RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 HIBADHP31937 336 aaKnown RBP27■■□□□ 1.91
CDCP1-202ENST00000425231 CTCFP49711 727 aaPredicted RBP27■■□□□ 1.91
CDCP1-202ENST00000425231 PDE8BO95263 885 aa26.99■■□□□ 1.91
CDCP1-202ENST00000425231 UBTFL1P0CB47 393 aaPredicted RBP26.99■■□□□ 1.91
CDCP1-202ENST00000425231 METTL24Q5JXM2 366 aa26.99■■□□□ 1.91
CDCP1-202ENST00000425231 JAG2Q9Y219 1238 aa26.99■■□□□ 1.91
CDCP1-202ENST00000425231 FAM205AQ6ZU69 1335 aa26.99■■□□□ 1.91
CDCP1-202ENST00000425231 KIF16BQ96L93 1317 aa26.99■■□□□ 1.91
CDCP1-202ENST00000425231 HNRNPUQ00839 825 aaKnown RBP eCLIP26.98■■□□□ 1.91
CDCP1-202ENST00000425231 PTPN12Q05209 780 aaKnown RBP26.98■■□□□ 1.91
CDCP1-202ENST00000425231 PRDM10Q9NQV6 1147 aa26.98■■□□□ 1.91
CDCP1-202ENST00000425231 INTS3Q68E01 1043 aaKnown RBP26.97■■□□□ 1.91
CDCP1-202ENST00000425231 RGMBQ6NW40 437 aa26.97■■□□□ 1.91
CDCP1-202ENST00000425231 FBXO33Q7Z6M2 555 aa26.97■■□□□ 1.91
CDCP1-202ENST00000425231 MTMR14Q8NCE2 650 aa26.97■■□□□ 1.91
CDCP1-202ENST00000425231 FAM155AB1AL88 458 aaPredicted RBP26.96■■□□□ 1.91
CDCP1-202ENST00000425231 PRAMEF18Q5VWM3 479 aa26.96■■□□□ 1.91
CDCP1-202ENST00000425231 TNS4Q8IZW8 715 aa26.96■■□□□ 1.91
CDCP1-202ENST00000425231 F8W031 263 aaPredicted RBP26.95■■□□□ 1.9
CDCP1-202ENST00000425231 EYA2O00167 538 aa26.95■■□□□ 1.9
CDCP1-202ENST00000425231 BCAR3O75815 825 aa26.95■■□□□ 1.9
CDCP1-202ENST00000425231 HSPA8P11142 646 aaKnown RBP26.95■■□□□ 1.9
CDCP1-202ENST00000425231 LBX1P52954 281 aa26.95■■□□□ 1.9
CDCP1-202ENST00000425231 DLGAP5Q15398 846 aa26.95■■□□□ 1.9
CDCP1-202ENST00000425231 ZIC5Q96T25 663 aa26.95■■□□□ 1.9
CDCP1-202ENST00000425231 MEIS3Q99687 375 aa26.95■■□□□ 1.9
CDCP1-202ENST00000425231 PCDHAC2Q9Y5I4 1007 aa26.95■■□□□ 1.9
CDCP1-202ENST00000425231 NOGQ13253 232 aa26.94■■□□□ 1.9
CDCP1-202ENST00000425231 LRRFIP2Q9Y608 721 aaKnown RBP26.94■■□□□ 1.9
CDCP1-202ENST00000425231 FGFR2P21802 821 aa26.93■■□□□ 1.9
CDCP1-202ENST00000425231 FKBP1BP68106 108 aa26.93■■□□□ 1.9
CDCP1-202ENST00000425231 ATG9AQ7Z3C6 839 aa26.93■■□□□ 1.9
CDCP1-202ENST00000425231 TRIM27P14373 513 aa26.92■■□□□ 1.9
CDCP1-202ENST00000425231 ZNF157P51786 506 aaPredicted RBP26.92■■□□□ 1.9
CDCP1-202ENST00000425231 MFSD14BQ5SR56 506 aa26.92■■□□□ 1.9
CDCP1-202ENST00000425231 CCDC102AQ96A19 550 aa26.92■■□□□ 1.9
CDCP1-202ENST00000425231 BEGAINQ9BUH8 593 aa26.92■■□□□ 1.9
CDCP1-202ENST00000425231 HDAC5Q9UQL6 1122 aa26.92■■□□□ 1.9
CDCP1-202ENST00000425231 IPO8O15397 1037 aaKnown RBP26.91■■□□□ 1.9
CDCP1-202ENST00000425231 CFAP100Q494V2 611 aa26.91■■□□□ 1.9
CDCP1-202ENST00000425231 CAVIN4Q5BKX8 364 aa26.91■■□□□ 1.9
CDCP1-202ENST00000425231 APOBEC3FQ8IUX4 373 aaKnown RBP26.91■■□□□ 1.9
CDCP1-202ENST00000425231 PRMT6Q96LA8 375 aaPredicted RBP26.91■■□□□ 1.9
CDCP1-202ENST00000425231 TNNQ9UQP3 1299 aa26.91■■□□□ 1.9
CDCP1-202ENST00000425231 PAPPA2Q9BXP8 1791 aa26.91■■□□□ 1.9
CDCP1-202ENST00000425231 SPDYE2BA6NHP3 402 aa26.9■■□□□ 1.9
CDCP1-202ENST00000425231 SPDYE6P0CI01 402 aa26.9■■□□□ 1.9
CDCP1-202ENST00000425231 PUM3Q15397 648 aaKnown RBP26.9■■□□□ 1.9
CDCP1-202ENST00000425231 ATF7IPQ6VMQ6 1270 aa26.9■■□□□ 1.9
CDCP1-202ENST00000425231 VPS37DQ86XT2 251 aa26.9■■□□□ 1.9
CDCP1-202ENST00000425231 FBXO3Q9UK99 471 aa26.9■■□□□ 1.9
CDCP1-202ENST00000425231 IQSEC3Q9UPP2 1182 aaPredicted RBP26.9■■□□□ 1.9
CDCP1-202ENST00000425231 BCAMP50895 628 aa26.9■■□□□ 1.9
CDCP1-202ENST00000425231 MOB2Q70IA6 237 aa26.9■■□□□ 1.9
CDCP1-202ENST00000425231 FRAT1Q92837 279 aaPredicted RBP26.9■■□□□ 1.9
CDCP1-202ENST00000425231 ECM29Q5VYK3 1845 aa26.89■■□□□ 1.9
CDCP1-202ENST00000425231 CIAO1O76071 339 aa26.89■■□□□ 1.89
CDCP1-202ENST00000425231 AOX1Q06278 1338 aa26.88■■□□□ 1.89
CDCP1-202ENST00000425231 SLC10A3P09131 477 aa26.88■■□□□ 1.89
CDCP1-202ENST00000425231 IFIT1P09914 478 aaKnown RBP26.88■■□□□ 1.89
CDCP1-202ENST00000425231 SIL1Q9H173 461 aa26.88■■□□□ 1.89
CDCP1-202ENST00000425231 TTF2Q9UNY4 1162 aaKnown RBP26.88■■□□□ 1.89
CDCP1-202ENST00000425231 ARAP2Q8WZ64 1704 aa26.87■■□□□ 1.89
CDCP1-202ENST00000425231 GNAI3P08754 354 aa26.87■■□□□ 1.89
CDCP1-202ENST00000425231 LPIN2Q92539 896 aa26.87■■□□□ 1.89
CDCP1-202ENST00000425231 DEFB129Q9H1M3 183 aa26.87■■□□□ 1.89
CDCP1-202ENST00000425231 UBE2Q2LH0YL09 131 aa26.86■■□□□ 1.89
CDCP1-202ENST00000425231 KIF23Q02241 960 aaPredicted RBP26.86■■□□□ 1.89
CDCP1-202ENST00000425231 GRIK5Q16478 980 aa26.86■■□□□ 1.89
CDCP1-202ENST00000425231 TSKSQ9UJT2 592 aa26.86■■□□□ 1.89
CDCP1-202ENST00000425231 SERPINA10Q9UK55 444 aa26.86■■□□□ 1.89
CDCP1-202ENST00000425231 PA2G4Q9UQ80 394 aaKnown RBP26.86■■□□□ 1.89
CDCP1-202ENST00000425231 CLRN2A0PK11 232 aa26.85■■□□□ 1.89
CDCP1-202ENST00000425231 CA12O43570 354 aa26.85■■□□□ 1.89
CDCP1-202ENST00000425231 MYO1BO43795 1136 aa26.85■■□□□ 1.89
CDCP1-202ENST00000425231 NF2P35240 595 aa26.85■■□□□ 1.89
CDCP1-202ENST00000425231 RBM5P52756 815 aaKnown RBP eCLIP26.85■■□□□ 1.89
CDCP1-202ENST00000425231 CHAF1AQ13111 956 aaPredicted RBP26.85■■□□□ 1.89
CDCP1-202ENST00000425231 CLUAP1Q96AJ1 413 aa26.85■■□□□ 1.89
CDCP1-202ENST00000425231 COPRSQ9NQ92 184 aa26.85■■□□□ 1.89
CDCP1-202ENST00000425231 COL1A1P02452 1464 aaPredicted RBP26.85■■□□□ 1.89
CDCP1-202ENST00000425231 FRAT2O75474 233 aaPredicted RBP26.84■■□□□ 1.89
CDCP1-202ENST00000425231 SLC5A1P13866 664 aa26.84■■□□□ 1.89
CDCP1-202ENST00000425231 RASAL3Q86YV0 1011 aa26.84■■□□□ 1.89
CDCP1-202ENST00000425231 MTX1Q13505 466 aa26.83■■□□□ 1.89
CDCP1-202ENST00000425231 TBC1D22AQ8WUA7 517 aa26.83■■□□□ 1.89
CDCP1-202ENST00000425231 CEP126Q9P2H0 1117 aa26.83■■□□□ 1.89
CDCP1-202ENST00000425231 ZBED9Q6R2W3 1325 aa26.83■■□□□ 1.89
CDCP1-202ENST00000425231 IL15P40933 162 aaPredicted RBP26.82■■□□□ 1.88
CDCP1-202ENST00000425231 TTLL12Q14166 644 aaPredicted RBP26.82■■□□□ 1.88
CDCP1-202ENST00000425231 PPP2R3BQ9Y5P8 575 aa26.82■■□□□ 1.88
CDCP1-202ENST00000425231 CRKP46108 304 aa26.82■■□□□ 1.88
CDCP1-202ENST00000425231 ZKSCAN2Q63HK3 967 aa26.82■■□□□ 1.88
CDCP1-202ENST00000425231 CSRNP1Q96S65 589 aa26.82■■□□□ 1.88
CDCP1-202ENST00000425231 ATP2B3Q16720 1220 aa26.81■■□□□ 1.88
CDCP1-202ENST00000425231 DZIP1LQ8IYY4 767 aaKnown RBP26.81■■□□□ 1.88
CDCP1-202ENST00000425231 TDRD3Q9H7E2 651 aaKnown RBP26.81■■□□□ 1.88
CDCP1-202ENST00000425231 VEZTQ9HBM0 779 aa26.81■■□□□ 1.88
CDCP1-202ENST00000425231 SRGAP3O43295 1099 aa26.8■■□□□ 1.88
CDCP1-202ENST00000425231 HDLBPQ00341 1268 aaKnown RBP26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms