RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 PNMA6EA0A0J9YXQ4 647 aa23.39■■□□□ 1.33
HDAC4-203ENST00000445704 FKBP1AP62942 108 aaKnown RBP23.39■■□□□ 1.33
HDAC4-203ENST00000445704 NBPF9Q3BBW0 867 aa23.39■■□□□ 1.33
HDAC4-203ENST00000445704 ANGEL2Q5VTE6 544 aaKnown RBP23.39■■□□□ 1.33
HDAC4-203ENST00000445704 OGFOD1Q8N543 542 aa23.39■■□□□ 1.33
HDAC4-203ENST00000445704 PANK1Q8TE04 598 aa23.39■■□□□ 1.33
HDAC4-203ENST00000445704 CELF2O95319 508 aaKnown RBP23.38■■□□□ 1.33
HDAC4-203ENST00000445704 IL15P40933 162 aaPredicted RBP23.38■■□□□ 1.33
HDAC4-203ENST00000445704 BCAMP50895 628 aa23.38■■□□□ 1.33
HDAC4-203ENST00000445704 ZNF408Q9H9D4 720 aa23.38■■□□□ 1.33
HDAC4-203ENST00000445704 RCAN3Q9UKA8 241 aa23.38■■□□□ 1.33
HDAC4-203ENST00000445704 ARAP2Q8WZ64 1704 aa23.37■■□□□ 1.33
HDAC4-203ENST00000445704 WNT10BO00744 389 aa23.37■■□□□ 1.33
HDAC4-203ENST00000445704 ZBTB7BO15156 539 aaPredicted RBP23.37■■□□□ 1.33
HDAC4-203ENST00000445704 IFIT1P09914 478 aaKnown RBP23.37■■□□□ 1.33
HDAC4-203ENST00000445704 CAVIN4Q5BKX8 364 aa23.37■■□□□ 1.33
HDAC4-203ENST00000445704 C1orf115Q9H7X2 142 aa23.37■■□□□ 1.33
HDAC4-203ENST00000445704 CEP126Q9P2H0 1117 aa23.37■■□□□ 1.33
HDAC4-203ENST00000445704 ABT1Q9ULW3 272 aaKnown RBP23.37■■□□□ 1.33
HDAC4-203ENST00000445704 RASSF10A6NK89 507 aa23.36■■□□□ 1.33
HDAC4-203ENST00000445704 F8W031 263 aaPredicted RBP23.36■■□□□ 1.33
HDAC4-203ENST00000445704 SLC5A1P13866 664 aa23.36■■□□□ 1.33
HDAC4-203ENST00000445704 ATP2B3Q16720 1220 aa23.36■■□□□ 1.33
HDAC4-203ENST00000445704 VPS37DQ86XT2 251 aa23.36■■□□□ 1.33
HDAC4-203ENST00000445704 LPIN2Q92539 896 aa23.36■■□□□ 1.33
HDAC4-203ENST00000445704 ZBED3Q96IU2 234 aaPredicted RBP23.36■■□□□ 1.33
HDAC4-203ENST00000445704 HDAC9Q9UKV0 1011 aa23.36■■□□□ 1.33
HDAC4-203ENST00000445704 SCAF8Q9UPN6 1271 aaKnown RBP23.36■■□□□ 1.33
HDAC4-203ENST00000445704 MFSD14BQ5SR56 506 aa23.35■■□□□ 1.33
HDAC4-203ENST00000445704 SULF1Q8IWU6 871 aa23.35■■□□□ 1.33
HDAC4-203ENST00000445704 PCDHAC2Q9Y5I4 1007 aa23.35■■□□□ 1.33
HDAC4-203ENST00000445704 TLL2Q9Y6L7 1015 aa23.35■■□□□ 1.33
HDAC4-203ENST00000445704 PITPNM2Q9BZ72 1349 aa23.34■■□□□ 1.33
HDAC4-203ENST00000445704 MMP14P50281 582 aa23.34■■□□□ 1.33
HDAC4-203ENST00000445704 CHAF1AQ13111 956 aaPredicted RBP23.34■■□□□ 1.33
HDAC4-203ENST00000445704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.34■■□□□ 1.33
HDAC4-203ENST00000445704 COL1A1P02452 1464 aaPredicted RBP23.33■■□□□ 1.33
HDAC4-203ENST00000445704 VEGFBP49765 207 aa23.33■■□□□ 1.33
HDAC4-203ENST00000445704 GRIK5Q16478 980 aa23.33■■□□□ 1.33
HDAC4-203ENST00000445704 DEFB115Q30KQ5 88 aa23.33■■□□□ 1.33
HDAC4-203ENST00000445704 TFCP2Q12800 502 aa23.32■■□□□ 1.32
HDAC4-203ENST00000445704 POLA2Q14181 598 aa23.32■■□□□ 1.32
HDAC4-203ENST00000445704 CDCA5Q96FF9 252 aa23.32■■□□□ 1.32
HDAC4-203ENST00000445704 FRAT2O75474 233 aaPredicted RBP23.31■■□□□ 1.32
HDAC4-203ENST00000445704 ATP8B2P98198 1209 aa23.31■■□□□ 1.32
HDAC4-203ENST00000445704 CFAP100Q494V2 611 aa23.31■■□□□ 1.32
HDAC4-203ENST00000445704 SAPCD2Q86UD0 394 aa23.31■■□□□ 1.32
HDAC4-203ENST00000445704 MTMR14Q8NCE2 650 aa23.31■■□□□ 1.32
HDAC4-203ENST00000445704 AOX1Q06278 1338 aa23.31■■□□□ 1.32
HDAC4-203ENST00000445704 ADORA1P30542 326 aa23.3■■□□□ 1.32
HDAC4-203ENST00000445704 DLGAP5Q15398 846 aa23.3■■□□□ 1.32
HDAC4-203ENST00000445704 SSH3Q8TE77 659 aa23.3■■□□□ 1.32
HDAC4-203ENST00000445704 MYH13Q9UKX3 1938 aa23.29■■□□□ 1.32
HDAC4-203ENST00000445704 TTF2Q9UNY4 1162 aaKnown RBP23.29■■□□□ 1.32
HDAC4-203ENST00000445704 ECM29Q5VYK3 1845 aa23.29■■□□□ 1.32
HDAC4-203ENST00000445704 SPDYE2BA6NHP3 402 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 SPDYE6P0CI01 402 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 MS4A1P11836 297 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 PHKA1P46020 1223 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 TIMM10P62072 90 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 MVPQ14764 893 aaKnown RBP23.28■■□□□ 1.32
HDAC4-203ENST00000445704 PRAMEF18Q5VWM3 479 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 CYP4F22Q6NT55 531 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 PRMT6Q96LA8 375 aaPredicted RBP23.28■■□□□ 1.32
HDAC4-203ENST00000445704 COG6Q9Y2V7 657 aa23.28■■□□□ 1.32
HDAC4-203ENST00000445704 A0A1B0GUL7 405 aa23.27■■□□□ 1.32
HDAC4-203ENST00000445704 TBC1D22AQ8WUA7 517 aa23.27■■□□□ 1.32
HDAC4-203ENST00000445704 GBA2Q9HCG7 927 aaPredicted RBP23.27■■□□□ 1.32
HDAC4-203ENST00000445704 WDR33Q9C0J8 1336 aaKnown RBP23.27■■□□□ 1.32
HDAC4-203ENST00000445704 THSD7BQ9C0I4 1608 aa23.26■■□□□ 1.31
HDAC4-203ENST00000445704 G3BP1Q13283 466 aaKnown RBP eCLIP23.26■■□□□ 1.31
HDAC4-203ENST00000445704 C20orf194Q5TEA3 1177 aa23.26■■□□□ 1.31
HDAC4-203ENST00000445704 CEP85Q6P2H3 762 aa23.26■■□□□ 1.31
HDAC4-203ENST00000445704 PAXIP1Q6ZW49 1069 aaPredicted RBP23.26■■□□□ 1.31
HDAC4-203ENST00000445704 CAPNS2Q96L46 248 aa23.26■■□□□ 1.31
HDAC4-203ENST00000445704 YTHDC1Q96MU7 727 aaKnown RBP23.26■■□□□ 1.31
HDAC4-203ENST00000445704 CLRN2A0PK11 232 aa23.25■■□□□ 1.31
HDAC4-203ENST00000445704 RBM5P52756 815 aaKnown RBP eCLIP23.25■■□□□ 1.31
HDAC4-203ENST00000445704 CCDC102BQ68D86 513 aa23.25■■□□□ 1.31
HDAC4-203ENST00000445704 APOBEC3FQ8IUX4 373 aaKnown RBP23.25■■□□□ 1.31
HDAC4-203ENST00000445704 SERPINA10Q9UK55 444 aa23.25■■□□□ 1.31
HDAC4-203ENST00000445704 AKAP2Q9Y2D5 859 aa23.25■■□□□ 1.31
HDAC4-203ENST00000445704 HSPA1AP0DMV8 641 aaKnown RBP23.24■■□□□ 1.31
HDAC4-203ENST00000445704 HSPA1BP0DMV9 641 aaKnown RBP23.24■■□□□ 1.31
HDAC4-203ENST00000445704 CRKP46108 304 aa23.24■■□□□ 1.31
HDAC4-203ENST00000445704 HUNKP57058 714 aa23.24■■□□□ 1.31
HDAC4-203ENST00000445704 GRM1Q13255 1194 aa23.24■■□□□ 1.31
HDAC4-203ENST00000445704 C2orf69Q8N8R5 385 aa23.24■■□□□ 1.31
HDAC4-203ENST00000445704 XAGE2Q96GT9 111 aa23.24■■□□□ 1.31
HDAC4-203ENST00000445704 HHIPL1Q96JK4 782 aa23.24■■□□□ 1.31
HDAC4-203ENST00000445704 GNL3LQ9NVN8 582 aaKnown RBP23.23■■□□□ 1.31
HDAC4-203ENST00000445704 DDX19BQ9UMR2 479 aa23.23■■□□□ 1.31
HDAC4-203ENST00000445704 PAPPA2Q9BXP8 1791 aa23.22■■□□□ 1.31
HDAC4-203ENST00000445704 SURF6O75683 361 aaKnown RBP23.22■■□□□ 1.31
HDAC4-203ENST00000445704 WDR66Q8TBY9 1149 aa23.22■■□□□ 1.31
HDAC4-203ENST00000445704 NOP58Q9Y2X3 529 aaKnown RBP23.22■■□□□ 1.31
HDAC4-203ENST00000445704 SEMA3EO15041 775 aa23.21■■□□□ 1.31
HDAC4-203ENST00000445704 MYO1BO43795 1136 aa23.21■■□□□ 1.31
HDAC4-203ENST00000445704 ECE1P42892 770 aa23.21■■□□□ 1.31
HDAC4-203ENST00000445704 RASGRF1Q13972 1273 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms