RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 PFKFB2O60825 505 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 PDE8BO95263 885 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 SLC9C2Q5TAH2 1124 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 NSUN7Q8NE18 718 aaKnown RBP14.22□□□□□ -0.13
COL27A1-202ENST00000451716 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
COL27A1-202ENST00000451716 PIH1D3Q9NQM4 214 aaKnown RBP14.22□□□□□ -0.13
COL27A1-202ENST00000451716 SPATA31A1Q5TZJ5 1347 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 EIF5P55010 431 aaKnown RBP14.21□□□□□ -0.13
COL27A1-202ENST00000451716 GUCY1B3Q02153 619 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 APPBP2Q92624 585 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 PTPDC1A2A3K4 754 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 ERVV-1B6SEH8 477 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 KCNQ2O43526 872 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 KCNQ4P56696 695 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 ITPK1Q13572 414 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 CCDC102BQ68D86 513 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 DENND2AQ9ULE3 1009 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 NUP98P52948 1817 aa14.21□□□□□ -0.13
COL27A1-202ENST00000451716 LOC102724428A0A0B4J2F2 783 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 ZBTB22O15209 634 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 PDIA3P30101 505 aaKnown RBP14.2□□□□□ -0.14
COL27A1-202ENST00000451716 SIK1P57059 783 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 ZSCAN30Q86W11 494 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 SLIT2O94813 1529 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 ZFYP08048 801 aaPredicted RBP14.2□□□□□ -0.14
COL27A1-202ENST00000451716 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 IMMTQ16891 758 aaKnown RBP14.2□□□□□ -0.14
COL27A1-202ENST00000451716 LRRFIP1Q32MZ4 808 aaKnown RBP14.2□□□□□ -0.14
COL27A1-202ENST00000451716 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
COL27A1-202ENST00000451716 FTOQ9C0B1 505 aaKnown RBP eCLIP14.2□□□□□ -0.141e-6■■□□□ 13.7
COL27A1-202ENST00000451716 USP25Q9UHP3 1055 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 RESTQ13127 1097 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 SMARCC2Q8TAQ2 1214 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
COL27A1-202ENST00000451716 DOT1LQ8TEK3 1739 aa14.19□□□□□ -0.14
COL27A1-202ENST00000451716 GOLGA6L4A6NEF3 574 aa14.19□□□□□ -0.14
COL27A1-202ENST00000451716 SMIM5Q71RC9 77 aa14.19□□□□□ -0.14
COL27A1-202ENST00000451716 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
COL27A1-202ENST00000451716 WWC3Q9ULE0 1092 aa14.19□□□□□ -0.14
COL27A1-202ENST00000451716 APPP05067 770 aa14.19□□□□□ -0.14
COL27A1-202ENST00000451716 CTNNA3Q9UI47 895 aa14.19□□□□□ -0.14
COL27A1-202ENST00000451716 ADD2P35612 726 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 PLCB2Q00722 1185 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 CERS3Q8IU89 383 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
COL27A1-202ENST00000451716 DACT1Q9NYF0 836 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 TAOK2Q9UL54 1235 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 PRC1O43663 620 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 ZSCAN20P17040 1043 aaPredicted RBP14.18□□□□□ -0.14
COL27A1-202ENST00000451716 MSNP26038 577 aaKnown RBP14.18□□□□□ -0.14
COL27A1-202ENST00000451716 CKAP2LQ8IYA6 745 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 PGBD1Q96JS3 809 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL27A1-202ENST00000451716 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.18□□□□□ -0.14
COL27A1-202ENST00000451716 NIP7Q9Y221 180 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL27A1-202ENST00000451716 ZNF532Q9HCE3 1301 aa14.18□□□□□ -0.14
COL27A1-202ENST00000451716 ZNF213O14771 459 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 LETM1O95202 739 aaPredicted RBP14.17□□□□□ -0.14
COL27A1-202ENST00000451716 OTUD7BQ6GQQ9 843 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 TICAM2Q86XR7 235 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 MPHOSPH8Q99549 860 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 FUCA2Q9BTY2 467 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 UTP14AQ9BVJ6 771 aaKnown RBP14.17□□□□□ -0.14
COL27A1-202ENST00000451716 AKAP11Q9UKA4 1901 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 SPEF2Q9C093 1822 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
COL27A1-202ENST00000451716 MYH3P11055 1940 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 CAMTA2O94983 1202 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 ANTXR2P58335 489 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 PUM3Q15397 648 aaKnown RBP14.17□□□□□ -0.14
COL27A1-202ENST00000451716 ELP1O95163 1332 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 NWD2Q9ULI1 1742 aa14.17□□□□□ -0.14
COL27A1-202ENST00000451716 BICD2Q8TD16 824 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 LPIN2Q92539 896 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 LLPHQ9BRT6 129 aaKnown RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 NBPF3Q9H094 633 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 INCENPQ9NQS7 918 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 KLF18A0A0U1RQI7 1052 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 PDE6AP16499 860 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 TMED8Q6PL24 325 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 MB21D2Q8IYB1 491 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 ZNF274Q96GC6 653 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 ANKRD36CQ5JPF3 1778 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 NR1I2O75469 434 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 KIF20AO95235 890 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 PTMAP06454 111 aaKnown RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 FDPSP14324 419 aaKnown RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 FGFR2P21802 821 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 RASGRF1Q13972 1273 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 RALYLQ86SE5 291 aaKnown RBP14.16□□□□□ -0.14
COL27A1-202ENST00000451716 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 GJB4Q9NTQ9 266 aa14.16□□□□□ -0.14
COL27A1-202ENST00000451716 AHDC1Q5TGY3 1603 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 MCM5P33992 734 aa14.15□□□□□ -0.14
COL27A1-202ENST00000451716 TBC1D10CQ8IV04 446 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms