RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 JAG2Q9Y219 1238 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 TLL2Q9Y6L7 1015 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 MYH13Q9UKX3 1938 aa13.95□□□□□ -0.18
RFFL-204ENST00000414419 ASTN2O75129 1339 aaPredicted RBP13.94□□□□□ -0.18
RFFL-204ENST00000414419 ADM5C9JUS6 153 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 F8W031 263 aaPredicted RBP13.94□□□□□ -0.18
RFFL-204ENST00000414419 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 CIAO1O76071 339 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 IL15P40933 162 aaPredicted RBP13.94□□□□□ -0.18
RFFL-204ENST00000414419 ECE1P42892 770 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 GRM1Q13255 1194 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 DLGAP5Q15398 846 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 DZIP1LQ8IYY4 767 aaKnown RBP13.94□□□□□ -0.18
RFFL-204ENST00000414419 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 C2orf69Q8N8R5 385 aa13.94□□□□□ -0.18
RFFL-204ENST00000414419 PITPNM2Q9BZ72 1349 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 WNT10BO00744 389 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 FBXO33Q7Z6M2 555 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 ITPRIPQ8IWB1 547 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 CERS5Q8N5B7 392 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 LPIN2Q92539 896 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 COPRSQ9NQ92 184 aa13.93□□□□□ -0.18
RFFL-204ENST00000414419 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
RFFL-204ENST00000414419 FAM205AQ6ZU69 1335 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
RFFL-204ENST00000414419 ECM29Q5VYK3 1845 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 MYO1BO43795 1136 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 MS4A1P11836 297 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 RBM5P52756 815 aaKnown RBP eCLIP13.92□□□□□ -0.18
RFFL-204ENST00000414419 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
RFFL-204ENST00000414419 ATP2B3Q16720 1220 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 DLK2Q6UY11 383 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 ATG9AQ7Z3C6 839 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 SAPCD2Q86UD0 394 aa13.92□□□□□ -0.18
RFFL-204ENST00000414419 GBA2Q9HCG7 927 aaPredicted RBP13.92□□□□□ -0.18
RFFL-204ENST00000414419 PA2G4Q9UQ80 394 aaKnown RBP13.92□□□□□ -0.18
RFFL-204ENST00000414419 PCNTO95613 3336 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 HSPA1AP0DMV8 641 aaKnown RBP13.91□□□□□ -0.18
RFFL-204ENST00000414419 HSPA1BP0DMV9 641 aaKnown RBP13.91□□□□□ -0.18
RFFL-204ENST00000414419 FGFR2P21802 821 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 BCAMP50895 628 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 HUNKP57058 714 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 MTX1Q13505 466 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 CYP4F22Q6NT55 531 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 APOBEC3FQ8IUX4 373 aaKnown RBP13.91□□□□□ -0.18
RFFL-204ENST00000414419 TBC1D22AQ8WUA7 517 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 CAPNS2Q96L46 248 aa13.91□□□□□ -0.18
RFFL-204ENST00000414419 NF2P35240 595 aa13.9□□□□□ -0.18
RFFL-204ENST00000414419 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
RFFL-204ENST00000414419 AIDAQ96BJ3 306 aa13.9□□□□□ -0.18
RFFL-204ENST00000414419 HHIPL1Q96JK4 782 aa13.9□□□□□ -0.18
RFFL-204ENST00000414419 GNL3LQ9NVN8 582 aaKnown RBP13.9□□□□□ -0.18
RFFL-204ENST00000414419 TTF2Q9UNY4 1162 aaKnown RBP13.9□□□□□ -0.18
RFFL-204ENST00000414419 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
RFFL-204ENST00000414419 ARAP2Q8WZ64 1704 aa13.9□□□□□ -0.18
RFFL-204ENST00000414419 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
RFFL-204ENST00000414419 MTMR14Q8NCE2 650 aa13.89□□□□□ -0.19
RFFL-204ENST00000414419 SCAF8Q9UPN6 1271 aaKnown RBP13.89□□□□□ -0.19
RFFL-204ENST00000414419 RLBP1P12271 317 aa13.88□□□□□ -0.19
RFFL-204ENST00000414419 MAP2K1Q02750 393 aaPredicted RBP13.88□□□□□ -0.19
RFFL-204ENST00000414419 TTLL12Q14166 644 aaPredicted RBP13.88□□□□□ -0.19
RFFL-204ENST00000414419 ZBED3Q96IU2 234 aaPredicted RBP13.88□□□□□ -0.19
RFFL-204ENST00000414419 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
RFFL-204ENST00000414419 SERPINA10Q9UK55 444 aa13.88□□□□□ -0.19
RFFL-204ENST00000414419 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
RFFL-204ENST00000414419 PNMA6EA0A0J9YXQ4 647 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 ZBTB7BO15156 539 aaPredicted RBP13.87□□□□□ -0.19
RFFL-204ENST00000414419 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 MAP2K2P36507 400 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 FKBP1BP68106 108 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 PRAMEF18Q5VWM3 479 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 RGMBQ6NW40 437 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 WDR66Q8TBY9 1149 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 PRMT6Q96LA8 375 aaPredicted RBP13.87□□□□□ -0.19
RFFL-204ENST00000414419 VEZTQ9HBM0 779 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 MAST3O60307 1309 aa13.87□□□□□ -0.19
RFFL-204ENST00000414419 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 ZNF157P51786 506 aaPredicted RBP13.86□□□□□ -0.19
RFFL-204ENST00000414419 TIMM10P62072 90 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 ATP8B2P98198 1209 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 TFCP2Q12800 502 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 OS9Q13438 667 aaPredicted RBP13.86□□□□□ -0.19
RFFL-204ENST00000414419 PANK1Q8TE04 598 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 CCDC102AQ96A19 550 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
RFFL-204ENST00000414419 A0A1B0GUL7 405 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 SEMA3EO15041 775 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 AOC2O75106 756 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 CRKP46108 304 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 HDLBPQ00341 1268 aaKnown RBP13.85□□□□□ -0.19
RFFL-204ENST00000414419 NOGQ13253 232 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
RFFL-204ENST00000414419 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms