RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	IL1R1	P14778	569 aa		11.23	□□□□□ -0.61
CHEK2-223	ENST00000472807	NF2	P35240	595 aa		11.23	□□□□□ -0.61
CHEK2-223	ENST00000472807	ALDH1L2	Q3SY69	923 aa		11.23	□□□□□ -0.61
CHEK2-223	ENST00000472807	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.23	□□□□□ -0.61
CHEK2-223	ENST00000472807	SMC4	Q9NTJ3	1288 aa		11.23	□□□□□ -0.61
CHEK2-223	ENST00000472807	TSKS	Q9UJT2	592 aa		11.23	□□□□□ -0.61
CHEK2-223	ENST00000472807	FAM155A	B1AL88	458 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	COL1A1	P02452	1464 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	SLC10A3	P09131	477 aa		11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	CT47B1	P0C2W7	299 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	RABL6	Q3YEC7	729 aa	Predicted RBP	11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	MROH5	Q6ZUA9	1318 aa		11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	CDCA7L	Q96GN5	454 aa		11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	KAZALD1	Q96I82	304 aa		11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	SCAF8	Q9UPN6	1271 aa	Known RBP	11.22	□□□□□ -0.61
CHEK2-223	ENST00000472807	FKBP1A	P62942	108 aa	Known RBP	11.21	□□□□□ -0.61
CHEK2-223	ENST00000472807	UBE4A	Q14139	1066 aa		11.21	□□□□□ -0.61
CHEK2-223	ENST00000472807	TTLL12	Q14166	644 aa	Predicted RBP	11.21	□□□□□ -0.61
CHEK2-223	ENST00000472807	DLGAP5	Q15398	846 aa		11.21	□□□□□ -0.61
CHEK2-223	ENST00000472807	CERS5	Q8N5B7	392 aa		11.21	□□□□□ -0.61
CHEK2-223	ENST00000472807	ANKRD44	Q8N8A2	993 aa		11.21	□□□□□ -0.61
CHEK2-223	ENST00000472807	ZIC5	Q96T25	663 aa		11.21	□□□□□ -0.61
CHEK2-223	ENST00000472807	ECM29	Q5VYK3	1845 aa		11.21	□□□□□ -0.62
CHEK2-223	ENST00000472807	AKAP11	Q9UKA4	1901 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807		F8W031	263 aa	Predicted RBP	11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	MYO1B	O43795	1136 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	KIF23	Q02241	960 aa	Predicted RBP	11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	METTL24	Q5JXM2	366 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	PRAMEF18	Q5VWM3	479 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	VPS37D	Q86XT2	251 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	RASAL3	Q86YV0	1011 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	PUS3	Q9BZE2	481 aa	Known RBP	11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	SAGE1	Q9NXZ1	904 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	JAG2	Q9Y219	1238 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	ARAP2	Q8WZ64	1704 aa		11.2	□□□□□ -0.62
CHEK2-223	ENST00000472807	HIBADH	P31937	336 aa	Known RBP	11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	GYG1	P46976	350 aa		11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	REM2	Q8IYK8	340 aa	Predicted RBP	11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	MTMR14	Q8NCE2	650 aa		11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	ZBED3	Q96IU2	234 aa	Predicted RBP	11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	USP44	Q9H0E7	712 aa		11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	RIPOR2	Q9Y4F9	1068 aa		11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	CASP8AP2	Q9UKL3	1982 aa		11.19	□□□□□ -0.62
CHEK2-223	ENST00000472807	FAM205A	Q6ZU69	1335 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	SPDYE2B	A6NHP3	402 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	UBE2Q2L	H0YL09	131 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	SPDYE6	P0CI01	402 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	RBM5	P52756	815 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	CFAP100	Q494V2	611 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	CAVIN4	Q5BKX8	364 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	MFSD14B	Q5SR56	506 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	MOB2	Q70IA6	237 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	ARMC9	Q7Z3E5	817 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	TRMT2A	Q8IZ69	625 aa	Known RBP	11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	TDRD7	Q8NHU6	1098 aa	Known RBP	11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	ABHD8	Q96I13	439 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	PPP2R3B	Q9Y5P8	575 aa		11.18	□□□□□ -0.62
CHEK2-223	ENST00000472807	FRAT2	O75474	233 aa	Predicted RBP	11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	PDE8B	O95263	885 aa		11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	UBTFL1	P0CB47	393 aa	Predicted RBP	11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	PUM3	Q15397	648 aa	Known RBP	11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	LRRC24	Q50LG9	513 aa		11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	FAM84B	Q96KN1	310 aa	Predicted RBP	11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	CSRNP1	Q96S65	589 aa		11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	API5	Q9BZZ5	524 aa	Known RBP	11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	DEFB129	Q9H1M3	183 aa		11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	VEZT	Q9HBM0	779 aa		11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	SERPINA10	Q9UK55	444 aa		11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	NOB1	Q9ULX3	412 aa	Known RBP	11.17	□□□□□ -0.62
CHEK2-223	ENST00000472807	KIF16B	Q96L93	1317 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	CLRN2	A0PK11	232 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	TRPA1	O75762	1119 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	IFIT1	P09914	478 aa	Known RBP	11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	PRKG1	Q13976	671 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	VGLL2	Q8N8G2	317 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	KLHDC4	Q8TBB5	520 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	RNF186	Q9NXI6	227 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	TTF2	Q9UNY4	1162 aa	Known RBP	11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	HDAC5	Q9UQL6	1122 aa		11.16	□□□□□ -0.62
CHEK2-223	ENST00000472807	CHAF1A	Q13111	956 aa	Predicted RBP	11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	TNFAIP1	Q13829	316 aa		11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	SUPT20HL1	Q3ZLR7	823 aa		11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	FBXO33	Q7Z6M2	555 aa		11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	TBC1D22A	Q8WUA7	517 aa		11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	PRMT6	Q96LA8	375 aa	Predicted RBP	11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	ANGEL1	Q9UNK9	670 aa	Known RBP	11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	PCDHAC2	Q9Y5I4	1007 aa		11.15	□□□□□ -0.62
CHEK2-223	ENST00000472807	MYH13	Q9UKX3	1938 aa		11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	EYA2	O00167	538 aa		11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	PPP1R12B	O60237	982 aa	Predicted RBP	11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	MYCN	P04198	464 aa	Predicted RBP	11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	SLC5A1	P13866	664 aa		11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	RARS	P54136	660 aa	Known RBP	11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	PTPN12	Q05209	780 aa	Known RBP	11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	SREBF2	Q12772	1141 aa		11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	DGKZ	Q13574	1117 aa		11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	MCOLN1	Q9GZU1	580 aa		11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	SSC5D	A1L4H1	1573 aa		11.14	□□□□□ -0.63
CHEK2-223	ENST00000472807	CRK	P46108	304 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms