RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 DEFB115Q30KQ5 88 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 LPIN2Q92539 896 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 SIL1Q9H173 461 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 CEP126Q9P2H0 1117 aa12.22□□□□□ -0.45
HDAC6-207ENST00000430858 ASTN2O75129 1339 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-207ENST00000430858 WNT10BO00744 389 aa12.21□□□□□ -0.45
HDAC6-207ENST00000430858 SLC5A1P13866 664 aa12.21□□□□□ -0.45
HDAC6-207ENST00000430858 ANGEL2Q5VTE6 544 aaKnown RBP12.21□□□□□ -0.45
HDAC6-207ENST00000430858 CERS5Q8N5B7 392 aa12.21□□□□□ -0.45
HDAC6-207ENST00000430858 ZNF408Q9H9D4 720 aa12.21□□□□□ -0.45
HDAC6-207ENST00000430858 PA2G4Q9UQ80 394 aaKnown RBP12.21□□□□□ -0.45
HDAC6-207ENST00000430858 TLL2Q9Y6L7 1015 aa12.21□□□□□ -0.45
HDAC6-207ENST00000430858 ADM5C9JUS6 153 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-207ENST00000430858 MS4A1P11836 297 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 BCAMP50895 628 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 NBPF9Q3BBW0 867 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 JAG2Q9Y219 1238 aa12.2□□□□□ -0.46
HDAC6-207ENST00000430858 RLBP1P12271 317 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 ECE1P42892 770 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 VEGFBP49765 207 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 DLGAP5Q15398 846 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 PIAS4Q8N2W9 510 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-207ENST00000430858 MTMR14Q8NCE2 650 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 TBC1D22AQ8WUA7 517 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 HHIPL1Q96JK4 782 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 RCAN3Q9UKA8 241 aa12.19□□□□□ -0.46
HDAC6-207ENST00000430858 ZNF646O15015 1829 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-207ENST00000430858 PNMA6EA0A0J9YXQ4 647 aa12.18□□□□□ -0.46
HDAC6-207ENST00000430858 F8W031 263 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-207ENST00000430858 ZBTB7BO15156 539 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-207ENST00000430858 DLK2Q6UY11 383 aa12.18□□□□□ -0.46
HDAC6-207ENST00000430858 ZBED3Q96IU2 234 aaPredicted RBP12.18□□□□□ -0.46
HDAC6-207ENST00000430858 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
HDAC6-207ENST00000430858 MYO1BO43795 1136 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 ATP8B2P98198 1209 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 CHAF1AQ13111 956 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-207ENST00000430858 CFAP100Q494V2 611 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-207ENST00000430858 APOBEC3FQ8IUX4 373 aaKnown RBP12.17□□□□□ -0.46
HDAC6-207ENST00000430858 C2orf69Q8N8R5 385 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 CDCA5Q96FF9 252 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 GBA2Q9HCG7 927 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-207ENST00000430858 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
HDAC6-207ENST00000430858 IQSEC3Q9UPP2 1182 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-207ENST00000430858 AKAP2Q9Y2D5 859 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
HDAC6-207ENST00000430858 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
HDAC6-207ENST00000430858 ZBTB22O15209 634 aa12.16□□□□□ -0.46
HDAC6-207ENST00000430858 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
HDAC6-207ENST00000430858 RBM5P52756 815 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDAC6-207ENST00000430858 G3BP1Q13283 466 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDAC6-207ENST00000430858 POLA2Q14181 598 aa12.16□□□□□ -0.46
HDAC6-207ENST00000430858 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
HDAC6-207ENST00000430858 CAPNS2Q96L46 248 aa12.16□□□□□ -0.46
HDAC6-207ENST00000430858 GNL3LQ9NVN8 582 aaKnown RBP12.16□□□□□ -0.46
HDAC6-207ENST00000430858 SERPINA10Q9UK55 444 aa12.16□□□□□ -0.46
HDAC6-207ENST00000430858 SEMA3EO15041 775 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 HSPA1AP0DMV8 641 aaKnown RBP12.15□□□□□ -0.46
HDAC6-207ENST00000430858 HSPA1BP0DMV9 641 aaKnown RBP12.15□□□□□ -0.46
HDAC6-207ENST00000430858 HUNKP57058 714 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 FKBP1BP68106 108 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 HDLBPQ00341 1268 aaKnown RBP12.15□□□□□ -0.46
HDAC6-207ENST00000430858 TFCP2Q12800 502 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 WDR66Q8TBY9 1149 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 SSH3Q8TE77 659 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 PRMT6Q96LA8 375 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-207ENST00000430858 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
HDAC6-207ENST00000430858 MAST3O60307 1309 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 NF2P35240 595 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 CRKP46108 304 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 TIMM10P62072 90 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-207ENST00000430858 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
HDAC6-207ENST00000430858 CCDC102BQ68D86 513 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-207ENST00000430858 MRIQ9BWK5 157 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 DENND2AQ9ULE3 1009 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 SCAF8Q9UPN6 1271 aaKnown RBP12.14□□□□□ -0.47
HDAC6-207ENST00000430858 PCDHAC2Q9Y5I4 1007 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 PPP2R3BQ9Y5P8 575 aa12.14□□□□□ -0.47
HDAC6-207ENST00000430858 ADORA1P30542 326 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 MAP2K2P36507 400 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 PHKA1P46020 1223 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 GRM1Q13255 1194 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 GRIK5Q16478 980 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 DEFB129Q9H1M3 183 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 CHMP4BQ9H444 224 aaKnown RBP12.13□□□□□ -0.47
HDAC6-207ENST00000430858 DDX19BQ9UMR2 479 aa12.13□□□□□ -0.47
HDAC6-207ENST00000430858 COL1A1P02452 1464 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-207ENST00000430858 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms