RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CARMIL3Q8ND23 1372 aa22.49■■□□□ 1.19
CCDC50-202ENST00000392456 GOLIM4O00461 696 aa22.49■■□□□ 1.19
CCDC50-202ENST00000392456 NPHP1O15259 732 aa22.49■■□□□ 1.19
CCDC50-202ENST00000392456 TM4SF1P30408 202 aa22.49■■□□□ 1.19
CCDC50-202ENST00000392456 NMIQ13287 307 aaPredicted RBP22.49■■□□□ 1.19
CCDC50-202ENST00000392456 GORABQ5T7V8 394 aa22.49■■□□□ 1.19
CCDC50-202ENST00000392456 HSCBQ8IWL3 235 aa22.49■■□□□ 1.19
CCDC50-202ENST00000392456 IFIT1P09914 478 aaKnown RBP22.49■■□□□ 1.19
CCDC50-202ENST00000392456 EN1Q05925 392 aaPredicted RBP22.49■■□□□ 1.19
CCDC50-202ENST00000392456 MROH5Q6ZUA9 1318 aa22.49■■□□□ 1.19
CCDC50-202ENST00000392456 A0A0D9SFI3 127 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 CD2BP2O95400 341 aaKnown RBP22.48■■□□□ 1.19
CCDC50-202ENST00000392456 FGFR2P21802 821 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 DDR1Q08345 913 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 KIAA2012Q0VF49 1180 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 RAB3GAP1Q15042 981 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 PRR5LQ6MZQ0 368 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 CALCOCO1Q9P1Z2 691 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 PALD1Q9ULE6 856 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 CIZ1Q9ULV3 898 aaPredicted RBP22.48■■□□□ 1.19
CCDC50-202ENST00000392456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.48■■□□□ 1.19
CCDC50-202ENST00000392456 CHRNDQ07001 517 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 EZH2Q15910 746 aaKnown RBP22.48■■□□□ 1.19
CCDC50-202ENST00000392456 ANKRD7Q92527 254 aa22.48■■□□□ 1.19
CCDC50-202ENST00000392456 KLHL40Q2TBA0 621 aa22.47■■□□□ 1.19
CCDC50-202ENST00000392456 CNBD1Q8NA66 436 aa22.47■■□□□ 1.19
CCDC50-202ENST00000392456 SPEF2Q9C093 1822 aa22.47■■□□□ 1.19
CCDC50-202ENST00000392456 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.19
CCDC50-202ENST00000392456 CCDC158Q5M9N0 1113 aa22.47■■□□□ 1.19
CCDC50-202ENST00000392456 TTC39AQ5SRH9 613 aa22.47■■□□□ 1.19
CCDC50-202ENST00000392456 CDC5LQ99459 802 aaKnown RBP22.47■■□□□ 1.19
CCDC50-202ENST00000392456 LSG1Q9H089 658 aaKnown RBP22.47■■□□□ 1.19
CCDC50-202ENST00000392456 PAG1Q9NWQ8 432 aa22.47■■□□□ 1.19
CCDC50-202ENST00000392456 TNS1Q9HBL0 1735 aaKnown RBP22.46■■□□□ 1.19
CCDC50-202ENST00000392456 SERPINB2P05120 415 aa22.46■■□□□ 1.19
CCDC50-202ENST00000392456 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
CCDC50-202ENST00000392456 RBSNQ9H1K0 784 aa22.46■■□□□ 1.19
CCDC50-202ENST00000392456 CASZ1Q86V15 1759 aa22.46■■□□□ 1.19
CCDC50-202ENST00000392456 TULP1O00294 542 aaPredicted RBP22.46■■□□□ 1.19
CCDC50-202ENST00000392456 PHKA1P46020 1223 aa22.46■■□□□ 1.19
CCDC50-202ENST00000392456 PTH1RQ03431 593 aa22.46■■□□□ 1.19
CCDC50-202ENST00000392456 PUM3Q15397 648 aaKnown RBP22.46■■□□□ 1.19
CCDC50-202ENST00000392456 SEC62Q99442 399 aaKnown RBP22.45■■□□□ 1.18
CCDC50-202ENST00000392456 MCAMP43121 646 aa22.45■■□□□ 1.18
CCDC50-202ENST00000392456 LPIN2Q92539 896 aa22.45■■□□□ 1.18
CCDC50-202ENST00000392456 TNRC6CQ9HCJ0 1690 aaKnown RBP22.44■■□□□ 1.18
CCDC50-202ENST00000392456 ZAP70P43403 619 aa22.44■■□□□ 1.18
CCDC50-202ENST00000392456 CCDC102BQ68D86 513 aa22.44■■□□□ 1.18
CCDC50-202ENST00000392456 ZNF589Q86UQ0 364 aaPredicted RBP22.44■■□□□ 1.18
CCDC50-202ENST00000392456 KBTBD3Q8NAB2 608 aa22.44■■□□□ 1.18
CCDC50-202ENST00000392456 CAMKK2Q96RR4 588 aa22.44■■□□□ 1.18
CCDC50-202ENST00000392456 BSDC1Q9NW68 430 aaPredicted RBP22.44■■□□□ 1.18
CCDC50-202ENST00000392456 MINPP1Q9UNW1 487 aa22.44■■□□□ 1.18
CCDC50-202ENST00000392456 POLRMTO00411 1230 aaKnown RBP22.43■■□□□ 1.18
CCDC50-202ENST00000392456 PRR29P0C7W0 189 aa22.43■■□□□ 1.18
CCDC50-202ENST00000392456 RPS8P62241 208 aaKnown RBP22.43■■□□□ 1.18
CCDC50-202ENST00000392456 FEZ2Q9UHY8 353 aaPredicted RBP22.43■■□□□ 1.18
CCDC50-202ENST00000392456 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
CCDC50-202ENST00000392456 LOC102724159A0A0B4J2E5 919 aa22.42■■□□□ 1.18
CCDC50-202ENST00000392456 PWP2Q15269 919 aaKnown RBP22.42■■□□□ 1.18
CCDC50-202ENST00000392456 SNX21Q969T3 373 aa22.41■■□□□ 1.18
CCDC50-202ENST00000392456 BCAMP50895 628 aa22.41■■□□□ 1.18
CCDC50-202ENST00000392456 CCDC129Q6ZRS4 1044 aa22.41■■□□□ 1.18
CCDC50-202ENST00000392456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.41■■□□□ 1.18
CCDC50-202ENST00000392456 RUFY2Q8WXA3 655 aa22.41■■□□□ 1.18
CCDC50-202ENST00000392456 RAD50Q92878 1312 aa22.41■■□□□ 1.18
CCDC50-202ENST00000392456 TERF2Q15554 542 aa22.4■■□□□ 1.18
CCDC50-202ENST00000392456 DEFB132Q7Z7B7 95 aa22.4■■□□□ 1.18
CCDC50-202ENST00000392456 PTMAP06454 111 aaKnown RBP22.4■■□□□ 1.18
CCDC50-202ENST00000392456 GRIPAP1Q4V328 841 aa22.4■■□□□ 1.18
CCDC50-202ENST00000392456 MSL1Q68DK7 614 aa22.4■■□□□ 1.18
CCDC50-202ENST00000392456 HIP1O00291 1037 aa22.39■■□□□ 1.18
CCDC50-202ENST00000392456 SLC5A1P13866 664 aa22.39■■□□□ 1.17
CCDC50-202ENST00000392456 RASEFQ8IZ41 740 aa22.39■■□□□ 1.17
CCDC50-202ENST00000392456 DDX49Q9Y6V7 483 aaKnown RBP22.39■■□□□ 1.17
CCDC50-202ENST00000392456 PATL2C9JE40 543 aaKnown RBP22.38■■□□□ 1.17
CCDC50-202ENST00000392456 CYP2E1P05181 493 aaPredicted RBP22.38■■□□□ 1.17
CCDC50-202ENST00000392456 HSPA4P34932 840 aa22.38■■□□□ 1.17
CCDC50-202ENST00000392456 MED23Q9ULK4 1368 aa22.38■■□□□ 1.17
CCDC50-202ENST00000392456 KLRK1P26718 216 aa22.38■■□□□ 1.17
CCDC50-202ENST00000392456 AKAP11Q9UKA4 1901 aa22.38■■□□□ 1.17
CCDC50-202ENST00000392456 ARID4AP29374 1257 aaPredicted RBP22.37■■□□□ 1.17
CCDC50-202ENST00000392456 HMG20BQ9P0W2 317 aa22.37■■□□□ 1.17
CCDC50-202ENST00000392456 IQSEC3Q9UPP2 1182 aaPredicted RBP22.37■■□□□ 1.17
CCDC50-202ENST00000392456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.37■■□□□ 1.17
CCDC50-202ENST00000392456 CCDC171Q6TFL3 1326 aa22.37■■□□□ 1.17
CCDC50-202ENST00000392456 RASGRF1Q13972 1273 aa22.36■■□□□ 1.17
CCDC50-202ENST00000392456 ZNF512BQ96KM6 892 aaPredicted RBP22.36■■□□□ 1.17
CCDC50-202ENST00000392456 GYG1P46976 350 aa22.36■■□□□ 1.17
CCDC50-202ENST00000392456 RABEP1Q15276 862 aa22.36■■□□□ 1.17
CCDC50-202ENST00000392456 NLGN1Q8N2Q7 840 aa22.36■■□□□ 1.17
CCDC50-202ENST00000392456 PDGFDQ9GZP0 370 aaPredicted RBP22.36■■□□□ 1.17
CCDC50-202ENST00000392456 ST5P78524 1137 aa22.35■■□□□ 1.17
CCDC50-202ENST00000392456 CRY2Q49AN0 593 aa22.35■■□□□ 1.17
CCDC50-202ENST00000392456 PIBF1Q8WXW3 757 aa22.35■■□□□ 1.17
CCDC50-202ENST00000392456 PIH1D3Q9NQM4 214 aaKnown RBP22.35■■□□□ 1.17
CCDC50-202ENST00000392456 SLC15A2Q16348 729 aa22.35■■□□□ 1.17
CCDC50-202ENST00000392456 ZSCAN23Q3MJ62 389 aa22.35■■□□□ 1.17
CCDC50-202ENST00000392456 CLEC17AQ6ZS10 378 aa22.35■■□□□ 1.17
CCDC50-202ENST00000392456 MMP10P09238 476 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms