RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 PRDM6Q9NQX0 595 aa16.45■□□□□ 0.22
AC004540.1-204ENST00000449537 MED23Q9ULK4 1368 aa16.45■□□□□ 0.22
AC004540.1-204ENST00000449537 SSC5DA1L4H1 1573 aa16.45■□□□□ 0.22
AC004540.1-204ENST00000449537 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
AC004540.1-204ENST00000449537 MYO1BO43795 1136 aa16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 HOXD10P28358 340 aa16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 GRK4P32298 578 aa16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 BMP8BP34820 402 aa16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 ZBTB38Q8NAP3 1195 aaPredicted RBP16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
AC004540.1-204ENST00000449537 LAMA3Q16787 3333 aa16.43■□□□□ 0.22
AC004540.1-204ENST00000449537 RAET1EQ8TD07 263 aa16.43■□□□□ 0.22
AC004540.1-204ENST00000449537 U2AF1L4Q8WU68 220 aaKnown RBP16.43■□□□□ 0.22
AC004540.1-204ENST00000449537 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
AC004540.1-204ENST00000449537 SRRDQ9UH36 339 aa16.43■□□□□ 0.22
AC004540.1-204ENST00000449537 PDE8AO60658 829 aa16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 ECM2O94769 699 aaPredicted RBP16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 UBXN2AP68543 259 aa16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 GTF2IP78347 998 aa16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 MTMR14Q8NCE2 650 aa16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 GDF15Q99988 308 aa16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 BABAM1Q9NWV8 329 aa16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
AC004540.1-204ENST00000449537 CLRN2A0PK11 232 aa16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 LRIT3Q3SXY7 679 aa16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 CNKSR2Q8WXI2 1034 aa16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 VEZTQ9HBM0 779 aa16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 MINPP1Q9UNW1 487 aa16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 UNC80Q8N2C7 3258 aa16.41■□□□□ 0.22
AC004540.1-204ENST00000449537 SGPL1O95470 568 aa16.4■□□□□ 0.22
AC004540.1-204ENST00000449537 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
AC004540.1-204ENST00000449537 PSMC4P43686 418 aa16.4■□□□□ 0.22
AC004540.1-204ENST00000449537 RASA3Q14644 834 aa16.4■□□□□ 0.22
AC004540.1-204ENST00000449537 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.4■□□□□ 0.22
AC004540.1-204ENST00000449537 TXNRD3Q86VQ6 643 aa16.4■□□□□ 0.22
AC004540.1-204ENST00000449537 CDC5LQ99459 802 aaKnown RBP16.4■□□□□ 0.22
AC004540.1-204ENST00000449537 FMNL1O95466 1100 aaPredicted RBP16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 CETPP11597 493 aa16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 PRMT6Q96LA8 375 aaPredicted RBP16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 PCDHAC2Q9Y5I4 1007 aa16.39■□□□□ 0.21
AC004540.1-204ENST00000449537 TFRCP02786 760 aaKnown RBP16.38■□□□□ 0.21
AC004540.1-204ENST00000449537 CAPN2P17655 700 aa16.38■□□□□ 0.21
AC004540.1-204ENST00000449537 OSBPP22059 807 aa16.38■□□□□ 0.21
AC004540.1-204ENST00000449537 BCAMP50895 628 aa16.38■□□□□ 0.21
AC004540.1-204ENST00000449537 CFAP100Q494V2 611 aa16.38■□□□□ 0.21
AC004540.1-204ENST00000449537 LEMD3Q9Y2U8 911 aa16.38■□□□□ 0.21
AC004540.1-204ENST00000449537 ZSWIM8A7E2V4 1837 aa16.38■□□□□ 0.21
AC004540.1-204ENST00000449537 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 BTBD19C9JJ37 291 aa16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 CTGFP29279 349 aa16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 C17orf99Q6UX52 265 aa16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 JARID2Q92833 1246 aaPredicted RBP16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 UNC93B1Q9H1C4 597 aa16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 CSADQ9Y600 493 aa16.37■□□□□ 0.21
AC004540.1-204ENST00000449537 VGLL4Q14135 290 aa16.36■□□□□ 0.21
AC004540.1-204ENST00000449537 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
AC004540.1-204ENST00000449537 PNNQ9H307 717 aaKnown RBP16.36■□□□□ 0.21
AC004540.1-204ENST00000449537 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
AC004540.1-204ENST00000449537 MYPNQ86TC9 1320 aa16.36■□□□□ 0.21
AC004540.1-204ENST00000449537 F8W031 263 aaPredicted RBP16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 TNFAIP1Q13829 316 aa16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 TDHQ8IZJ6 230 aa16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 CPA4Q9UI42 421 aa16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 RPTORQ8N122 1335 aa16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 MAPK8IP3Q9UPT6 1336 aa16.35■□□□□ 0.21
AC004540.1-204ENST00000449537 COL9A1P20849 921 aa16.34■□□□□ 0.21
AC004540.1-204ENST00000449537 KRT24Q2M2I5 525 aa16.34■□□□□ 0.21
AC004540.1-204ENST00000449537 CERS5Q8N5B7 392 aa16.34■□□□□ 0.21
AC004540.1-204ENST00000449537 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
AC004540.1-204ENST00000449537 CD209Q9NNX6 404 aa16.34■□□□□ 0.21
AC004540.1-204ENST00000449537 ZMYND8Q9ULU4 1186 aaPredicted RBP16.34■□□□□ 0.21
AC004540.1-204ENST00000449537 RIPK4P57078 832 aa16.33■□□□□ 0.2
AC004540.1-204ENST00000449537 SNAPC2Q13487 334 aa16.33■□□□□ 0.2
AC004540.1-204ENST00000449537 SLAIN1Q8ND83 568 aa16.33■□□□□ 0.2
AC004540.1-204ENST00000449537 PAWRQ96IZ0 340 aaKnown RBP16.33■□□□□ 0.2
AC004540.1-204ENST00000449537 SPDYE5A6NIY4 337 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 KLRK1P26718 216 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 AOX1Q06278 1338 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 ECM29Q5VYK3 1845 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 ERO1BQ86YB8 467 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 C7orf61Q8IZ16 206 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 DEFB118Q96PH6 123 aa16.32■□□□□ 0.2
AC004540.1-204ENST00000449537 MYD88Q99836 296 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms