RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KIAA0825Q8IV33 1275 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 COPRSQ9NQ92 184 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 ZNF646O15015 1829 aaPredicted RBP18.12■□□□□ 0.49
SEC13-208ENST00000397109 FAM205AQ6ZU69 1335 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 PITPNM2Q9BZ72 1349 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 FGFR2P21802 821 aa18.11■□□□□ 0.49
SEC13-208ENST00000397109 IL15P40933 162 aaPredicted RBP18.11■□□□□ 0.49
SEC13-208ENST00000397109 ATG9AQ7Z3C6 839 aa18.11■□□□□ 0.49
SEC13-208ENST00000397109 SIL1Q9H173 461 aa18.11■□□□□ 0.49
SEC13-208ENST00000397109 SRGAP3O43295 1099 aa18.1■□□□□ 0.49
SEC13-208ENST00000397109 SLC5A1P13866 664 aa18.1■□□□□ 0.49
SEC13-208ENST00000397109 ANGEL2Q5VTE6 544 aaKnown RBP18.1■□□□□ 0.49
SEC13-208ENST00000397109 LPIN2Q92539 896 aa18.1■□□□□ 0.49
SEC13-208ENST00000397109 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
SEC13-208ENST00000397109 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
SEC13-208ENST00000397109 WNT10BO00744 389 aa18.09■□□□□ 0.49
SEC13-208ENST00000397109 MS4A1P11836 297 aa18.09■□□□□ 0.49
SEC13-208ENST00000397109 CERS5Q8N5B7 392 aa18.09■□□□□ 0.49
SEC13-208ENST00000397109 ZNF408Q9H9D4 720 aa18.09■□□□□ 0.49
SEC13-208ENST00000397109 FRAT2O75474 233 aaPredicted RBP18.08■□□□□ 0.49
SEC13-208ENST00000397109 VEGFBP49765 207 aa18.08■□□□□ 0.49
SEC13-208ENST00000397109 NBPF9Q3BBW0 867 aa18.08■□□□□ 0.49
SEC13-208ENST00000397109 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.49
SEC13-208ENST00000397109 ASTN2O75129 1339 aaPredicted RBP18.08■□□□□ 0.49
SEC13-208ENST00000397109 ADM5C9JUS6 153 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 ECE1P42892 770 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 DLGAP5Q15398 846 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 MFSD14BQ5SR56 506 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 MTMR14Q8NCE2 650 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 TBC1D22AQ8WUA7 517 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 HHIPL1Q96JK4 782 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
SEC13-208ENST00000397109 BCAMP50895 628 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 ATP2B3Q16720 1220 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 SAPCD2Q86UD0 394 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 C2orf69Q8N8R5 385 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 ZBED3Q96IU2 234 aaPredicted RBP18.07■□□□□ 0.48
SEC13-208ENST00000397109 JAG2Q9Y219 1238 aa18.07■□□□□ 0.48
SEC13-208ENST00000397109 RLBP1P12271 317 aa18.06■□□□□ 0.48
SEC13-208ENST00000397109 WDR33Q9C0J8 1336 aaKnown RBP18.05■□□□□ 0.48
SEC13-208ENST00000397109 F8W031 263 aaPredicted RBP18.05■□□□□ 0.48
SEC13-208ENST00000397109 PAXIP1Q6ZW49 1069 aaPredicted RBP18.05■□□□□ 0.48
SEC13-208ENST00000397109 APOBEC3FQ8IUX4 373 aaKnown RBP18.05■□□□□ 0.48
SEC13-208ENST00000397109 CDCA5Q96FF9 252 aa18.05■□□□□ 0.48
SEC13-208ENST00000397109 GBA2Q9HCG7 927 aaPredicted RBP18.05■□□□□ 0.48
SEC13-208ENST00000397109 IQSEC3Q9UPP2 1182 aaPredicted RBP18.05■□□□□ 0.48
SEC13-208ENST00000397109 ZBTB7BO15156 539 aaPredicted RBP18.04■□□□□ 0.48
SEC13-208ENST00000397109 MYO1BO43795 1136 aa18.04■□□□□ 0.48
SEC13-208ENST00000397109 CHAF1AQ13111 956 aaPredicted RBP18.04■□□□□ 0.48
SEC13-208ENST00000397109 CFAP100Q494V2 611 aa18.04■□□□□ 0.48
SEC13-208ENST00000397109 DLK2Q6UY11 383 aa18.04■□□□□ 0.48
SEC13-208ENST00000397109 CAPNS2Q96L46 248 aa18.04■□□□□ 0.48
SEC13-208ENST00000397109 GNL3LQ9NVN8 582 aaKnown RBP18.04■□□□□ 0.48
SEC13-208ENST00000397109 AKAP2Q9Y2D5 859 aa18.04■□□□□ 0.48
SEC13-208ENST00000397109 PNMA6EA0A0J9YXQ4 647 aa18.03■□□□□ 0.48
SEC13-208ENST00000397109 TTF2Q9UNY4 1162 aaKnown RBP18.03■□□□□ 0.48
SEC13-208ENST00000397109 SUGT1Q9Y2Z0 365 aa18.03■□□□□ 0.48
SEC13-208ENST00000397109 SPDYE2BA6NHP3 402 aa18.02■□□□□ 0.48
SEC13-208ENST00000397109 SPDYE6P0CI01 402 aa18.02■□□□□ 0.48
SEC13-208ENST00000397109 HSPA1AP0DMV8 641 aaKnown RBP18.02■□□□□ 0.48
SEC13-208ENST00000397109 HSPA1BP0DMV9 641 aaKnown RBP18.02■□□□□ 0.48
SEC13-208ENST00000397109 RBM5P52756 815 aaKnown RBP eCLIP18.02■□□□□ 0.48
SEC13-208ENST00000397109 HUNKP57058 714 aa18.02■□□□□ 0.48
SEC13-208ENST00000397109 ATP8B2P98198 1209 aa18.02■□□□□ 0.48
SEC13-208ENST00000397109 G3BP1Q13283 466 aaKnown RBP eCLIP18.02■□□□□ 0.482e-9■■■□□ 17.5
SEC13-208ENST00000397109 CYP4F22Q6NT55 531 aa18.02■□□□□ 0.48
SEC13-208ENST00000397109 WDR66Q8TBY9 1149 aa18.02■□□□□ 0.48
SEC13-208ENST00000397109 SERPINA10Q9UK55 444 aa18.02■□□□□ 0.48
SEC13-208ENST00000397109 FKBP1BP68106 108 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 HDLBPQ00341 1268 aaKnown RBP18.01■□□□□ 0.47
SEC13-208ENST00000397109 PANK1Q8TE04 598 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 SEMA3EO15041 775 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 ZBTB22O15209 634 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 NF2P35240 595 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 TFCP2Q12800 502 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 POLA2Q14181 598 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 SSH3Q8TE77 659 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 MRIQ9BWK5 157 aa18.01■□□□□ 0.47
SEC13-208ENST00000397109 MAST3O60307 1309 aa18■□□□□ 0.47
SEC13-208ENST00000397109 MAP2K2P36507 400 aa18■□□□□ 0.47
SEC13-208ENST00000397109 MAP2K1Q02750 393 aaPredicted RBP18■□□□□ 0.47
SEC13-208ENST00000397109 PRMT6Q96LA8 375 aaPredicted RBP18■□□□□ 0.47
SEC13-208ENST00000397109 ARAP2Q8WZ64 1704 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 A0A1B0GUL7 405 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 CRKP46108 304 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 TIMM10P62072 90 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 GRM1Q13255 1194 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.99■□□□□ 0.47
SEC13-208ENST00000397109 AIDAQ96BJ3 306 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
SEC13-208ENST00000397109 DENND2AQ9ULE3 1009 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 SCAF8Q9UPN6 1271 aaKnown RBP17.99■□□□□ 0.47
SEC13-208ENST00000397109 PPP2R3BQ9Y5P8 575 aa17.99■□□□□ 0.47
SEC13-208ENST00000397109 COL1A1P02452 1464 aaPredicted RBP17.99■□□□□ 0.47
SEC13-208ENST00000397109 PCNTO95613 3336 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 PHKA1P46020 1223 aa17.98■□□□□ 0.47
SEC13-208ENST00000397109 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
SEC13-208ENST00000397109 CCDC102BQ68D86 513 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms