RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 TUBGCP6Q96RT7 1819 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 LOC102724428A0A0B4J2F2 783 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 PLSCR1O15162 318 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 KCNQ3O43525 872 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 PTCD1O75127 700 aaKnown RBP8.03□□□□□ -1.12
NUP58-204ENST00000394327 SOX11P35716 441 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 SIK1P57059 783 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 TWISTNBQ3B726 338 aaPredicted RBP8.03□□□□□ -1.12
NUP58-204ENST00000394327 TMPRSS4Q9NRS4 437 aa8.03□□□□□ -1.12
NUP58-204ENST00000394327 ANKRD36CQ5JPF3 1778 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 NUP98P52948 1817 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 TTC24A2A3L6 582 aaPredicted RBP8.02□□□□□ -1.13
NUP58-204ENST00000394327 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 STARD3NLO95772 234 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 APBA3O96018 575 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 RAB15P59190 212 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 SLC27A3Q5K4L6 730 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 C8orf58Q8NAV2 365 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 CALR3Q96L12 384 aaKnown RBP8.02□□□□□ -1.13
NUP58-204ENST00000394327 ERBB4Q15303 1308 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 C4AP0C0L4 1744 aa8.02□□□□□ -1.13
NUP58-204ENST00000394327 BCORQ6W2J9 1755 aa8.01□□□□□ -1.13
NUP58-204ENST00000394327 ARFGEF2Q9Y6D5 1785 aa8.01□□□□□ -1.13
NUP58-204ENST00000394327 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
NUP58-204ENST00000394327 BAG6P46379 1132 aa8.01□□□□□ -1.13
NUP58-204ENST00000394327 NNTQ13423 1086 aa8.01□□□□□ -1.13
NUP58-204ENST00000394327 ALDH1L2Q3SY69 923 aa8.01□□□□□ -1.13
NUP58-204ENST00000394327 CCDC30Q5VVM6 783 aa8.01□□□□□ -1.13
NUP58-204ENST00000394327 PTF1AQ7RTS3 328 aa8.01□□□□□ -1.13
NUP58-204ENST00000394327 CCNL1Q9UK58 526 aaPredicted RBP8.01□□□□□ -1.13
NUP58-204ENST00000394327 VAMP4O75379 141 aa8□□□□□ -1.13
NUP58-204ENST00000394327 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
NUP58-204ENST00000394327 KRT24Q2M2I5 525 aa8□□□□□ -1.13
NUP58-204ENST00000394327 CCDC82Q8N4S0 544 aa8□□□□□ -1.13
NUP58-204ENST00000394327 TSPYL6Q8N831 410 aa8□□□□□ -1.13
NUP58-204ENST00000394327 STK31Q9BXU1 1019 aa8□□□□□ -1.13
NUP58-204ENST00000394327 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
NUP58-204ENST00000394327 SCN7AQ01118 1682 aa8□□□□□ -1.13
NUP58-204ENST00000394327 PALM3A6NDB9 673 aaPredicted RBP7.99□□□□□ -1.13
NUP58-204ENST00000394327 ELL2O00472 640 aaPredicted RBP7.99□□□□□ -1.13
NUP58-204ENST00000394327 LILRA1O75019 489 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 ADD1P35611 737 aaKnown RBP7.99□□□□□ -1.13
NUP58-204ENST00000394327 SCTRP47872 440 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
NUP58-204ENST00000394327 DNAJC10Q8IXB1 793 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 SLC4A9Q96Q91 983 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 PPP1R12CQ9BZL4 782 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 DBF4Q9UBU7 674 aaPredicted RBP7.99□□□□□ -1.13
NUP58-204ENST00000394327 RCAN3Q9UKA8 241 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 CDV3Q9UKY7 258 aaKnown RBP7.99□□□□□ -1.13
NUP58-204ENST00000394327 KIF16BQ96L93 1317 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 CNTNAP4Q9C0A0 1308 aa7.99□□□□□ -1.13
NUP58-204ENST00000394327 NRG2O14511 850 aaPredicted RBP7.98□□□□□ -1.13
NUP58-204ENST00000394327 CYP19A1P11511 503 aaPredicted RBP7.98□□□□□ -1.13
NUP58-204ENST00000394327 EIF2S2P20042 333 aaKnown RBP7.98□□□□□ -1.13
NUP58-204ENST00000394327 NR5A1Q13285 461 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 TXNRD1Q16881 649 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 RNF135Q8IUD6 432 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 ITPKCQ96DU7 683 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
NUP58-204ENST00000394327 SMC4Q9NTJ3 1288 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 HYPKQ9NX55 129 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
NUP58-204ENST00000394327 PRAMEF22A3QJZ6 481 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 TIMP2P16035 220 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 RARSP54136 660 aaKnown RBP7.97□□□□□ -1.13
NUP58-204ENST00000394327 ITPK1Q13572 414 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
NUP58-204ENST00000394327 CCDC116Q8IYX3 515 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 DEPDC4Q8N2C3 294 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 KDF1Q8NAX2 398 aaPredicted RBP7.97□□□□□ -1.13
NUP58-204ENST00000394327 PLPP7Q8NBV4 271 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 SSH1Q8WYL5 1049 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 CCDC87Q9NVE4 849 aa7.97□□□□□ -1.13
NUP58-204ENST00000394327 MYH3P11055 1940 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 PTPRCP08575 1304 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 FAM187AA6NFU0 413 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 SKIP12755 728 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 IL6STP40189 918 aaPredicted RBP7.96□□□□□ -1.13
NUP58-204ENST00000394327 CRKLP46109 303 aaKnown RBP7.96□□□□□ -1.13
NUP58-204ENST00000394327 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.96□□□□□ -1.13
NUP58-204ENST00000394327 ZNF784Q8NCA9 323 aaPredicted RBP7.96□□□□□ -1.13
NUP58-204ENST00000394327 LINC00116Q8NCU8 138 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 CAMKK2Q96RR4 588 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 CHPF2Q9P2E5 772 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 MAFBQ9Y5Q3 323 aaPredicted RBP7.96□□□□□ -1.13
NUP58-204ENST00000394327 WASF2Q9Y6W5 498 aa7.96□□□□□ -1.13
NUP58-204ENST00000394327 A0A087WZG4 1122 aa7.95□□□□□ -1.14
NUP58-204ENST00000394327 IPO8O15397 1037 aaKnown RBP7.95□□□□□ -1.14
NUP58-204ENST00000394327 ATP9BO43861 1147 aa7.95□□□□□ -1.14
NUP58-204ENST00000394327 DDX58O95786 925 aaKnown RBP7.95□□□□□ -1.14
NUP58-204ENST00000394327 AVPP01185 164 aa7.95□□□□□ -1.14
NUP58-204ENST00000394327 CBLBQ13191 982 aa7.95□□□□□ -1.14
NUP58-204ENST00000394327 EZH2Q15910 746 aaKnown RBP7.95□□□□□ -1.14
NUP58-204ENST00000394327 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
NUP58-204ENST00000394327 INTS5Q6P9B9 1019 aaKnown RBP7.95□□□□□ -1.14
NUP58-204ENST00000394327 LRRC4BQ9NT99 713 aa7.95□□□□□ -1.14
NUP58-204ENST00000394327 ZBTB1Q9Y2K1 713 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms