RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	ZIC5	Q96T25	663 aa		18.86	■□□□□ 0.61
CCNL1-222	ENST00000479596	PCDHAC2	Q9Y5I4	1007 aa		18.86	■□□□□ 0.61
CCNL1-222	ENST00000479596	KIF16B	Q96L93	1317 aa		18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	FAM155A	B1AL88	458 aa	Predicted RBP	18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	HSPA8	P11142	646 aa	Known RBP	18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	PTPN12	Q05209	780 aa	Known RBP	18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	METTL24	Q5JXM2	366 aa		18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	C2orf69	Q8N8R5	385 aa		18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	ARHGAP45	Q92619	1136 aa		18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	HDAC9	Q9UKV0	1011 aa		18.85	■□□□□ 0.61
CCNL1-222	ENST00000479596	PAPPA2	Q9BXP8	1791 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	PDE8B	O95263	885 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	UBTFL1	P0CB47	393 aa	Predicted RBP	18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	HIBADH	P31937	336 aa	Known RBP	18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	PRAMEF18	Q5VWM3	479 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	RGMB	Q6NW40	437 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	FBXO33	Q7Z6M2	555 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	MTMR14	Q8NCE2	650 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	MEIS3	Q99687	375 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	PRDM10	Q9NQV6	1147 aa		18.84	■□□□□ 0.61
CCNL1-222	ENST00000479596	ARAP2	Q8WZ64	1704 aa		18.83	■□□□□ 0.61
CCNL1-222	ENST00000479596	AOX1	Q06278	1338 aa		18.83	■□□□□ 0.61
CCNL1-222	ENST00000479596		F8W031	263 aa	Predicted RBP	18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	EYA2	O00167	538 aa		18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	BCAR3	O75815	825 aa		18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	LBX1	P52954	281 aa		18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	INTS3	Q68E01	1043 aa	Known RBP	18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	ATG9A	Q7Z3C6	839 aa		18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	TNS4	Q8IZW8	715 aa		18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	TNN	Q9UQP3	1299 aa		18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	LRRFIP2	Q9Y608	721 aa	Known RBP	18.83	■□□□□ 0.6
CCNL1-222	ENST00000479596	FGFR2	P21802	821 aa		18.82	■□□□□ 0.6
CCNL1-222	ENST00000479596	SPDYE2B	A6NHP3	402 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	SPDYE6	P0CI01	402 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	TRIM27	P14373	513 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	NOG	Q13253	232 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	DLGAP5	Q15398	846 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	CFAP100	Q494V2	611 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	MFSD14B	Q5SR56	506 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	MOB2	Q70IA6	237 aa		18.81	■□□□□ 0.6
CCNL1-222	ENST00000479596	SLC10A3	P09131	477 aa		18.8	■□□□□ 0.6
CCNL1-222	ENST00000479596	ZNF157	P51786	506 aa	Predicted RBP	18.8	■□□□□ 0.6
CCNL1-222	ENST00000479596	FKBP1B	P68106	108 aa		18.8	■□□□□ 0.6
CCNL1-222	ENST00000479596	PUM3	Q15397	648 aa	Known RBP	18.8	■□□□□ 0.6
CCNL1-222	ENST00000479596	APOBEC3F	Q8IUX4	373 aa	Known RBP	18.8	■□□□□ 0.6
CCNL1-222	ENST00000479596	PRMT6	Q96LA8	375 aa	Predicted RBP	18.8	■□□□□ 0.6
CCNL1-222	ENST00000479596	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.8	■□□□□ 0.6
CCNL1-222	ENST00000479596	ECM29	Q5VYK3	1845 aa		18.79	■□□□□ 0.6
CCNL1-222	ENST00000479596	BCAM	P50895	628 aa		18.79	■□□□□ 0.6
CCNL1-222	ENST00000479596	GRIK5	Q16478	980 aa		18.79	■□□□□ 0.6
CCNL1-222	ENST00000479596	RASAL3	Q86YV0	1011 aa		18.79	■□□□□ 0.6
CCNL1-222	ENST00000479596	CCDC102A	Q96A19	550 aa		18.79	■□□□□ 0.6
CCNL1-222	ENST00000479596	COL1A1	P02452	1464 aa	Predicted RBP	18.78	■□□□□ 0.6
CCNL1-222	ENST00000479596	CIAO1	O76071	339 aa		18.78	■□□□□ 0.6
CCNL1-222	ENST00000479596	ATF7IP	Q6VMQ6	1270 aa		18.78	■□□□□ 0.6
CCNL1-222	ENST00000479596	SIL1	Q9H173	461 aa		18.78	■□□□□ 0.6
CCNL1-222	ENST00000479596	TSKS	Q9UJT2	592 aa		18.78	■□□□□ 0.6
CCNL1-222	ENST00000479596	SSC5D	A1L4H1	1573 aa		18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	CLRN2	A0PK11	232 aa		18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	CAVIN4	Q5BKX8	364 aa		18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	VPS37D	Q86XT2	251 aa		18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	BEGAIN	Q9BUH8	593 aa		18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	DEFB129	Q9H1M3	183 aa		18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	FBXO3	Q9UK99	471 aa		18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	TTF2	Q9UNY4	1162 aa	Known RBP	18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	PA2G4	Q9UQ80	394 aa	Known RBP	18.77	■□□□□ 0.6
CCNL1-222	ENST00000479596	UBE2Q2L	H0YL09	131 aa		18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	IPO8	O15397	1037 aa	Known RBP	18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	IFIT1	P09914	478 aa	Known RBP	18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	KIF23	Q02241	960 aa	Predicted RBP	18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	CHAF1A	Q13111	956 aa	Predicted RBP	18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	LPIN2	Q92539	896 aa		18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	FRAT1	Q92837	279 aa	Predicted RBP	18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	COPRS	Q9NQ92	184 aa		18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	SERPINA10	Q9UK55	444 aa		18.76	■□□□□ 0.59
CCNL1-222	ENST00000479596	ZBED9	Q6R2W3	1325 aa		18.75	■□□□□ 0.59
CCNL1-222	ENST00000479596	CA12	O43570	354 aa		18.75	■□□□□ 0.59
CCNL1-222	ENST00000479596	GNAI3	P08754	354 aa		18.75	■□□□□ 0.59
CCNL1-222	ENST00000479596	MTX1	Q13505	466 aa		18.75	■□□□□ 0.59
CCNL1-222	ENST00000479596	CLUAP1	Q96AJ1	413 aa		18.75	■□□□□ 0.59
CCNL1-222	ENST00000479596	HDAC5	Q9UQL6	1122 aa		18.75	■□□□□ 0.59
CCNL1-222	ENST00000479596	SLC5A1	P13866	664 aa		18.74	■□□□□ 0.59
CCNL1-222	ENST00000479596	RBM5	P52756	815 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
CCNL1-222	ENST00000479596	FZD1	Q9UP38	647 aa		18.74	■□□□□ 0.59
CCNL1-222	ENST00000479596	MYO1B	O43795	1136 aa		18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	NF2	P35240	595 aa		18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	IL15	P40933	162 aa	Predicted RBP	18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	CRK	P46108	304 aa		18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	SPDYE2	Q495Y8	402 aa		18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	DZIP1L	Q8IYY4	767 aa	Known RBP	18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	TBC1D22A	Q8WUA7	517 aa		18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	VEZT	Q9HBM0	779 aa		18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	PPP2R3B	Q9Y5P8	575 aa		18.73	■□□□□ 0.59
CCNL1-222	ENST00000479596	FRAT2	O75474	233 aa	Predicted RBP	18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	PRKG1	Q13976	671 aa		18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	TTLL12	Q14166	644 aa	Predicted RBP	18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	ATP2B3	Q16720	1220 aa		18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	ZKSCAN2	Q63HK3	967 aa		18.72	■□□□□ 0.59
CCNL1-222	ENST00000479596	TMEM57	Q8N5G2	664 aa		18.72	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms