RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ZBED3Q96IU2 234 aaPredicted RBP20.33■□□□□ 0.85
COL1A1-205ENST00000476387 SAGE1Q9NXZ1 904 aa20.33■□□□□ 0.85
COL1A1-205ENST00000476387 SASH1O94885 1247 aa20.32■□□□□ 0.84
COL1A1-205ENST00000476387 KIF23Q02241 960 aaPredicted RBP20.32■□□□□ 0.84
COL1A1-205ENST00000476387 UBE4AQ14139 1066 aa20.32■□□□□ 0.84
COL1A1-205ENST00000476387 RABL6Q3YEC7 729 aaPredicted RBP20.32■□□□□ 0.84
COL1A1-205ENST00000476387 APOBEC3FQ8IUX4 373 aaKnown RBP20.32■□□□□ 0.84
COL1A1-205ENST00000476387 REM2Q8IYK8 340 aaPredicted RBP20.32■□□□□ 0.84
COL1A1-205ENST00000476387 BICC1Q9H694 974 aaKnown RBP20.32■□□□□ 0.84
COL1A1-205ENST00000476387 PLIN1O60240 522 aa20.31■□□□□ 0.84
COL1A1-205ENST00000476387 NF2P35240 595 aa20.31■□□□□ 0.84
COL1A1-205ENST00000476387 CERS5Q8N5B7 392 aa20.31■□□□□ 0.84
COL1A1-205ENST00000476387 MTMR14Q8NCE2 650 aa20.31■□□□□ 0.84
COL1A1-205ENST00000476387 ABHD8Q96I13 439 aa20.31■□□□□ 0.84
COL1A1-205ENST00000476387 SCAF8Q9UPN6 1271 aaKnown RBP20.31■□□□□ 0.84
COL1A1-205ENST00000476387 DLGAP5Q15398 846 aa20.3■□□□□ 0.84
COL1A1-205ENST00000476387 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
COL1A1-205ENST00000476387 USP44Q9H0E7 712 aa20.3■□□□□ 0.84
COL1A1-205ENST00000476387 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
COL1A1-205ENST00000476387 MROH5Q6ZUA9 1318 aa20.29■□□□□ 0.84
COL1A1-205ENST00000476387 PRAMEF18Q5VWM3 479 aa20.29■□□□□ 0.84
COL1A1-205ENST00000476387 ANKRD44Q8N8A2 993 aa20.29■□□□□ 0.84
COL1A1-205ENST00000476387 ARHGAP45Q92619 1136 aa20.29■□□□□ 0.84
COL1A1-205ENST00000476387 RIPOR2Q9Y4F9 1068 aa20.29■□□□□ 0.84
COL1A1-205ENST00000476387 FAM205AQ6ZU69 1335 aa20.28■□□□□ 0.84
COL1A1-205ENST00000476387 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
COL1A1-205ENST00000476387 PUS3Q9BZE2 481 aaKnown RBP20.28■□□□□ 0.84
COL1A1-205ENST00000476387 UBE2Q2LH0YL09 131 aa20.27■□□□□ 0.84
COL1A1-205ENST00000476387 UBTFL1P0CB47 393 aaPredicted RBP20.27■□□□□ 0.84
COL1A1-205ENST00000476387 HIBADHP31937 336 aaKnown RBP20.27■□□□□ 0.84
COL1A1-205ENST00000476387 MOB2Q70IA6 237 aa20.27■□□□□ 0.84
COL1A1-205ENST00000476387 TDRD7Q8NHU6 1098 aaKnown RBP20.27■□□□□ 0.84
COL1A1-205ENST00000476387 CSRNP1Q96S65 589 aa20.27■□□□□ 0.84
COL1A1-205ENST00000476387 CASP8AP2Q9UKL3 1982 aa20.26■□□□□ 0.83
COL1A1-205ENST00000476387 TTLL12Q14166 644 aaPredicted RBP20.26■□□□□ 0.83
COL1A1-205ENST00000476387 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
COL1A1-205ENST00000476387 RNF186Q9NXI6 227 aa20.26■□□□□ 0.83
COL1A1-205ENST00000476387 HDAC5Q9UQL6 1122 aa20.26■□□□□ 0.83
COL1A1-205ENST00000476387 PPP2R3BQ9Y5P8 575 aa20.26■□□□□ 0.83
COL1A1-205ENST00000476387 SPDYE2BA6NHP3 402 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 MYO1BO43795 1136 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 BCAR3O75815 825 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 SPDYE6P0CI01 402 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 ARMC9Q7Z3E5 817 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 FAM84BQ96KN1 310 aaPredicted RBP20.25■□□□□ 0.83
COL1A1-205ENST00000476387 DEFB129Q9H1M3 183 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 AKAP11Q9UKA4 1901 aa20.25■□□□□ 0.83
COL1A1-205ENST00000476387 F8W031 263 aaPredicted RBP20.24■□□□□ 0.83
COL1A1-205ENST00000476387 TRPA1O75762 1119 aa20.24■□□□□ 0.83
COL1A1-205ENST00000476387 GYG1P46976 350 aa20.24■□□□□ 0.83
COL1A1-205ENST00000476387 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
COL1A1-205ENST00000476387 TRIM27P14373 513 aa20.23■□□□□ 0.83
COL1A1-205ENST00000476387 LRRC24Q50LG9 513 aa20.23■□□□□ 0.83
COL1A1-205ENST00000476387 METTL24Q5JXM2 366 aa20.23■□□□□ 0.83
COL1A1-205ENST00000476387 MFSD14BQ5SR56 506 aa20.23■□□□□ 0.83
COL1A1-205ENST00000476387 ATF7IPQ6VMQ6 1270 aa20.23■□□□□ 0.83
COL1A1-205ENST00000476387 JAG2Q9Y219 1238 aa20.23■□□□□ 0.83
COL1A1-205ENST00000476387 INTS3Q68E01 1043 aaKnown RBP20.22■□□□□ 0.83
COL1A1-205ENST00000476387 FBXO33Q7Z6M2 555 aa20.22■□□□□ 0.83
COL1A1-205ENST00000476387 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
COL1A1-205ENST00000476387 PRMT6Q96LA8 375 aaPredicted RBP20.22■□□□□ 0.83
COL1A1-205ENST00000476387 MCOLN1Q9GZU1 580 aa20.22■□□□□ 0.83
COL1A1-205ENST00000476387 SERPINA10Q9UK55 444 aa20.22■□□□□ 0.83
COL1A1-205ENST00000476387 PDE8BO95263 885 aa20.21■□□□□ 0.83
COL1A1-205ENST00000476387 CAVIN4Q5BKX8 364 aa20.21■□□□□ 0.83
COL1A1-205ENST00000476387 LDLRAD1Q5T700 205 aa20.21■□□□□ 0.83
COL1A1-205ENST00000476387 ZKSCAN2Q63HK3 967 aa20.21■□□□□ 0.83
COL1A1-205ENST00000476387 VPS37DQ86XT2 251 aa20.21■□□□□ 0.83
COL1A1-205ENST00000476387 PCDHAC2Q9Y5I4 1007 aa20.21■□□□□ 0.83
COL1A1-205ENST00000476387 MYH13Q9UKX3 1938 aa20.2■□□□□ 0.82
COL1A1-205ENST00000476387 GNAI3P08754 354 aa20.2■□□□□ 0.82
COL1A1-205ENST00000476387 PTPN12Q05209 780 aaKnown RBP20.2■□□□□ 0.82
COL1A1-205ENST00000476387 MAP3K11Q16584 847 aa20.2■□□□□ 0.82
COL1A1-205ENST00000476387 MEIS3Q99687 375 aa20.2■□□□□ 0.82
COL1A1-205ENST00000476387 TTF2Q9UNY4 1162 aaKnown RBP20.2■□□□□ 0.82
COL1A1-205ENST00000476387 LRRFIP2Q9Y608 721 aaKnown RBP20.2■□□□□ 0.82
COL1A1-205ENST00000476387 ARAP2Q8WZ64 1704 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 CLRN2A0PK11 232 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 UNCXA6NJT0 531 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 TM4SF4P48230 202 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 RBM5P52756 815 aaKnown RBP eCLIP20.19■□□□□ 0.82
COL1A1-205ENST00000476387 DGKZQ13574 1117 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 SUPT20HL1Q3ZLR7 823 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 KLHDC4Q8TBB5 520 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 TBC1D22AQ8WUA7 517 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
COL1A1-205ENST00000476387 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
COL1A1-205ENST00000476387 PPP1R12BO60237 982 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-205ENST00000476387 RFX5P48382 616 aaPredicted RBP20.18■□□□□ 0.82
COL1A1-205ENST00000476387 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
COL1A1-205ENST00000476387 PRKG1Q13976 671 aa20.18■□□□□ 0.82
COL1A1-205ENST00000476387 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
COL1A1-205ENST00000476387 VEZTQ9HBM0 779 aa20.18■□□□□ 0.82
COL1A1-205ENST00000476387 SSC5DA1L4H1 1573 aa20.17■□□□□ 0.82
COL1A1-205ENST00000476387 CCDC85CA6NKD9 419 aa20.17■□□□□ 0.82
COL1A1-205ENST00000476387 EYA2O00167 538 aa20.17■□□□□ 0.82
COL1A1-205ENST00000476387 FGFR2P21802 821 aa20.17■□□□□ 0.82
COL1A1-205ENST00000476387 SREBF2Q12772 1141 aa20.17■□□□□ 0.82
COL1A1-205ENST00000476387 SPDYE2Q495Y8 402 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms