RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
LINC00458-202ENST00000427299 CCDC97Q96F63 343 aaPredicted RBP9.33□□□□□ -0.92
LINC00458-202ENST00000427299 MEGF11A6BM72 1044 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 PAX4O43316 350 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 MPSTP25325 297 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 C19orf57Q0VDD7 668 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 C8orf34Q49A92 452 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 FMNL2Q96PY5 1086 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 KCNF1Q9H3M0 494 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 SERPINA10Q9UK55 444 aa9.32□□□□□ -0.92
LINC00458-202ENST00000427299 FDX2Q6P4F2 183 aa9.31□□□□□ -0.92
LINC00458-202ENST00000427299 VN1R5Q7Z5H4 357 aa9.31□□□□□ -0.92
LINC00458-202ENST00000427299 NXPE3Q969Y0 559 aa9.31□□□□□ -0.92
LINC00458-202ENST00000427299 ZKSCAN3Q9BRR0 538 aa9.31□□□□□ -0.92
LINC00458-202ENST00000427299 GTF3C2Q8WUA4 911 aaPredicted RBP9.3□□□□□ -0.92
LINC00458-202ENST00000427299 BSNDQ8WZ55 320 aa9.3□□□□□ -0.92
LINC00458-202ENST00000427299 OSMRQ99650 979 aa9.3□□□□□ -0.92
LINC00458-202ENST00000427299 SOX1O00570 391 aaPredicted RBP9.29□□□□□ -0.92
LINC00458-202ENST00000427299 TAL1P17542 331 aaPredicted RBP9.29□□□□□ -0.92
LINC00458-202ENST00000427299 ARL4DP49703 201 aa9.29□□□□□ -0.92
LINC00458-202ENST00000427299 TTC16Q8NEE8 873 aa9.29□□□□□ -0.92
LINC00458-202ENST00000427299 POLIQ9UNA4 740 aa9.29□□□□□ -0.92
LINC00458-202ENST00000427299 EREGO14944 169 aa9.28□□□□□ -0.92
LINC00458-202ENST00000427299 TNFRSF21O75509 655 aa9.28□□□□□ -0.92
LINC00458-202ENST00000427299 MAP4P27816 1152 aaKnown RBP9.28□□□□□ -0.92
LINC00458-202ENST00000427299 IKBKEQ14164 716 aa9.28□□□□□ -0.92
LINC00458-202ENST00000427299 TMPRSS13Q9BYE2 586 aa9.28□□□□□ -0.92
LINC00458-202ENST00000427299 GAS2O43903 313 aaKnown RBP9.27□□□□□ -0.93
LINC00458-202ENST00000427299 TIAF1O95411 115 aa9.27□□□□□ -0.93
LINC00458-202ENST00000427299 NPR3P17342 541 aa9.27□□□□□ -0.93
LINC00458-202ENST00000427299 SSFA2P28290 1259 aa9.27□□□□□ -0.93
LINC00458-202ENST00000427299 MTMR3Q13615 1198 aa9.27□□□□□ -0.93
LINC00458-202ENST00000427299 SGO2Q562F6 1265 aa9.27□□□□□ -0.93
LINC00458-202ENST00000427299 BHLHE41Q9C0J9 482 aaPredicted RBP9.27□□□□□ -0.93
LINC00458-202ENST00000427299 SOX17Q9H6I2 414 aaPredicted RBP9.27□□□□□ -0.93
LINC00458-202ENST00000427299 SUGCTQ9HAC7 445 aa9.27□□□□□ -0.93
LINC00458-202ENST00000427299 LOC100289279A0A1B0GTE1 492 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 WDR64B1ANS9 1081 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 PHACTR2O75167 634 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 EDN3P14138 238 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 ALKBH2Q6NS38 261 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 SMG8Q8ND04 991 aaKnown RBP9.26□□□□□ -0.93
LINC00458-202ENST00000427299 SNX29Q8TEQ0 813 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 MFSD14AQ96MC6 490 aa9.26□□□□□ -0.93
LINC00458-202ENST00000427299 DLGAP3O95886 979 aa9.25□□□□□ -0.93
LINC00458-202ENST00000427299 WNT11O96014 354 aa9.25□□□□□ -0.93
LINC00458-202ENST00000427299 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
LINC00458-202ENST00000427299 TXKP42681 527 aa9.25□□□□□ -0.93
LINC00458-202ENST00000427299 PEAR1Q5VY43 1037 aaPredicted RBP9.25□□□□□ -0.93
LINC00458-202ENST00000427299 NUTM2GQ5VZR2 741 aa9.25□□□□□ -0.93
LINC00458-202ENST00000427299 USP26Q9BXU7 913 aa9.24□□□□□ -0.93
LINC00458-202ENST00000427299 PIM2Q9P1W9 311 aa9.24□□□□□ -0.93
LINC00458-202ENST00000427299 FOXD3Q9UJU5 478 aaPredicted RBP9.24□□□□□ -0.93
LINC00458-202ENST00000427299 ESRRAP11474 423 aaPredicted RBP9.23□□□□□ -0.93
LINC00458-202ENST00000427299 EHHADHQ08426 723 aa9.23□□□□□ -0.93
LINC00458-202ENST00000427299 C14orf37Q86TY3 774 aa9.23□□□□□ -0.93
LINC00458-202ENST00000427299 C12orf50Q8NA57 414 aaPredicted RBP9.23□□□□□ -0.93
LINC00458-202ENST00000427299 CYP4F12Q9HCS2 524 aa9.23□□□□□ -0.93
LINC00458-202ENST00000427299 LATS2Q9NRM7 1088 aa9.23□□□□□ -0.93
LINC00458-202ENST00000427299 F13BP05160 661 aa9.22□□□□□ -0.93
LINC00458-202ENST00000427299 USP5P45974 858 aa9.22□□□□□ -0.93
LINC00458-202ENST00000427299 FZD6O60353 706 aa9.21□□□□□ -0.94
LINC00458-202ENST00000427299 MSMPQ1L6U9 139 aa9.21□□□□□ -0.94
LINC00458-202ENST00000427299 ASAP3Q8TDY4 903 aa9.21□□□□□ -0.94
LINC00458-202ENST00000427299 NRSN2Q9GZP1 204 aa9.21□□□□□ -0.94
LINC00458-202ENST00000427299 ADGRE2Q9UHX3 823 aa9.21□□□□□ -0.94
LINC00458-202ENST00000427299 ARID3CA6NKF2 412 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 FAM13AO94988 1023 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 DRD2P14416 443 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 RXRBP28702 533 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 CPSF6Q16630 551 aaKnown RBP eCLIP9.2□□□□□ -0.94
LINC00458-202ENST00000427299 EXOSC6Q5RKV6 272 aaKnown RBP9.2□□□□□ -0.94
LINC00458-202ENST00000427299 GJD3Q8N144 294 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 FBXL6Q8N531 539 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 GIMAP7Q8NHV1 300 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 AMOTL2Q9Y2J4 779 aa9.2□□□□□ -0.94
LINC00458-202ENST00000427299 FAM95CA0A1B0GW59 222 aa9.19□□□□□ -0.94
LINC00458-202ENST00000427299 FOSL1P15407 271 aa9.19□□□□□ -0.94
LINC00458-202ENST00000427299 AAMPQ13685 434 aa9.19□□□□□ -0.94
LINC00458-202ENST00000427299 PHLDB3Q6NSJ2 640 aa9.19□□□□□ -0.94
LINC00458-202ENST00000427299 C2CD4AQ8NCU7 369 aaPredicted RBP9.19□□□□□ -0.94
LINC00458-202ENST00000427299 ATG3Q9NT62 314 aa9.19□□□□□ -0.94
LINC00458-202ENST00000427299 LEMD3Q9Y2U8 911 aa9.19□□□□□ -0.94
LINC00458-202ENST00000427299 RNF114Q9Y508 228 aa9.19□□□□□ -0.94
LINC00458-202ENST00000427299 METTL12A8MUP2 240 aa9.18□□□□□ -0.94
LINC00458-202ENST00000427299 CDPF1Q6NVV7 123 aa9.18□□□□□ -0.94
LINC00458-202ENST00000427299 SHISA5Q8N114 240 aa9.18□□□□□ -0.94
LINC00458-202ENST00000427299 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
LINC00458-202ENST00000427299 YBX3P16989 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
LINC00458-202ENST00000427299 GSTM4Q03013 218 aa9.17□□□□□ -0.94
LINC00458-202ENST00000427299 SF3B2Q13435 895 aaKnown RBP9.17□□□□□ -0.94
LINC00458-202ENST00000427299 PAOXQ6QHF9 649 aa9.17□□□□□ -0.94
LINC00458-202ENST00000427299 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
LINC00458-202ENST00000427299 FBLIM1Q8WUP2 373 aa9.17□□□□□ -0.94
LINC00458-202ENST00000427299 OSBPL1AQ9BXW6 950 aa9.17□□□□□ -0.94
LINC00458-202ENST00000427299 CCDC87Q9NVE4 849 aa9.17□□□□□ -0.94
LINC00458-202ENST00000427299 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
LINC00458-202ENST00000427299 PRNPP04156 253 aa9.16□□□□□ -0.94
LINC00458-202ENST00000427299 USP11P51784 963 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms