RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 UBTFL1P0CB47 393 aaPredicted RBP11.35□□□□□ -0.59
VCP-206ENST00000480327 MS4A1P11836 297 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 USP17L1Q7RTZ2 530 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 PODNQ7Z5L7 613 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 BSDC1Q9NW68 430 aaPredicted RBP11.35□□□□□ -0.59
VCP-206ENST00000480327 CENPFP49454 3210 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 UTYO14607 1347 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
VCP-206ENST00000480327 OTOFQ9HC10 1997 aa11.34□□□□□ -0.59
VCP-206ENST00000480327 G3V3G9 751 aa11.34□□□□□ -0.59
VCP-206ENST00000480327 UBE2Q2LH0YL09 131 aa11.34□□□□□ -0.59
VCP-206ENST00000480327 HSP90B1P14625 803 aaKnown RBP11.34□□□□□ -0.59
VCP-206ENST00000480327 FOXO4P98177 505 aa11.34□□□□□ -0.59
VCP-206ENST00000480327 DCAF8Q5TAQ9 597 aa11.34□□□□□ -0.59
VCP-206ENST00000480327 KAZALD1Q96I82 304 aa11.34□□□□□ -0.59
VCP-206ENST00000480327 BICC1Q9H694 974 aaKnown RBP11.34□□□□□ -0.59
VCP-206ENST00000480327 WNT10BO00744 389 aa11.33□□□□□ -0.6
VCP-206ENST00000480327 SOX10P56693 466 aa11.33□□□□□ -0.6
VCP-206ENST00000480327 FKBP1BP68106 108 aa11.33□□□□□ -0.6
VCP-206ENST00000480327 MVPQ14764 893 aaKnown RBP11.33□□□□□ -0.6
VCP-206ENST00000480327 LMBR1LQ6UX01 489 aa11.33□□□□□ -0.6
VCP-206ENST00000480327 ZBED3Q96IU2 234 aaPredicted RBP11.33□□□□□ -0.6
VCP-206ENST00000480327 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
VCP-206ENST00000480327 PLA2G12BQ9BX93 195 aa11.33□□□□□ -0.6
VCP-206ENST00000480327 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
VCP-206ENST00000480327 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
VCP-206ENST00000480327 SSC5DA1L4H1 1573 aa11.33□□□□□ -0.6
VCP-206ENST00000480327 ARAP2Q8WZ64 1704 aa11.32□□□□□ -0.6
VCP-206ENST00000480327 MKI67P46013 3256 aaKnown RBP11.32□□□□□ -0.6
VCP-206ENST00000480327 ZBTB7BO15156 539 aaPredicted RBP11.32□□□□□ -0.6
VCP-206ENST00000480327 SASH1O94885 1247 aa11.32□□□□□ -0.6
VCP-206ENST00000480327 GNAI3P08754 354 aa11.32□□□□□ -0.6
VCP-206ENST00000480327 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
VCP-206ENST00000480327 SNAP23O00161 211 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 CSF1RP07333 972 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 ITGA6P23229 1130 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 IRX6P78412 446 aaPredicted RBP11.31□□□□□ -0.6
VCP-206ENST00000480327 STRIP1Q5VSL9 837 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 R3HDMLQ9H3Y0 253 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 PCDHAC2Q9Y5I4 1007 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 AOX1Q06278 1338 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 BRCA2P51587 3418 aa11.31□□□□□ -0.6
VCP-206ENST00000480327 ANKRD18BA2A2Z9 1011 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 TBC1D8O95759 1140 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 GNAI2P04899 355 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 TM4SF4P48230 202 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 IFIT5Q13325 482 aaKnown RBP11.3□□□□□ -0.6
VCP-206ENST00000480327 CCDC57Q2TAC2 916 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 CTU1Q7Z7A3 348 aaKnown RBP11.3□□□□□ -0.6
VCP-206ENST00000480327 CERS5Q8N5B7 392 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
VCP-206ENST00000480327 ZNF594Q96JF6 807 aaPredicted RBP11.3□□□□□ -0.6
VCP-206ENST00000480327 CRBNQ96SW2 442 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 COA1Q9GZY4 146 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 DDX19BQ9UMR2 479 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 ZNF804BA4D1E1 1349 aa11.3□□□□□ -0.6
VCP-206ENST00000480327 RBBP6Q7Z6E9 1792 aaKnown RBP11.29□□□□□ -0.6
VCP-206ENST00000480327 CENPBP07199 599 aaPredicted RBP11.29□□□□□ -0.6
VCP-206ENST00000480327 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
VCP-206ENST00000480327 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
VCP-206ENST00000480327 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
VCP-206ENST00000480327 KIAA0825Q8IV33 1275 aa11.29□□□□□ -0.6
VCP-206ENST00000480327 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
VCP-206ENST00000480327 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
VCP-206ENST00000480327 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
VCP-206ENST00000480327 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
VCP-206ENST00000480327 LEMD3Q9Y2U8 911 aa11.29□□□□□ -0.6
VCP-206ENST00000480327 MYO3BQ8WXR4 1341 aa11.29□□□□□ -0.6
VCP-206ENST00000480327 IGHMBP2P38935 993 aaKnown RBP11.28□□□□□ -0.6
VCP-206ENST00000480327 GTF2IP78347 998 aa11.28□□□□□ -0.6
VCP-206ENST00000480327 CHRNDQ07001 517 aa11.28□□□□□ -0.6
VCP-206ENST00000480327 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
VCP-206ENST00000480327 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
VCP-206ENST00000480327 TTLL5Q6EMB2 1281 aa11.28□□□□□ -0.6
VCP-206ENST00000480327 KLHDC4Q8TBB5 520 aa11.28□□□□□ -0.6
VCP-206ENST00000480327 TAF5LO75529 589 aa11.27□□□□□ -0.61
VCP-206ENST00000480327 PRKG1Q13976 671 aa11.27□□□□□ -0.61
VCP-206ENST00000480327 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.61
VCP-206ENST00000480327 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
VCP-206ENST00000480327 CD209Q9NNX6 404 aa11.27□□□□□ -0.61
VCP-206ENST00000480327 COL1A1P02452 1464 aaPredicted RBP11.26□□□□□ -0.61
VCP-206ENST00000480327 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 GPR25O00155 361 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 SRGAP3O43295 1099 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
VCP-206ENST00000480327 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
VCP-206ENST00000480327 SPRYD7Q5W111 196 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 C15orf52Q6ZUT6 534 aaKnown RBP11.26□□□□□ -0.61
VCP-206ENST00000480327 OGFOD1Q8N543 542 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 CFHR5Q9BXR6 569 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 PUS3Q9BZE2 481 aaKnown RBP11.26□□□□□ -0.61
VCP-206ENST00000480327 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 SIL1Q9H173 461 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
VCP-206ENST00000480327 PA2G4Q9UQ80 394 aaKnown RBP11.26□□□□□ -0.61
VCP-206ENST00000480327 ZSWIM8A7E2V4 1837 aa11.25□□□□□ -0.61
VCP-206ENST00000480327 RFX5P48382 616 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms