RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PUS3Q9BZE2 481 aaKnown RBP18.03■□□□□ 0.48
ATG4B-218ENST00000479554 MROH5Q6ZUA9 1318 aa18.02■□□□□ 0.48
ATG4B-218ENST00000479554 NF2P35240 595 aa18.02■□□□□ 0.48
ATG4B-218ENST00000479554 FKBP1AP62942 108 aaKnown RBP18.02■□□□□ 0.48
ATG4B-218ENST00000479554 KIF23Q02241 960 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-218ENST00000479554 DLGAP5Q15398 846 aa18.02■□□□□ 0.48
ATG4B-218ENST00000479554 PRAMEF18Q5VWM3 479 aa18.02■□□□□ 0.48
ATG4B-218ENST00000479554 ANKRD44Q8N8A2 993 aa18.02■□□□□ 0.48
ATG4B-218ENST00000479554 ZBED3Q96IU2 234 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-218ENST00000479554 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
ATG4B-218ENST00000479554 F8W031 263 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-218ENST00000479554 TTLL12Q14166 644 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-218ENST00000479554 RASAL3Q86YV0 1011 aa18.01■□□□□ 0.47
ATG4B-218ENST00000479554 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
ATG4B-218ENST00000479554 JAG2Q9Y219 1238 aa18.01■□□□□ 0.47
ATG4B-218ENST00000479554 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-218ENST00000479554 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
ATG4B-218ENST00000479554 MOB2Q70IA6 237 aa18■□□□□ 0.47
ATG4B-218ENST00000479554 USP44Q9H0E7 712 aa18■□□□□ 0.47
ATG4B-218ENST00000479554 RIPOR2Q9Y4F9 1068 aa18■□□□□ 0.47
ATG4B-218ENST00000479554 UBE2Q2LH0YL09 131 aa17.99■□□□□ 0.47
ATG4B-218ENST00000479554 HIBADHP31937 336 aaKnown RBP17.99■□□□□ 0.47
ATG4B-218ENST00000479554 GYG1P46976 350 aa17.99■□□□□ 0.47
ATG4B-218ENST00000479554 METTL24Q5JXM2 366 aa17.99■□□□□ 0.47
ATG4B-218ENST00000479554 MTMR14Q8NCE2 650 aa17.99■□□□□ 0.47
ATG4B-218ENST00000479554 SAGE1Q9NXZ1 904 aa17.99■□□□□ 0.47
ATG4B-218ENST00000479554 ECM29Q5VYK3 1845 aa17.99■□□□□ 0.47
ATG4B-218ENST00000479554 FAM205AQ6ZU69 1335 aa17.98■□□□□ 0.47
ATG4B-218ENST00000479554 ARAP2Q8WZ64 1704 aa17.98■□□□□ 0.47
ATG4B-218ENST00000479554 MYO1BO43795 1136 aa17.98■□□□□ 0.47
ATG4B-218ENST00000479554 CFAP100Q494V2 611 aa17.98■□□□□ 0.47
ATG4B-218ENST00000479554 LRRC24Q50LG9 513 aa17.98■□□□□ 0.47
ATG4B-218ENST00000479554 TDRD7Q8NHU6 1098 aaKnown RBP17.98■□□□□ 0.47
ATG4B-218ENST00000479554 ABHD8Q96I13 439 aa17.98■□□□□ 0.47
ATG4B-218ENST00000479554 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
ATG4B-218ENST00000479554 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
ATG4B-218ENST00000479554 MFSD14BQ5SR56 506 aa17.97■□□□□ 0.47
ATG4B-218ENST00000479554 REM2Q8IYK8 340 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-218ENST00000479554 FAM84BQ96KN1 310 aaPredicted RBP17.97■□□□□ 0.47
ATG4B-218ENST00000479554 PCDHAC2Q9Y5I4 1007 aa17.97■□□□□ 0.47
ATG4B-218ENST00000479554 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
ATG4B-218ENST00000479554 ARMC9Q7Z3E5 817 aa17.96■□□□□ 0.47
ATG4B-218ENST00000479554 VPS37DQ86XT2 251 aa17.96■□□□□ 0.47
ATG4B-218ENST00000479554 KLHDC4Q8TBB5 520 aa17.96■□□□□ 0.47
ATG4B-218ENST00000479554 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
ATG4B-218ENST00000479554 DEFB129Q9H1M3 183 aa17.96■□□□□ 0.47
ATG4B-218ENST00000479554 AKAP11Q9UKA4 1901 aa17.96■□□□□ 0.47
ATG4B-218ENST00000479554 CLRN2A0PK11 232 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 TRPA1O75762 1119 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 PDE8BO95263 885 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 PRKG1Q13976 671 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 CAVIN4Q5BKX8 364 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 VGLL2Q8N8G2 317 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 API5Q9BZZ5 524 aaKnown RBP17.95■□□□□ 0.46
ATG4B-218ENST00000479554 VEZTQ9HBM0 779 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 RNF186Q9NXI6 227 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 NOB1Q9ULX3 412 aaKnown RBP17.95■□□□□ 0.46
ATG4B-218ENST00000479554 PPP2R3BQ9Y5P8 575 aa17.95■□□□□ 0.46
ATG4B-218ENST00000479554 CASP8AP2Q9UKL3 1982 aa17.94■□□□□ 0.46
ATG4B-218ENST00000479554 UBTFL1P0CB47 393 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-218ENST00000479554 FBXO33Q7Z6M2 555 aa17.94■□□□□ 0.46
ATG4B-218ENST00000479554 PRMT6Q96LA8 375 aaPredicted RBP17.94■□□□□ 0.46
ATG4B-218ENST00000479554 TTF2Q9UNY4 1162 aaKnown RBP17.94■□□□□ 0.46
ATG4B-218ENST00000479554 FRAT2O75474 233 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-218ENST00000479554 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-218ENST00000479554 PUM3Q15397 648 aaKnown RBP17.93■□□□□ 0.46
ATG4B-218ENST00000479554 SERPINA10Q9UK55 444 aa17.93■□□□□ 0.46
ATG4B-218ENST00000479554 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
ATG4B-218ENST00000479554 IQSEC3Q9UPP2 1182 aaPredicted RBP17.93■□□□□ 0.46
ATG4B-218ENST00000479554 SSC5DA1L4H1 1573 aa17.92■□□□□ 0.46
ATG4B-218ENST00000479554 IFIT1P09914 478 aaKnown RBP17.92■□□□□ 0.46
ATG4B-218ENST00000479554 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
ATG4B-218ENST00000479554 PTPN12Q05209 780 aaKnown RBP17.92■□□□□ 0.46
ATG4B-218ENST00000479554 AOX1Q06278 1338 aa17.92■□□□□ 0.46
ATG4B-218ENST00000479554 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
ATG4B-218ENST00000479554 EYA2O00167 538 aa17.91■□□□□ 0.46
ATG4B-218ENST00000479554 RARSP54136 660 aaKnown RBP17.91■□□□□ 0.46
ATG4B-218ENST00000479554 MKRN3Q13064 507 aaKnown RBP17.91■□□□□ 0.46
ATG4B-218ENST00000479554 DGKZQ13574 1117 aa17.91■□□□□ 0.46
ATG4B-218ENST00000479554 TBC1D22AQ8WUA7 517 aa17.91■□□□□ 0.46
ATG4B-218ENST00000479554 MCOLN1Q9GZU1 580 aa17.91■□□□□ 0.46
ATG4B-218ENST00000479554 PPP1R12BO60237 982 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-218ENST00000479554 BCAMP50895 628 aa17.9■□□□□ 0.46
ATG4B-218ENST00000479554 TNFAIP1Q13829 316 aa17.9■□□□□ 0.46
ATG4B-218ENST00000479554 SUPT20HL1Q3ZLR7 823 aa17.9■□□□□ 0.46
ATG4B-218ENST00000479554 SPDYE2Q495Y8 402 aa17.9■□□□□ 0.46
ATG4B-218ENST00000479554 LDLRAD1Q5T700 205 aa17.9■□□□□ 0.46
ATG4B-218ENST00000479554 FZD1Q9UP38 647 aa17.9■□□□□ 0.46
ATG4B-218ENST00000479554 HDAC5Q9UQL6 1122 aa17.9■□□□□ 0.46
ATG4B-218ENST00000479554 SLC5A1P13866 664 aa17.89■□□□□ 0.45
ATG4B-218ENST00000479554 FGFR2P21802 821 aa17.89■□□□□ 0.45
ATG4B-218ENST00000479554 CRKP46108 304 aa17.89■□□□□ 0.45
ATG4B-218ENST00000479554 SREBF2Q12772 1141 aa17.89■□□□□ 0.45
ATG4B-218ENST00000479554 RASA3Q14644 834 aa17.89■□□□□ 0.45
ATG4B-218ENST00000479554 TDRD3Q9H7E2 651 aaKnown RBP17.89■□□□□ 0.45
ATG4B-218ENST00000479554 ZNF70Q9UC06 446 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-218ENST00000479554 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.45
ATG4B-218ENST00000479554 CCDC85CA6NKD9 419 aa17.88■□□□□ 0.45
ATG4B-218ENST00000479554 GRIK5Q16478 980 aa17.88■□□□□ 0.45
ATG4B-218ENST00000479554 MAP3K11Q16584 847 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms