aa28.46■■■□□ 2.15
CYTH3-208ENST00000482460 PDE8BO95263 885 aa28.45■■■□□ 2.14
CYTH3-208ENST00000482460 RFX5P48382 616 aaPredicted RBP28.45■■■□□ 2.14
CYTH3-208ENST00000482460 HNRNPUQ00839 825 aaKnown RBP eCLIP28.45■■■□□ 2.14
CYTH3-208ENST00000482460 RGMBQ6NW40 437 aa28.45■■■□□ 2.14
CYTH3-208ENST00000482460 VGLL2Q8N8G2 317 aa28.45■■■□□ 2.14
CYTH3-208ENST00000482460 BEGAINQ9BUH8 593 aa28.45■■■□□ 2.14
CYTH3-208ENST00000482460 SCAF8Q9UPN6 1271 aaKnown RBP28.45■■■□□ 2.14
CYTH3-208ENST00000482460 HDAC5Q9UQL6 1122 aa28.45■■■□□ 2.14
CYTH3-208ENST00000482460 FAM205AQ6ZU69 1335 aa28.44■■■□□ 2.14
CYTH3-208ENST00000482460 TNS4Q8IZW8 715 aa28.44■■■□□ 2.14
CYTH3-208ENST00000482460 PTPN12Q05209 780 aaKnown RBP28.43■■■□□ 2.14
CYTH3-208ENST00000482460 NOGQ13253 232 aa28.43■■■□□ 2.14
CYTH3-208ENST00000482460 DLGAP5Q15398 846 aa28.43■■■□□ 2.14
CYTH3-208ENST00000482460 FBXO33Q7Z6M2 555 aa28.43■■■□□ 2.14
CYTH3-208ENST00000482460 MTMR14Q8NCE2 650 aa28.43■■■□□ 2.14
CYTH3-208ENST00000482460 JAG2Q9Y219 1238 aa28.43■■■□□ 2.14
CYTH3-208ENST00000482460 F8W031 263 aaPredicted RBP28.42■■■□□ 2.14
CYTH3-208ENST00000482460 IPO8O15397 1037 aaKnown RBP28.42■■■□□ 2.14
CYTH3-208ENST00000482460 LBX1P52954 281 aa28.42■■■□□ 2.14
CYTH3-208ENST00000482460 FKBP1BP68106 108 aa28.42■■■□□ 2.14
CYTH3-208ENST00000482460 INTS3Q68E01 1043 aaKnown RBP28.42■■■□□ 2.14
CYTH3-208ENST00000482460 EYA2O00167 538 aa28.41■■■□□ 2.14
CYTH3-208ENST00000482460 HSPA8P11142 646 aaKnown RBP28.41■■■□□ 2.14
CYTH3-208ENST00000482460 CAVIN4Q5BKX8 364 aa28.41■■■□□ 2.14
CYTH3-208ENST00000482460 VPS37DQ86XT2 251 aa28.41■■■□□ 2.14
CYTH3-208ENST00000482460 APOBEC3FQ8IUX4 373 aaKnown RBP28.41■■■□□ 2.14
CYTH3-208ENST00000482460 CCDC102AQ96A19 550 aa28.41■■■□□ 2.14
CYTH3-208ENST00000482460 ZNF157P51786 506 aaPredicted RBP28.4■■■□□ 2.14
CYTH3-208ENST00000482460 PRAMEF18Q5VWM3 479 aa28.4■■■□□ 2.14
CYTH3-208ENST00000482460 FAM155AB1AL88 458 aaPredicted RBP28.39■■■□□ 2.14
CYTH3-208ENST00000482460 BCAR3O75815 825 aa28.39■■■□□ 2.14
CYTH3-208ENST00000482460 CFAP100Q494V2 611 aa28.39■■■□□ 2.14
CYTH3-208ENST00000482460 MFSD14BQ5SR56 506 aa28.39■■■□□ 2.14
CYTH3-208ENST00000482460 MEIS3Q99687 375 aa28.39■■■□□ 2.14
CYTH3-208ENST00000482460 FBXO3Q9UK99 471 aa28.39■■■□□ 2.14
CYTH3-208ENST00000482460 LRRFIP2Q9Y608 721 aaKnown RBP28.39■■■□□ 2.14
CYTH3-208ENST00000482460 PAPPA2Q9BXP8 1791 aa28.39■■■□□ 2.13
CYTH3-208ENST00000482460 FGFR2P21802 821 aa28.38■■■□□ 2.13
CYTH3-208ENST00000482460 PUM3Q15397 648 aaKnown RBP28.38■■■□□ 2.13
CYTH3-208ENST00000482460 IFIT1P09914 478 aaKnown RBP28.37■■■□□ 2.13
CYTH3-208ENST00000482460 ATG9AQ7Z3C6 839 aa28.37■■■□□ 2.13
CYTH3-208ENST00000482460 ZIC5Q96T25 663 aa28.37■■■□□ 2.13
CYTH3-208ENST00000482460 ECM29Q5VYK3 1845 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 SPDYE2BA6NHP3 402 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 CA12O43570 354 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 GNAI3P08754 354 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 SPDYE6P0CI01 402 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 TRIM27P14373 513 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 NF2P35240 595 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 ATF7IPQ6VMQ6 1270 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 FRAT1Q92837 279 aaPredicted RBP28.36■■■□□ 2.13
CYTH3-208ENST00000482460 PCDHAC2Q9Y5I4 1007 aa28.36■■■□□ 2.13
CYTH3-208ENST00000482460 MYO1BO43795 1136 aa28.35■■■□□ 2.13
CYTH3-208ENST00000482460 FRAT2O75474 233 aaPredicted RBP28.35■■■□□ 2.13
CYTH3-208ENST00000482460 CIAO1O76071 339 aa28.35■■■□□ 2.13
CYTH3-208ENST00000482460 SLC10A3P09131 477 aa28.35■■■□□ 2.13
CYTH3-208ENST00000482460 BCAMP50895 628 aa28.35■■■□□ 2.13
CYTH3-208ENST00000482460 PRMT6Q96LA8 375 aaPredicted RBP28.35■■■□□ 2.13
CYTH3-208ENST00000482460 IQSEC3Q9UPP2 1182 aaPredicted RBP28.35■■■□□ 2.13
CYTH3-208ENST00000482460 RBM5P52756 815 aaKnown RBP eCLIP28.34■■■□□ 2.13
CYTH3-208ENST00000482460 MOB2Q70IA6 237 aa28.34■■■□□ 2.13
CYTH3-208ENST00000482460 LPIN2Q92539 896 aa28.34■■■□□ 2.13
CYTH3-208ENST00000482460 SIL1Q9H173 461 aa28.34■■■□□ 2.13
CYTH3-208ENST00000482460 TTF2Q9UNY4 1162 aaKnown RBP28.34■■■□□ 2.13
CYTH3-208ENST00000482460 SLC5A1P13866 664 aa28.33■■■□□ 2.13
CYTH3-208ENST00000482460 TBC1D22AQ8WUA7 517 aa28.33■■■□□ 2.13
CYTH3-208ENST00000482460 DEFB129Q9H1M3 183 aa28.33■■■□□ 2.13
CYTH3-208ENST00000482460 SERPINA10Q9UK55 444 aa28.33■■■□□ 2.13
CYTH3-208ENST00000482460 COL1A1P02452 1464 aaPredicted RBP28.33■■■□□ 2.13
CYTH3-208ENST00000482460 ARAP2Q8WZ64 1704 aa28.32■■■□□ 2.12
CYTH3-208ENST00000482460 UBE2Q2LH0YL09 131 aa28.32■■■□□ 2.12
CYTH3-208ENST00000482460 KIF23Q02241 960 aaPredicted RBP28.32■■■□□ 2.12
CYTH3-208ENST00000482460 CHAF1AQ13111 956 aaPredicted RBP28.32■■■□□ 2.12
CYTH3-208ENST00000482460 TTLL12Q14166 644 aaPredicted RBP28.32■■■□□ 2.12
CYTH3-208ENST00000482460 CEP126Q9P2H0 1117 aa28.32■■■□□ 2.12
CYTH3-208ENST00000482460 TNNQ9UQP3 1299 aa28.32■■■□□ 2.12
CYTH3-208ENST00000482460 COPRSQ9NQ92 184 aa28.31■■■□□ 2.12
CYTH3-208ENST00000482460 PPP2R3BQ9Y5P8 575 aa28.31■■■□□ 2.12
CYTH3-208ENST00000482460 CLRN2A0PK11 232 aa28.3■■■□□ 2.12
CYTH3-208ENST00000482460 IL15P40933 162 aaPredicted RBP28.3■■■□□ 2.12
CYTH3-208ENST00000482460 RASAL3Q86YV0 1011 aa28.3■■■□□ 2.12
CYTH3-208ENST00000482460 CLUAP1Q96AJ1 413 aa28.3■■■□□ 2.12
CYTH3-208ENST00000482460 PA2G4Q9UQ80 394 aaKnown RBP28.3■■■□□ 2.12
CYTH3-208ENST00000482460 ZKSCAN2Q63HK3 967 aa28.29■■■□□ 2.12
CYTH3-208ENST00000482460 ARMC9Q7Z3E5 817 aa28.29■■■□□ 2.12
CYTH3-208ENST00000482460 TSKSQ9UJT2 592 aa28.29■■■□□ 2.12
CYTH3-208ENST00000482460 AOX1Q06278 1338 aa28.28■■■□□ 2.12
CYTH3-208ENST00000482460 ZBED9Q6R2W3 1325 aa28.28■■■□□ 2.12
CYTH3-208ENST00000482460 MTX1Q13505 466 aa28.28■■■□□ 2.12
CYTH3-208ENST00000482460 GRIK5Q16478 980 aa28.28■■■□□ 2.12
CYTH3-208ENST00000482460 VEZTQ9HBM0 779 aa28.28■■■□□ 2.12
CYTH3-208ENST00000482460 CRKP46108 304 aa28.27■■■□□ 2.12
CYTH3-208ENST00000482460 HDLBPQ00341 1268 aaKnown RBP28.27■■■□□ 2.12
CYTH3-208ENST00000482460 ATP2B3Q16720 1220 aa28.27■■■□□ 2.12
CYTH3-208ENST00000482460 DZIP1LQ8IYY4 767 aaKnown RBP28.27■■■□□ 2.12
CYTH3-208ENST00000482460 SRGAP3O43295 1099 aa28.26■■■□□ 2.11
CYTH3-208ENST00000482460 REM2Q8IYK8 340 aaPredicted RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms