RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 SOX17Q9H6I2 414 aaPredicted RBP7.74□□□□□ -1.17
GPCPD1-204ENST00000473797 C1orf115Q9H7X2 142 aa7.74□□□□□ -1.17
GPCPD1-204ENST00000473797 HIF3AQ9Y2N7 669 aa7.74□□□□□ -1.17
GPCPD1-204ENST00000473797 HMX2A2RU54 273 aa7.73□□□□□ -1.17
GPCPD1-204ENST00000473797 COBLO75128 1261 aa7.73□□□□□ -1.17
GPCPD1-204ENST00000473797 PHACTR2O75167 634 aa7.73□□□□□ -1.17
GPCPD1-204ENST00000473797 GJD3Q8N144 294 aa7.73□□□□□ -1.17
GPCPD1-204ENST00000473797 DBNDD2Q9BQY9 259 aa7.73□□□□□ -1.17
GPCPD1-204ENST00000473797 PRR19A6NJB7 356 aa7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 TGFB1P01137 390 aa7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 SSTR4P31391 388 aa7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 PREPP48147 710 aa7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 PEAR1Q5VY43 1037 aaPredicted RBP7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 HGSNATQ68CP4 663 aa7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 INTS5Q6P9B9 1019 aaKnown RBP7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 RUSC1Q9BVN2 902 aa7.72□□□□□ -1.17
GPCPD1-204ENST00000473797 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
GPCPD1-204ENST00000473797 NLRP12P59046 1061 aa7.71□□□□□ -1.18
GPCPD1-204ENST00000473797 IKBKEQ14164 716 aa7.71□□□□□ -1.18
GPCPD1-204ENST00000473797 TMPRSS13Q9BYE2 586 aa7.71□□□□□ -1.18
GPCPD1-204ENST00000473797 SUGCTQ9HAC7 445 aa7.71□□□□□ -1.18
GPCPD1-204ENST00000473797 ZFYVE28Q9HCC9 887 aa7.71□□□□□ -1.18
GPCPD1-204ENST00000473797 FOXD3Q9UJU5 478 aaPredicted RBP7.71□□□□□ -1.18
GPCPD1-204ENST00000473797 SART1O43290 800 aaKnown RBP7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 BMP3P12645 472 aa7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 BEND4Q6ZU67 534 aa7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 SMG8Q8ND04 991 aaKnown RBP7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 SLC7A3Q8WY07 619 aa7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 KRTAP4-12Q9BQ66 201 aa7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 EGFL7Q9UHF1 273 aa7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 AMOTL2Q9Y2J4 779 aa7.7□□□□□ -1.18
GPCPD1-204ENST00000473797 COL17A1Q9UMD9 1497 aaPredicted RBP7.69□□□□□ -1.18
GPCPD1-204ENST00000473797 TIAF1O95411 115 aa7.69□□□□□ -1.18
GPCPD1-204ENST00000473797 ESRRAP11474 423 aaPredicted RBP7.69□□□□□ -1.18
GPCPD1-204ENST00000473797 SPINK2P20155 84 aa7.69□□□□□ -1.18
GPCPD1-204ENST00000473797 AAMPQ13685 434 aa7.69□□□□□ -1.18
GPCPD1-204ENST00000473797 FDX2Q6P4F2 183 aa7.69□□□□□ -1.18
GPCPD1-204ENST00000473797 CCDC87Q9NVE4 849 aa7.69□□□□□ -1.18
GPCPD1-204ENST00000473797 GRIK1P39086 918 aa7.68□□□□□ -1.18
GPCPD1-204ENST00000473797 ECM1Q16610 540 aa7.68□□□□□ -1.18
GPCPD1-204ENST00000473797 MCTP1Q6DN14 999 aa7.68□□□□□ -1.18
GPCPD1-204ENST00000473797 DTX1Q86Y01 620 aa7.68□□□□□ -1.18
GPCPD1-204ENST00000473797 LOC100289279A0A1B0GTE1 492 aa7.67□□□□□ -1.18
GPCPD1-204ENST00000473797 EXOSC6Q5RKV6 272 aaKnown RBP7.67□□□□□ -1.18
GPCPD1-204ENST00000473797 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
GPCPD1-204ENST00000473797 LATS2Q9NRM7 1088 aa7.67□□□□□ -1.18
GPCPD1-204ENST00000473797 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
GPCPD1-204ENST00000473797 CARNS1A5YM72 827 aa7.66□□□□□ -1.18
GPCPD1-204ENST00000473797 ICMTO60725 284 aa7.66□□□□□ -1.18
GPCPD1-204ENST00000473797 DLGAP3O95886 979 aa7.66□□□□□ -1.18
GPCPD1-204ENST00000473797 NUTM2GQ5VZR2 741 aa7.66□□□□□ -1.18
GPCPD1-204ENST00000473797 GALNT12Q8IXK2 581 aa7.66□□□□□ -1.18
GPCPD1-204ENST00000473797 SHKBP1Q8TBC3 707 aa7.66□□□□□ -1.18
GPCPD1-204ENST00000473797 CYP4F12Q9HCS2 524 aa7.66□□□□□ -1.18
GPCPD1-204ENST00000473797 MAP4P27816 1152 aaKnown RBP7.65□□□□□ -1.18
GPCPD1-204ENST00000473797 CCNJLQ8IV13 435 aa7.65□□□□□ -1.18
GPCPD1-204ENST00000473797 KCNF1Q9H3M0 494 aa7.65□□□□□ -1.18
GPCPD1-204ENST00000473797 ABL1P00519 1130 aa7.64□□□□□ -1.19
GPCPD1-204ENST00000473797 C12orf50Q8NA57 414 aaPredicted RBP7.64□□□□□ -1.19
GPCPD1-204ENST00000473797 ASAP3Q8TDY4 903 aa7.64□□□□□ -1.19
GPCPD1-204ENST00000473797 TCF12Q99081 682 aa7.64□□□□□ -1.19
GPCPD1-204ENST00000473797 A0A096LPE4 126 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 A0A1W2PP55 124 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 A0A1W2PPZ6 126 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 GAS2O43903 313 aaKnown RBP7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 ADAMTS4O75173 837 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 GP2P55259 537 aaKnown RBP7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 ZNF211Q13398 564 aaPredicted RBP7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 CPSF6Q16630 551 aaKnown RBP eCLIP7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 SGO2Q562F6 1265 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 KIAA0319Q5VV43 1072 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 B4GALNT3Q6L9W6 998 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 ANO2Q9NQ90 1003 aa7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 OAS3Q9Y6K5 1087 aaKnown RBP7.63□□□□□ -1.19
GPCPD1-204ENST00000473797 METTL12A8MUP2 240 aa7.62□□□□□ -1.19
GPCPD1-204ENST00000473797 ZNF423Q2M1K9 1284 aa7.62□□□□□ -1.19
GPCPD1-204ENST00000473797 EZH1Q92800 747 aaPredicted RBP7.62□□□□□ -1.19
GPCPD1-204ENST00000473797 USP26Q9BXU7 913 aa7.62□□□□□ -1.19
GPCPD1-204ENST00000473797 CLEC4MQ9H2X3 399 aaPredicted RBP7.62□□□□□ -1.19
GPCPD1-204ENST00000473797 WDR64B1ANS9 1081 aa7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 POLR3DP05423 398 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 NEFLP07196 543 aa7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 GRIA4P48058 902 aa7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 GSTM4Q03013 218 aa7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 SOX4Q06945 474 aaPredicted RBP7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 CITED4Q96RK1 184 aa7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 PIM2Q9P1W9 311 aa7.61□□□□□ -1.19
GPCPD1-204ENST00000473797 WNT11O96014 354 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 F13BP05160 661 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 ARHGAP4P98171 946 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 PCDH1Q08174 1060 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 KRTAP1-3Q8IUG1 177 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 C2CD4AQ8NCU7 369 aaPredicted RBP7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 GIMAP7Q8NHV1 300 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 MFSD14AQ96MC6 490 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 FMNL2Q96PY5 1086 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 FAM129BQ96TA1 746 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 LIN7BQ9HAP6 207 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 BRPF3Q9ULD4 1205 aa7.6□□□□□ -1.19
GPCPD1-204ENST00000473797 FAM95CA0A1B0GW59 222 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms