RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 CDCA5Q96FF9 252 aa32.89■■■□□ 2.86
VEGFA-207ENST00000413642 IQSEC3Q9UPP2 1182 aaPredicted RBP32.89■■■□□ 2.86
VEGFA-207ENST00000413642 PCDHAC2Q9Y5I4 1007 aa32.89■■■□□ 2.86
VEGFA-207ENST00000413642 TRPM7Q96QT4 1865 aa32.88■■■□□ 2.85
VEGFA-207ENST00000413642 FBXO33Q7Z6M2 555 aa32.88■■■□□ 2.85
VEGFA-207ENST00000413642 HDAC9Q9UKV0 1011 aa32.88■■■□□ 2.85
VEGFA-207ENST00000413642 PA2G4Q9UQ80 394 aaKnown RBP32.88■■■□□ 2.85
VEGFA-207ENST00000413642 ZKSCAN2Q63HK3 967 aa32.87■■■□□ 2.85
VEGFA-207ENST00000413642 ZBED3Q96IU2 234 aaPredicted RBP32.87■■■□□ 2.85
VEGFA-207ENST00000413642 FAM205AQ6ZU69 1335 aa32.86■■■□□ 2.85
VEGFA-207ENST00000413642 FGFR2P21802 821 aa32.86■■■□□ 2.85
VEGFA-207ENST00000413642 PRAMEF18Q5VWM3 479 aa32.86■■■□□ 2.85
VEGFA-207ENST00000413642 GBA2Q9HCG7 927 aaPredicted RBP32.86■■■□□ 2.85
VEGFA-207ENST00000413642 AOC2O75106 756 aa32.85■■■□□ 2.85
VEGFA-207ENST00000413642 GNAI3P08754 354 aa32.85■■■□□ 2.85
VEGFA-207ENST00000413642 BCAMP50895 628 aa32.85■■■□□ 2.85
VEGFA-207ENST00000413642 TMEM57Q8N5G2 664 aa32.85■■■□□ 2.85
VEGFA-207ENST00000413642 HDAC5Q9UQL6 1122 aa32.85■■■□□ 2.85
VEGFA-207ENST00000413642 PITPNM2Q9BZ72 1349 aa32.84■■■□□ 2.85
VEGFA-207ENST00000413642 ECE1P42892 770 aa32.84■■■□□ 2.85
VEGFA-207ENST00000413642 HUNKP57058 714 aa32.84■■■□□ 2.85
VEGFA-207ENST00000413642 FKBP1AP62942 108 aaKnown RBP32.84■■■□□ 2.85
VEGFA-207ENST00000413642 PUM3Q15397 648 aaKnown RBP32.84■■■□□ 2.85
VEGFA-207ENST00000413642 VPS37DQ86XT2 251 aa32.83■■■□□ 2.85
VEGFA-207ENST00000413642 POLR2AP24928 1970 aaKnown RBP32.82■■■□□ 2.84
VEGFA-207ENST00000413642 FOXN1O15353 648 aa32.82■■■□□ 2.84
VEGFA-207ENST00000413642 MMP14P50281 582 aa32.82■■■□□ 2.84
VEGFA-207ENST00000413642 DLGAP5Q15398 846 aa32.82■■■□□ 2.84
VEGFA-207ENST00000413642 CAVIN4Q5BKX8 364 aa32.82■■■□□ 2.84
VEGFA-207ENST00000413642 MFSD14BQ5SR56 506 aa32.82■■■□□ 2.84
VEGFA-207ENST00000413642 COL13A1Q5TAT6 717 aaPredicted RBP32.82■■■□□ 2.84
VEGFA-207ENST00000413642 C2orf69Q8N8R5 385 aa32.82■■■□□ 2.84
VEGFA-207ENST00000413642 AOX1Q06278 1338 aa32.81■■■□□ 2.84
VEGFA-207ENST00000413642 CHAF1AQ13111 956 aaPredicted RBP32.81■■■□□ 2.84
VEGFA-207ENST00000413642 GRIK5Q16478 980 aa32.81■■■□□ 2.84
VEGFA-207ENST00000413642 CFAP100Q494V2 611 aa32.81■■■□□ 2.84
VEGFA-207ENST00000413642 HHIPL1Q96JK4 782 aa32.81■■■□□ 2.84
VEGFA-207ENST00000413642 WBP1LQ9NX94 342 aa32.81■■■□□ 2.84
VEGFA-207ENST00000413642 CIAO1O76071 339 aa32.8■■■□□ 2.84
VEGFA-207ENST00000413642 IFIT1P09914 478 aaKnown RBP32.8■■■□□ 2.84
VEGFA-207ENST00000413642 COPRSQ9NQ92 184 aa32.8■■■□□ 2.84
VEGFA-207ENST00000413642 SRGAP3O43295 1099 aa32.78■■■□□ 2.84
VEGFA-207ENST00000413642 LPIN2Q92539 896 aa32.78■■■□□ 2.84
VEGFA-207ENST00000413642 PRMT6Q96LA8 375 aaPredicted RBP32.78■■■□□ 2.84
VEGFA-207ENST00000413642 CEP126Q9P2H0 1117 aa32.78■■■□□ 2.84
VEGFA-207ENST00000413642 FBXO3Q9UK99 471 aa32.78■■■□□ 2.84
VEGFA-207ENST00000413642 FRAT2O75474 233 aaPredicted RBP32.77■■■□□ 2.84
VEGFA-207ENST00000413642 RLBP1P12271 317 aa32.77■■■□□ 2.84
VEGFA-207ENST00000413642 SLC5A1P13866 664 aa32.77■■■□□ 2.84
VEGFA-207ENST00000413642 MOB2Q70IA6 237 aa32.77■■■□□ 2.84
VEGFA-207ENST00000413642 MTMR14Q8NCE2 650 aa32.77■■■□□ 2.84
VEGFA-207ENST00000413642 ZIC5Q96T25 663 aa32.77■■■□□ 2.84
VEGFA-207ENST00000413642 TTF2Q9UNY4 1162 aaKnown RBP32.77■■■□□ 2.84
VEGFA-207ENST00000413642 GNAI2P04899 355 aa32.76■■■□□ 2.83
VEGFA-207ENST00000413642 IL15P40933 162 aaPredicted RBP32.76■■■□□ 2.83
VEGFA-207ENST00000413642 MTX1Q13505 466 aa32.76■■■□□ 2.83
VEGFA-207ENST00000413642 CLRN2A0PK11 232 aa32.75■■■□□ 2.83
VEGFA-207ENST00000413642 SPDYE2BA6NHP3 402 aa32.75■■■□□ 2.83
VEGFA-207ENST00000413642 SPDYE6P0CI01 402 aa32.75■■■□□ 2.83
VEGFA-207ENST00000413642 RBM5P52756 815 aaKnown RBP eCLIP32.75■■■□□ 2.831e-9■□□□□ 9.1
VEGFA-207ENST00000413642 ATP2B3Q16720 1220 aa32.75■■■□□ 2.83
VEGFA-207ENST00000413642 RGMBQ6NW40 437 aa32.75■■■□□ 2.83
VEGFA-207ENST00000413642 AIDAQ96BJ3 306 aa32.75■■■□□ 2.83
VEGFA-207ENST00000413642 DZIP1LQ8IYY4 767 aaKnown RBP32.74■■■□□ 2.83
VEGFA-207ENST00000413642 MAP2K1Q02750 393 aaPredicted RBP32.73■■■□□ 2.83
VEGFA-207ENST00000413642 APOBEC3FQ8IUX4 373 aaKnown RBP32.73■■■□□ 2.83
VEGFA-207ENST00000413642 PNMA6EA0A0J9YXQ4 647 aa32.72■■■□□ 2.83
VEGFA-207ENST00000413642 MAP2K2P36507 400 aa32.72■■■□□ 2.83
VEGFA-207ENST00000413642 FTSJ3Q8IY81 847 aaKnown RBP32.72■■■□□ 2.83
VEGFA-207ENST00000413642 FAM155AB1AL88 458 aaPredicted RBP32.71■■■□□ 2.83
VEGFA-207ENST00000413642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.71■■■□□ 2.83
VEGFA-207ENST00000413642 PCNTO95613 3336 aa32.71■■■□□ 2.83
VEGFA-207ENST00000413642 UBE2Q2LH0YL09 131 aa32.7■■■□□ 2.83
VEGFA-207ENST00000413642 ADORA1P30542 326 aa32.7■■■□□ 2.83
VEGFA-207ENST00000413642 ZNF157P51786 506 aaPredicted RBP32.7■■■□□ 2.83
VEGFA-207ENST00000413642 C1orf115Q9H7X2 142 aa32.7■■■□□ 2.83
VEGFA-207ENST00000413642 THSD7BQ9C0I4 1608 aa32.69■■■□□ 2.82
VEGFA-207ENST00000413642 TFCP2Q12800 502 aa32.69■■■□□ 2.82
VEGFA-207ENST00000413642 ITPRIPQ8IWB1 547 aa32.69■■■□□ 2.82
VEGFA-207ENST00000413642 DEFB129Q9H1M3 183 aa32.69■■■□□ 2.82
VEGFA-207ENST00000413642 VEZTQ9HBM0 779 aa32.69■■■□□ 2.82
VEGFA-207ENST00000413642 CRKP46108 304 aa32.68■■■□□ 2.82
VEGFA-207ENST00000413642 CTCFP49711 727 aaPredicted RBP32.68■■■□□ 2.82
VEGFA-207ENST00000413642 PRKG1Q13976 671 aa32.68■■■□□ 2.82
VEGFA-207ENST00000413642 TBC1D22AQ8WUA7 517 aa32.68■■■□□ 2.82
VEGFA-207ENST00000413642 SERPINA10Q9UK55 444 aa32.68■■■□□ 2.82
VEGFA-207ENST00000413642 MYO1BO43795 1136 aa32.67■■■□□ 2.82
VEGFA-207ENST00000413642 TIMM10P62072 90 aa32.67■■■□□ 2.82
VEGFA-207ENST00000413642 FKBP1BP68106 108 aa32.67■■■□□ 2.82
VEGFA-207ENST00000413642 TTLL12Q14166 644 aaPredicted RBP32.67■■■□□ 2.82
VEGFA-207ENST00000413642 PANK1Q8TE04 598 aa32.67■■■□□ 2.82
VEGFA-207ENST00000413642 TDRD3Q9H7E2 651 aaKnown RBP32.67■■■□□ 2.82
VEGFA-207ENST00000413642 FZD1Q9UP38 647 aa32.67■■■□□ 2.82
VEGFA-207ENST00000413642 COL1A1P02452 1464 aaPredicted RBP32.67■■■□□ 2.82
VEGFA-207ENST00000413642 ZBTB7BO15156 539 aaPredicted RBP32.66■■■□□ 2.82
VEGFA-207ENST00000413642 HSPA8P11142 646 aaKnown RBP32.66■■■□□ 2.82
VEGFA-207ENST00000413642 PHKA1P46020 1223 aa32.66■■■□□ 2.82
VEGFA-207ENST00000413642 LBX1P52954 281 aa32.66■■■□□ 2.82
VEGFA-207ENST00000413642 NOGQ13253 232 aa32.66■■■□□ 2.82
VEGFA-207ENST00000413642 ZNF70Q9UC06 446 aaPredicted RBP32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms