RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 PRMT6Q96LA8 375 aaPredicted RBP16.77■□□□□ 0.28
CPSF4-210ENST00000469897 DEFB129Q9H1M3 183 aa16.77■□□□□ 0.28
CPSF4-210ENST00000469897 FZD1Q9UP38 647 aa16.77■□□□□ 0.28
CPSF4-210ENST00000469897 GYG1P46976 350 aa16.76■□□□□ 0.27
CPSF4-210ENST00000469897 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
CPSF4-210ENST00000469897 MKRN3Q13064 507 aaKnown RBP16.76■□□□□ 0.27
CPSF4-210ENST00000469897 CFAP100Q494V2 611 aa16.76■□□□□ 0.27
CPSF4-210ENST00000469897 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
CPSF4-210ENST00000469897 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
CPSF4-210ENST00000469897 BICC1Q9H694 974 aaKnown RBP16.76■□□□□ 0.27
CPSF4-210ENST00000469897 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.76■□□□□ 0.27
CPSF4-210ENST00000469897 RIPOR2Q9Y4F9 1068 aa16.76■□□□□ 0.27
CPSF4-210ENST00000469897 UTYO14607 1347 aa16.75■□□□□ 0.27
CPSF4-210ENST00000469897 E9PSI1 815 aa16.75■□□□□ 0.27
CPSF4-210ENST00000469897 TBC1D8O95759 1140 aa16.75■□□□□ 0.27
CPSF4-210ENST00000469897 HIBADHP31937 336 aaKnown RBP16.75■□□□□ 0.27
CPSF4-210ENST00000469897 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
CPSF4-210ENST00000469897 UBE4AQ14139 1066 aa16.75■□□□□ 0.27
CPSF4-210ENST00000469897 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
CPSF4-210ENST00000469897 FAM84BQ96KN1 310 aaPredicted RBP16.75■□□□□ 0.27
CPSF4-210ENST00000469897 ANGEL1Q9UNK9 670 aaKnown RBP16.75■□□□□ 0.27
CPSF4-210ENST00000469897 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
CPSF4-210ENST00000469897 FKBP1AP62942 108 aaKnown RBP16.74■□□□□ 0.27
CPSF4-210ENST00000469897 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
CPSF4-210ENST00000469897 LRRC24Q50LG9 513 aa16.74■□□□□ 0.27
CPSF4-210ENST00000469897 LDLRAD1Q5T700 205 aa16.74■□□□□ 0.27
CPSF4-210ENST00000469897 TDRD7Q8NHU6 1098 aaKnown RBP16.74■□□□□ 0.27
CPSF4-210ENST00000469897 CDCA7LQ96GN5 454 aa16.74■□□□□ 0.27
CPSF4-210ENST00000469897 SPDYE2BA6NHP3 402 aa16.73■□□□□ 0.27
CPSF4-210ENST00000469897 MYO1BO43795 1136 aa16.73■□□□□ 0.27
CPSF4-210ENST00000469897 SPDYE6P0CI01 402 aa16.73■□□□□ 0.27
CPSF4-210ENST00000469897 TM4SF4P48230 202 aa16.73■□□□□ 0.27
CPSF4-210ENST00000469897 AOX1Q06278 1338 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 FAM205AQ6ZU69 1335 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 RGS19P49795 217 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
CPSF4-210ENST00000469897 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 KLHDC4Q8TBB5 520 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 SLC10A4Q96EP9 437 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 VEZTQ9HBM0 779 aa16.72■□□□□ 0.27
CPSF4-210ENST00000469897 PTPRCP08575 1304 aa16.71■□□□□ 0.27
CPSF4-210ENST00000469897 MROH5Q6ZUA9 1318 aa16.71■□□□□ 0.27
CPSF4-210ENST00000469897 MFSD14BQ5SR56 506 aa16.71■□□□□ 0.27
CPSF4-210ENST00000469897 NBPF12Q5TAG4 269 aaPredicted RBP16.71■□□□□ 0.27
CPSF4-210ENST00000469897 TTF2Q9UNY4 1162 aaKnown RBP16.71■□□□□ 0.27
CPSF4-210ENST00000469897 IQSEC3Q9UPP2 1182 aaPredicted RBP16.71■□□□□ 0.27
CPSF4-210ENST00000469897 MLLT1Q03111 559 aaPredicted RBP16.7■□□□□ 0.26
CPSF4-210ENST00000469897 RASA3Q14644 834 aa16.7■□□□□ 0.26
CPSF4-210ENST00000469897 SUPT20HL1Q3ZLR7 823 aa16.7■□□□□ 0.26
CPSF4-210ENST00000469897 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
CPSF4-210ENST00000469897 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
CPSF4-210ENST00000469897 FBXO33Q7Z6M2 555 aa16.7■□□□□ 0.26
CPSF4-210ENST00000469897 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
CPSF4-210ENST00000469897 TDRD3Q9H7E2 651 aaKnown RBP16.7■□□□□ 0.26
CPSF4-210ENST00000469897 POLR2AP24928 1970 aaKnown RBP16.69■□□□□ 0.26
CPSF4-210ENST00000469897 PPP1R12BO60237 982 aaPredicted RBP16.69■□□□□ 0.26
CPSF4-210ENST00000469897 PDE8BO95263 885 aa16.69■□□□□ 0.26
CPSF4-210ENST00000469897 GRIK5Q16478 980 aa16.69■□□□□ 0.26
CPSF4-210ENST00000469897 CTU1Q7Z7A3 348 aaKnown RBP16.69■□□□□ 0.26
CPSF4-210ENST00000469897 ZNF296Q8WUU4 475 aaPredicted RBP16.69■□□□□ 0.26
CPSF4-210ENST00000469897 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
CPSF4-210ENST00000469897 PPP2R3BQ9Y5P8 575 aa16.69■□□□□ 0.26
CPSF4-210ENST00000469897 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-210ENST00000469897 USP2O75604 605 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-210ENST00000469897 BCAMP50895 628 aa16.68■□□□□ 0.26
CPSF4-210ENST00000469897 SREBF2Q12772 1141 aa16.68■□□□□ 0.26
CPSF4-210ENST00000469897 CHAF1AQ13111 956 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-210ENST00000469897 MAP3K11Q16584 847 aa16.68■□□□□ 0.26
CPSF4-210ENST00000469897 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
CPSF4-210ENST00000469897 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
CPSF4-210ENST00000469897 R3HDMLQ9H3Y0 253 aa16.68■□□□□ 0.26
CPSF4-210ENST00000469897 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
CPSF4-210ENST00000469897 SERPINA10Q9UK55 444 aa16.68■□□□□ 0.26
CPSF4-210ENST00000469897 PAPPA2Q9BXP8 1791 aa16.67■□□□□ 0.26
CPSF4-210ENST00000469897 GPR25O00155 361 aa16.67■□□□□ 0.26
CPSF4-210ENST00000469897 DZIP1LQ8IYY4 767 aaKnown RBP16.67■□□□□ 0.26
CPSF4-210ENST00000469897 TRMT2AQ8IZ69 625 aaKnown RBP16.67■□□□□ 0.26
CPSF4-210ENST00000469897 VGLL2Q8N8G2 317 aa16.67■□□□□ 0.26
CPSF4-210ENST00000469897 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
CPSF4-210ENST00000469897 SPEF2Q9C093 1822 aa16.67■□□□□ 0.26
CPSF4-210ENST00000469897 CRKP46108 304 aa16.66■□□□□ 0.26
CPSF4-210ENST00000469897 NOB1Q9ULX3 412 aaKnown RBP16.66■□□□□ 0.26
CPSF4-210ENST00000469897 MYH3P11055 1940 aa16.66■□□□□ 0.26
CPSF4-210ENST00000469897 TCP10L2B9ZVM9 353 aa16.65■□□□□ 0.26
CPSF4-210ENST00000469897 INHBEP58166 350 aa16.65■□□□□ 0.26
CPSF4-210ENST00000469897 SPDYE2Q495Y8 402 aa16.65■□□□□ 0.26
CPSF4-210ENST00000469897 PSME4Q14997 1843 aa16.65■□□□□ 0.26
CPSF4-210ENST00000469897 MANSC4A6NHS7 340 aaPredicted RBP16.64■□□□□ 0.25
CPSF4-210ENST00000469897 IREB2P48200 963 aaKnown RBP16.64■□□□□ 0.25
CPSF4-210ENST00000469897 RFX5P48382 616 aaPredicted RBP16.64■□□□□ 0.25
CPSF4-210ENST00000469897 WNK4Q96J92 1243 aa16.64■□□□□ 0.25
CPSF4-210ENST00000469897 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
CPSF4-210ENST00000469897 UNCXA6NJT0 531 aa16.63■□□□□ 0.25
CPSF4-210ENST00000469897 EYA2O00167 538 aa16.63■□□□□ 0.25
CPSF4-210ENST00000469897 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
CPSF4-210ENST00000469897 FGFR2P21802 821 aa16.63■□□□□ 0.25
CPSF4-210ENST00000469897 SOX10P56693 466 aa16.63■□□□□ 0.25
CPSF4-210ENST00000469897 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
CPSF4-210ENST00000469897 IFNL1Q8IU54 200 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms