RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 JMYQ8N9B5 988 aa29.9■■■□□ 2.38
CPNE1-217ENST00000439669 COPRSQ9NQ92 184 aa29.9■■■□□ 2.38
CPNE1-217ENST00000439669 SASH1O94885 1247 aa29.89■■■□□ 2.38
CPNE1-217ENST00000439669 SLC5A1P13866 664 aa29.89■■■□□ 2.38
CPNE1-217ENST00000439669 MTX1Q13505 466 aa29.89■■■□□ 2.38
CPNE1-217ENST00000439669 CEP126Q9P2H0 1117 aa29.89■■■□□ 2.38
CPNE1-217ENST00000439669 F8W031 263 aaPredicted RBP29.88■■■□□ 2.37
CPNE1-217ENST00000439669 FGFR2P21802 821 aa29.88■■■□□ 2.37
CPNE1-217ENST00000439669 IL15P40933 162 aaPredicted RBP29.88■■■□□ 2.37
CPNE1-217ENST00000439669 MMP14P50281 582 aa29.88■■■□□ 2.37
CPNE1-217ENST00000439669 DLK2Q6UY11 383 aa29.88■■■□□ 2.37
CPNE1-217ENST00000439669 FBXO33Q7Z6M2 555 aa29.88■■■□□ 2.37
CPNE1-217ENST00000439669 IQSEC3Q9UPP2 1182 aaPredicted RBP29.88■■■□□ 2.37
CPNE1-217ENST00000439669 FAM205AQ6ZU69 1335 aa29.88■■■□□ 2.37
CPNE1-217ENST00000439669 FRAT2O75474 233 aaPredicted RBP29.87■■■□□ 2.37
CPNE1-217ENST00000439669 FKBP1AP62942 108 aaKnown RBP29.87■■■□□ 2.37
CPNE1-217ENST00000439669 NBPF9Q3BBW0 867 aa29.87■■■□□ 2.37
CPNE1-217ENST00000439669 POLR2AP24928 1970 aaKnown RBP29.86■■■□□ 2.37
CPNE1-217ENST00000439669 BCAMP50895 628 aa29.86■■■□□ 2.37
CPNE1-217ENST00000439669 DEFB115Q30KQ5 88 aa29.86■■■□□ 2.37
CPNE1-217ENST00000439669 LPIN2Q92539 896 aa29.86■■■□□ 2.37
CPNE1-217ENST00000439669 RCAN3Q9UKA8 241 aa29.86■■■□□ 2.37
CPNE1-217ENST00000439669 RASSF10A6NK89 507 aa29.85■■■□□ 2.37
CPNE1-217ENST00000439669 WNT10BO00744 389 aa29.85■■■□□ 2.37
CPNE1-217ENST00000439669 CHAF1AQ13111 956 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-217ENST00000439669 ATP2B3Q16720 1220 aa29.85■■■□□ 2.37
CPNE1-217ENST00000439669 MFSD14BQ5SR56 506 aa29.85■■■□□ 2.37
CPNE1-217ENST00000439669 PAXIP1Q6ZW49 1069 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-217ENST00000439669 PANK1Q8TE04 598 aa29.84■■■□□ 2.37
CPNE1-217ENST00000439669 TLL2Q9Y6L7 1015 aa29.84■■■□□ 2.37
CPNE1-217ENST00000439669 PITPNM2Q9BZ72 1349 aa29.84■■■□□ 2.37
CPNE1-217ENST00000439669 VEGFBP49765 207 aa29.83■■■□□ 2.37
CPNE1-217ENST00000439669 C1orf115Q9H7X2 142 aa29.83■■■□□ 2.37
CPNE1-217ENST00000439669 PNMA6EA0A0J9YXQ4 647 aa29.82■■■□□ 2.36
CPNE1-217ENST00000439669 DLGAP5Q15398 846 aa29.82■■■□□ 2.36
CPNE1-217ENST00000439669 MS4A1P11836 297 aa29.81■■■□□ 2.36
CPNE1-217ENST00000439669 SCAF8Q9UPN6 1271 aaKnown RBP29.81■■■□□ 2.36
CPNE1-217ENST00000439669 CDCA5Q96FF9 252 aa29.8■■■□□ 2.36
CPNE1-217ENST00000439669 ZBTB7BO15156 539 aaPredicted RBP29.79■■■□□ 2.36
CPNE1-217ENST00000439669 GRM1Q13255 1194 aa29.79■■■□□ 2.36
CPNE1-217ENST00000439669 CFAP100Q494V2 611 aa29.79■■■□□ 2.36
CPNE1-217ENST00000439669 SAPCD2Q86UD0 394 aa29.79■■■□□ 2.36
CPNE1-217ENST00000439669 TTF2Q9UNY4 1162 aaKnown RBP29.79■■■□□ 2.36
CPNE1-217ENST00000439669 ARAP2Q8WZ64 1704 aa29.79■■■□□ 2.36
CPNE1-217ENST00000439669 RBM5P52756 815 aaKnown RBP eCLIP29.78■■■□□ 2.363e-6■■■□□ 15.4
CPNE1-217ENST00000439669 TBC1D22AQ8WUA7 517 aa29.78■■■□□ 2.36
CPNE1-217ENST00000439669 ZBED3Q96IU2 234 aaPredicted RBP29.78■■■□□ 2.36
CPNE1-217ENST00000439669 TFCP2Q12800 502 aa29.77■■■□□ 2.36
CPNE1-217ENST00000439669 GBA2Q9HCG7 927 aaPredicted RBP29.77■■■□□ 2.36
CPNE1-217ENST00000439669 PCDHAC2Q9Y5I4 1007 aa29.77■■■□□ 2.36
CPNE1-217ENST00000439669 WDR33Q9C0J8 1336 aaKnown RBP29.76■■■□□ 2.36
CPNE1-217ENST00000439669 ECE1P42892 770 aa29.76■■■□□ 2.35
CPNE1-217ENST00000439669 G3BP1Q13283 466 aaKnown RBP eCLIP29.76■■■□□ 2.357e-8■□□□□ 11.2
CPNE1-217ENST00000439669 CYP4F22Q6NT55 531 aa29.76■■■□□ 2.35
CPNE1-217ENST00000439669 APOBEC3FQ8IUX4 373 aaKnown RBP29.76■■■□□ 2.35
CPNE1-217ENST00000439669 C2orf69Q8N8R5 385 aa29.76■■■□□ 2.35
CPNE1-217ENST00000439669 MTMR14Q8NCE2 650 aa29.76■■■□□ 2.35
CPNE1-217ENST00000439669 CAPNS2Q96L46 248 aa29.76■■■□□ 2.35
CPNE1-217ENST00000439669 ATP8B2P98198 1209 aa29.75■■■□□ 2.35
CPNE1-217ENST00000439669 GNL3LQ9NVN8 582 aaKnown RBP29.75■■■□□ 2.35
CPNE1-217ENST00000439669 SPDYE2BA6NHP3 402 aa29.74■■■□□ 2.35
CPNE1-217ENST00000439669 MYO1BO43795 1136 aa29.74■■■□□ 2.35
CPNE1-217ENST00000439669 SPDYE6P0CI01 402 aa29.74■■■□□ 2.35
CPNE1-217ENST00000439669 ADORA1P30542 326 aa29.74■■■□□ 2.35
CPNE1-217ENST00000439669 HUNKP57058 714 aa29.74■■■□□ 2.35
CPNE1-217ENST00000439669 POLA2Q14181 598 aa29.74■■■□□ 2.35
CPNE1-217ENST00000439669 AKAP2Q9Y2D5 859 aa29.74■■■□□ 2.35
CPNE1-217ENST00000439669 HSPA1AP0DMV8 641 aaKnown RBP29.73■■■□□ 2.35
CPNE1-217ENST00000439669 HSPA1BP0DMV9 641 aaKnown RBP29.73■■■□□ 2.35
CPNE1-217ENST00000439669 GRIK5Q16478 980 aa29.73■■■□□ 2.35
CPNE1-217ENST00000439669 PRAMEF18Q5VWM3 479 aa29.73■■■□□ 2.35
CPNE1-217ENST00000439669 MYH13Q9UKX3 1938 aa29.73■■■□□ 2.35
CPNE1-217ENST00000439669 A0A1B0GUL7 405 aa29.72■■■□□ 2.35
CPNE1-217ENST00000439669 PHKA1P46020 1223 aa29.72■■■□□ 2.35
CPNE1-217ENST00000439669 MVPQ14764 893 aaKnown RBP29.72■■■□□ 2.35
CPNE1-217ENST00000439669 SSH3Q8TE77 659 aa29.72■■■□□ 2.35
CPNE1-217ENST00000439669 HHIPL1Q96JK4 782 aa29.72■■■□□ 2.35
CPNE1-217ENST00000439669 PRMT6Q96LA8 375 aaPredicted RBP29.72■■■□□ 2.35
CPNE1-217ENST00000439669 SERPINA10Q9UK55 444 aa29.72■■■□□ 2.35
CPNE1-217ENST00000439669 CLRN2A0PK11 232 aa29.71■■■□□ 2.35
CPNE1-217ENST00000439669 TIMM10P62072 90 aa29.71■■■□□ 2.35
CPNE1-217ENST00000439669 OS9Q13438 667 aaPredicted RBP29.71■■■□□ 2.35
CPNE1-217ENST00000439669 WDR66Q8TBY9 1149 aa29.71■■■□□ 2.35
CPNE1-217ENST00000439669 YTHDC1Q96MU7 727 aaKnown RBP29.71■■■□□ 2.35
CPNE1-217ENST00000439669 COG6Q9Y2V7 657 aa29.71■■■□□ 2.35
CPNE1-217ENST00000439669 COL1A1P02452 1464 aaPredicted RBP29.71■■■□□ 2.35
CPNE1-217ENST00000439669 CRKP46108 304 aa29.7■■■□□ 2.35
CPNE1-217ENST00000439669 VEZTQ9HBM0 779 aa29.7■■■□□ 2.35
CPNE1-217ENST00000439669 ECM29Q5VYK3 1845 aa29.69■■■□□ 2.34
CPNE1-217ENST00000439669 CCDC102BQ68D86 513 aa29.69■■■□□ 2.34
CPNE1-217ENST00000439669 NEUROD6Q96NK8 337 aa29.69■■■□□ 2.34
CPNE1-217ENST00000439669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.69■■■□□ 2.34
CPNE1-217ENST00000439669 AOX1Q06278 1338 aa29.69■■■□□ 2.34
CPNE1-217ENST00000439669 SURF6O75683 361 aaKnown RBP29.68■■■□□ 2.34
CPNE1-217ENST00000439669 NF2P35240 595 aa29.68■■■□□ 2.34
CPNE1-217ENST00000439669 CEP85Q6P2H3 762 aa29.68■■■□□ 2.34
CPNE1-217ENST00000439669 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.68■■■□□ 2.34
CPNE1-217ENST00000439669 XAGE2Q96GT9 111 aa29.68■■■□□ 2.34
CPNE1-217ENST00000439669 DENND2AQ9ULE3 1009 aa29.68■■■□□ 2.34
CPNE1-217ENST00000439669 DDX19BQ9UMR2 479 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms