RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ARID3AQ99856 593 aa9.4□□□□□ -0.9
CD46-213ENST00000471987 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
CD46-213ENST00000471987 STOML1Q9UBI4 398 aa9.4□□□□□ -0.9
CD46-213ENST00000471987 BRPF3Q9ULD4 1205 aa9.4□□□□□ -0.9
CD46-213ENST00000471987 SERPINB4P48594 390 aa9.39□□□□□ -0.91
CD46-213ENST00000471987 PEAR1Q5VY43 1037 aaPredicted RBP9.39□□□□□ -0.91
CD46-213ENST00000471987 ANKRD34AQ69YU3 496 aa9.39□□□□□ -0.91
CD46-213ENST00000471987 NBPF11Q86T75 865 aa9.39□□□□□ -0.91
CD46-213ENST00000471987 ARMC10Q8N2F6 343 aa9.39□□□□□ -0.91
CD46-213ENST00000471987 ASAP3Q8TDY4 903 aa9.39□□□□□ -0.91
CD46-213ENST00000471987 FAM46AQ96IP4 442 aaKnown RBP9.39□□□□□ -0.91
CD46-213ENST00000471987 RNF208Q9H0X6 261 aa9.39□□□□□ -0.91
CD46-213ENST00000471987 PDE4CQ08493 712 aa9.38□□□□□ -0.91
CD46-213ENST00000471987 VN1R5Q7Z5H4 357 aa9.38□□□□□ -0.91
CD46-213ENST00000471987 LATS2Q9NRM7 1088 aa9.38□□□□□ -0.91
CD46-213ENST00000471987 SOX1O00570 391 aaPredicted RBP9.37□□□□□ -0.91
CD46-213ENST00000471987 SART1O43290 800 aaKnown RBP9.37□□□□□ -0.91
CD46-213ENST00000471987 HYAL3O43820 417 aaPredicted RBP9.37□□□□□ -0.91
CD46-213ENST00000471987 NEFLP07196 543 aa9.37□□□□□ -0.91
CD46-213ENST00000471987 MYRFLQ96LU7 910 aa9.37□□□□□ -0.91
CD46-213ENST00000471987 RUSC1Q9BVN2 902 aa9.37□□□□□ -0.91
CD46-213ENST00000471987 NDUFB5O43674 189 aa9.36□□□□□ -0.91
CD46-213ENST00000471987 SOX17Q9H6I2 414 aaPredicted RBP9.36□□□□□ -0.91
CD46-213ENST00000471987 SUPT5HO00267 1087 aaKnown RBP9.35□□□□□ -0.91
CD46-213ENST00000471987 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
CD46-213ENST00000471987 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
CD46-213ENST00000471987 POLR3DP05423 398 aaPredicted RBP9.35□□□□□ -0.91
CD46-213ENST00000471987 ECM1Q16610 540 aa9.35□□□□□ -0.91
CD46-213ENST00000471987 HGSNATQ68CP4 663 aa9.35□□□□□ -0.91
CD46-213ENST00000471987 FDX2Q6P4F2 183 aa9.35□□□□□ -0.91
CD46-213ENST00000471987 MEGF11A6BM72 1044 aa9.34□□□□□ -0.91
CD46-213ENST00000471987 ARHGAP4P98171 946 aa9.34□□□□□ -0.91
CD46-213ENST00000471987 PDE3BQ13370 1112 aa9.34□□□□□ -0.91
CD46-213ENST00000471987 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.34□□□□□ -0.91
CD46-213ENST00000471987 GALNT12Q8IXK2 581 aa9.34□□□□□ -0.91
CD46-213ENST00000471987 RETREG2Q8NC44 543 aa9.34□□□□□ -0.91
CD46-213ENST00000471987 ESRRAP11474 423 aaPredicted RBP9.33□□□□□ -0.92
CD46-213ENST00000471987 PREPP48147 710 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 TXNDC2Q86VQ3 553 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 FAM20CQ8IXL6 584 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 CITED4Q96RK1 184 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 KRTAP4-12Q9BQ66 201 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 USP26Q9BXU7 913 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 C7orf69Q9H7B7 122 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 HIF3AQ9Y2N7 669 aa9.33□□□□□ -0.92
CD46-213ENST00000471987 A0A1W2PP55 124 aa9.32□□□□□ -0.92
CD46-213ENST00000471987 NUTM2GQ5VZR2 741 aa9.32□□□□□ -0.92
CD46-213ENST00000471987 CLEC10AQ8IUN9 316 aa9.32□□□□□ -0.92
CD46-213ENST00000471987 CCNJLQ8IV13 435 aa9.32□□□□□ -0.92
CD46-213ENST00000471987 METTL12A8MUP2 240 aa9.31□□□□□ -0.92
CD46-213ENST00000471987 BMP3P12645 472 aa9.31□□□□□ -0.92
CD46-213ENST00000471987 NFIAQ12857 509 aa9.31□□□□□ -0.92
CD46-213ENST00000471987 RNF43Q68DV7 783 aa9.31□□□□□ -0.92
CD46-213ENST00000471987 TRIM42Q8IWZ5 723 aa9.31□□□□□ -0.92
CD46-213ENST00000471987 CCER1Q8TC90 406 aaPredicted RBP9.31□□□□□ -0.92
CD46-213ENST00000471987 FAM129BQ96TA1 746 aa9.31□□□□□ -0.92
CD46-213ENST00000471987 LIN7BQ9HAP6 207 aa9.31□□□□□ -0.92
CD46-213ENST00000471987 A0A096LPE4 126 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 LOC100289279A0A1B0GTE1 492 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 A0A1W2PPZ6 126 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 HMX2A2RU54 273 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
CD46-213ENST00000471987 GSTM4Q03013 218 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 FAM83CQ9BQN1 747 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 TMPRSS13Q9BYE2 586 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 KRTAP9-9Q9BYP9 154 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 KRTAP9-4Q9BYQ2 154 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 CLEC4MQ9H2X3 399 aaPredicted RBP9.3□□□□□ -0.92
CD46-213ENST00000471987 KCNF1Q9H3M0 494 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 SUGCTQ9HAC7 445 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 CYP4F12Q9HCS2 524 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
CD46-213ENST00000471987 CPNE3O75131 537 aaKnown RBP9.29□□□□□ -0.92
CD46-213ENST00000471987 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
CD46-213ENST00000471987 C12orf50Q8NA57 414 aaPredicted RBP9.29□□□□□ -0.92
CD46-213ENST00000471987 SMG8Q8ND04 991 aaKnown RBP9.29□□□□□ -0.92
CD46-213ENST00000471987 TCF12Q99081 682 aa9.29□□□□□ -0.92
CD46-213ENST00000471987 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
CD46-213ENST00000471987 GRIA4P48058 902 aa9.28□□□□□ -0.92
CD46-213ENST00000471987 PCDH1Q08174 1060 aa9.28□□□□□ -0.92
CD46-213ENST00000471987 EXOSC6Q5RKV6 272 aaKnown RBP9.28□□□□□ -0.92
CD46-213ENST00000471987 KIAA0319Q5VV43 1072 aa9.28□□□□□ -0.92
CD46-213ENST00000471987 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
CD46-213ENST00000471987 SSTR4P31391 388 aa9.27□□□□□ -0.93
CD46-213ENST00000471987 CD97P48960 835 aa9.27□□□□□ -0.93
CD46-213ENST00000471987 ORC1Q13415 861 aa9.27□□□□□ -0.93
CD46-213ENST00000471987 ZDHHC13Q8IUH4 622 aa9.27□□□□□ -0.93
CD46-213ENST00000471987 TMC1Q8TDI8 760 aa9.27□□□□□ -0.93
CD46-213ENST00000471987 COBLO75128 1261 aa9.26□□□□□ -0.93
CD46-213ENST00000471987 TIAF1O95411 115 aa9.26□□□□□ -0.93
CD46-213ENST00000471987 TGFB1P01137 390 aa9.26□□□□□ -0.93
CD46-213ENST00000471987 SPRED3Q2MJR0 410 aa9.26□□□□□ -0.93
CD46-213ENST00000471987 DNAJC25Q9H1X3 360 aa9.26□□□□□ -0.93
CD46-213ENST00000471987 EHD4Q9H223 541 aa9.26□□□□□ -0.93
CD46-213ENST00000471987 KRTAP4-8A0A0G2JLE6 195 aa9.25□□□□□ -0.93
CD46-213ENST00000471987 DLGAP3O95886 979 aa9.25□□□□□ -0.93
CD46-213ENST00000471987 MAP4P27816 1152 aaKnown RBP9.25□□□□□ -0.93
CD46-213ENST00000471987 ZNF423Q2M1K9 1284 aa9.25□□□□□ -0.93
CD46-213ENST00000471987 DDX54Q8TDD1 881 aaKnown RBP9.25□□□□□ -0.93
CD46-213ENST00000471987 NRSN2Q9GZP1 204 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms