RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CAVIN4Q5BKX8 364 aa28.01■■■□□ 2.07
TRAF4-207ENST00000461195 FBXO33Q7Z6M2 555 aa28.01■■■□□ 2.07
TRAF4-207ENST00000461195 ABT1Q9ULW3 272 aaKnown RBP28.01■■■□□ 2.07
TRAF4-207ENST00000461195 ASTN2O75129 1339 aaPredicted RBP28■■■□□ 2.07
TRAF4-207ENST00000461195 FAM205AQ6ZU69 1335 aa28■■■□□ 2.07
TRAF4-207ENST00000461195 IFIT1P09914 478 aaKnown RBP28■■■□□ 2.07
TRAF4-207ENST00000461195 FGFR2P21802 821 aa28■■■□□ 2.07
TRAF4-207ENST00000461195 CERS5Q8N5B7 392 aa28■■■□□ 2.07
TRAF4-207ENST00000461195 PA2G4Q9UQ80 394 aaKnown RBP28■■■□□ 2.07
TRAF4-207ENST00000461195 FOXN1O15353 648 aa27.99■■■□□ 2.07
TRAF4-207ENST00000461195 CELF2O95319 508 aaKnown RBP27.99■■■□□ 2.07
TRAF4-207ENST00000461195 RLBP1P12271 317 aa27.99■■■□□ 2.07
TRAF4-207ENST00000461195 IL15P40933 162 aaPredicted RBP27.99■■■□□ 2.07
TRAF4-207ENST00000461195 SULF1Q8IWU6 871 aa27.99■■■□□ 2.07
TRAF4-207ENST00000461195 CEP126Q9P2H0 1117 aa27.99■■■□□ 2.07
TRAF4-207ENST00000461195 JAG2Q9Y219 1238 aa27.99■■■□□ 2.07
TRAF4-207ENST00000461195 SLC5A1P13866 664 aa27.98■■■□□ 2.07
TRAF4-207ENST00000461195 VEGFBP49765 207 aa27.98■■■□□ 2.07
TRAF4-207ENST00000461195 ANGEL2Q5VTE6 544 aaKnown RBP27.98■■■□□ 2.07
TRAF4-207ENST00000461195 ITPRIPQ8IWB1 547 aa27.98■■■□□ 2.07
TRAF4-207ENST00000461195 LPIN2Q92539 896 aa27.98■■■□□ 2.07
TRAF4-207ENST00000461195 ZNF408Q9H9D4 720 aa27.98■■■□□ 2.07
TRAF4-207ENST00000461195 RASSF10A6NK89 507 aa27.97■■■□□ 2.07
TRAF4-207ENST00000461195 ADM5C9JUS6 153 aa27.97■■■□□ 2.07
TRAF4-207ENST00000461195 DEFB115Q30KQ5 88 aa27.97■■■□□ 2.07
TRAF4-207ENST00000461195 PITPNM2Q9BZ72 1349 aa27.96■■■□□ 2.07
TRAF4-207ENST00000461195 NBPF9Q3BBW0 867 aa27.96■■■□□ 2.07
TRAF4-207ENST00000461195 WNT10BO00744 389 aa27.95■■■□□ 2.06
TRAF4-207ENST00000461195 BCAMP50895 628 aa27.95■■■□□ 2.06
TRAF4-207ENST00000461195 RCAN3Q9UKA8 241 aa27.95■■■□□ 2.06
TRAF4-207ENST00000461195 F8W031 263 aaPredicted RBP27.94■■■□□ 2.06
TRAF4-207ENST00000461195 FRAT2O75474 233 aaPredicted RBP27.94■■■□□ 2.06
TRAF4-207ENST00000461195 MS4A1P11836 297 aa27.94■■■□□ 2.06
TRAF4-207ENST00000461195 ATP2B3Q16720 1220 aa27.94■■■□□ 2.06
TRAF4-207ENST00000461195 MFSD14BQ5SR56 506 aa27.94■■■□□ 2.06
TRAF4-207ENST00000461195 DLK2Q6UY11 383 aa27.94■■■□□ 2.06
TRAF4-207ENST00000461195 IQSEC3Q9UPP2 1182 aaPredicted RBP27.94■■■□□ 2.06
TRAF4-207ENST00000461195 TLL2Q9Y6L7 1015 aa27.94■■■□□ 2.06
TRAF4-207ENST00000461195 ARAP2Q8WZ64 1704 aa27.94■■■□□ 2.06
TRAF4-207ENST00000461195 ZBTB7BO15156 539 aaPredicted RBP27.93■■■□□ 2.06
TRAF4-207ENST00000461195 AIDAQ96BJ3 306 aa27.93■■■□□ 2.06
TRAF4-207ENST00000461195 PNMA6EA0A0J9YXQ4 647 aa27.92■■■□□ 2.06
TRAF4-207ENST00000461195 DLGAP5Q15398 846 aa27.92■■■□□ 2.06
TRAF4-207ENST00000461195 PANK1Q8TE04 598 aa27.92■■■□□ 2.06
TRAF4-207ENST00000461195 ZBED3Q96IU2 234 aaPredicted RBP27.92■■■□□ 2.06
TRAF4-207ENST00000461195 MYH13Q9UKX3 1938 aa27.91■■■□□ 2.06
TRAF4-207ENST00000461195 CHAF1AQ13111 956 aaPredicted RBP27.91■■■□□ 2.06
TRAF4-207ENST00000461195 SAPCD2Q86UD0 394 aa27.91■■■□□ 2.06
TRAF4-207ENST00000461195 MTMR14Q8NCE2 650 aa27.91■■■□□ 2.06
TRAF4-207ENST00000461195 CTCFP49711 727 aaPredicted RBP27.9■■■□□ 2.06
TRAF4-207ENST00000461195 TBC1D22AQ8WUA7 517 aa27.9■■■□□ 2.06
TRAF4-207ENST00000461195 CDCA5Q96FF9 252 aa27.9■■■□□ 2.06
TRAF4-207ENST00000461195 PRDM10Q9NQV6 1147 aa27.9■■■□□ 2.06
TRAF4-207ENST00000461195 CFAP100Q494V2 611 aa27.89■■■□□ 2.06
TRAF4-207ENST00000461195 C1orf115Q9H7X2 142 aa27.89■■■□□ 2.06
TRAF4-207ENST00000461195 ECM29Q5VYK3 1845 aa27.89■■■□□ 2.06
TRAF4-207ENST00000461195 ATP8B2P98198 1209 aa27.88■■■□□ 2.05
TRAF4-207ENST00000461195 PAXIP1Q6ZW49 1069 aaPredicted RBP27.88■■■□□ 2.05
TRAF4-207ENST00000461195 WBP1LQ9NX94 342 aa27.88■■■□□ 2.05
TRAF4-207ENST00000461195 TTF2Q9UNY4 1162 aaKnown RBP27.88■■■□□ 2.05
TRAF4-207ENST00000461195 ECE1P42892 770 aa27.87■■■□□ 2.05
TRAF4-207ENST00000461195 C2orf69Q8N8R5 385 aa27.87■■■□□ 2.05
TRAF4-207ENST00000461195 HHIPL1Q96JK4 782 aa27.87■■■□□ 2.05
TRAF4-207ENST00000461195 GBA2Q9HCG7 927 aaPredicted RBP27.87■■■□□ 2.05
TRAF4-207ENST00000461195 SCAF8Q9UPN6 1271 aaKnown RBP27.87■■■□□ 2.05
TRAF4-207ENST00000461195 AKAP2Q9Y2D5 859 aa27.87■■■□□ 2.05
TRAF4-207ENST00000461195 WDR33Q9C0J8 1336 aaKnown RBP27.87■■■□□ 2.05
TRAF4-207ENST00000461195 TFCP2Q12800 502 aa27.86■■■□□ 2.05
TRAF4-207ENST00000461195 G3BP1Q13283 466 aaKnown RBP eCLIP27.86■■■□□ 2.05
TRAF4-207ENST00000461195 POLA2Q14181 598 aa27.86■■■□□ 2.05
TRAF4-207ENST00000461195 APOBEC3FQ8IUX4 373 aaKnown RBP27.86■■■□□ 2.05
TRAF4-207ENST00000461195 GNL3LQ9NVN8 582 aaKnown RBP27.86■■■□□ 2.05
TRAF4-207ENST00000461195 SPDYE2BA6NHP3 402 aa27.85■■■□□ 2.05
TRAF4-207ENST00000461195 MYO1BO43795 1136 aa27.85■■■□□ 2.05
TRAF4-207ENST00000461195 SPDYE6P0CI01 402 aa27.85■■■□□ 2.05
TRAF4-207ENST00000461195 RBM5P52756 815 aaKnown RBP eCLIP27.85■■■□□ 2.058e-14■■■■□ 26.3
TRAF4-207ENST00000461195 SSH3Q8TE77 659 aa27.85■■■□□ 2.05
TRAF4-207ENST00000461195 CAPNS2Q96L46 248 aa27.85■■■□□ 2.05
TRAF4-207ENST00000461195 SERPINA10Q9UK55 444 aa27.85■■■□□ 2.05
TRAF4-207ENST00000461195 PCDHAC2Q9Y5I4 1007 aa27.85■■■□□ 2.05
TRAF4-207ENST00000461195 LBX1P52954 281 aa27.84■■■□□ 2.05
TRAF4-207ENST00000461195 CYP4F22Q6NT55 531 aa27.84■■■□□ 2.05
TRAF4-207ENST00000461195 PRMT6Q96LA8 375 aaPredicted RBP27.84■■■□□ 2.05
TRAF4-207ENST00000461195 HUNKP57058 714 aa27.83■■■□□ 2.05
TRAF4-207ENST00000461195 TIMM10P62072 90 aa27.83■■■□□ 2.05
TRAF4-207ENST00000461195 MVPQ14764 893 aaKnown RBP27.83■■■□□ 2.05
TRAF4-207ENST00000461195 WDR66Q8TBY9 1149 aa27.83■■■□□ 2.05
TRAF4-207ENST00000461195 A0A1B0GUL7 405 aa27.82■■■□□ 2.04
TRAF4-207ENST00000461195 ADORA1P30542 326 aa27.82■■■□□ 2.04
TRAF4-207ENST00000461195 GRM1Q13255 1194 aa27.82■■■□□ 2.04
TRAF4-207ENST00000461195 GRIK5Q16478 980 aa27.82■■■□□ 2.04
TRAF4-207ENST00000461195 SUGT1Q9Y2Z0 365 aa27.82■■■□□ 2.04
TRAF4-207ENST00000461195 SEMA3EO15041 775 aa27.81■■■□□ 2.04
TRAF4-207ENST00000461195 PHKA1P46020 1223 aa27.81■■■□□ 2.04
TRAF4-207ENST00000461195 CRKP46108 304 aa27.8■■■□□ 2.04
TRAF4-207ENST00000461195 HDLBPQ00341 1268 aaKnown RBP27.8■■■□□ 2.04
TRAF4-207ENST00000461195 PRAMEF18Q5VWM3 479 aa27.8■■■□□ 2.04
TRAF4-207ENST00000461195 CCDC102BQ68D86 513 aa27.8■■■□□ 2.04
TRAF4-207ENST00000461195 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.8■■■□□ 2.04
TRAF4-207ENST00000461195 XAGE2Q96GT9 111 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms