RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 CEP126Q9P2H0 1117 aa23.8■■□□□ 1.4
CLN5-201ENST00000377453 LMTK3Q96Q04 1460 aa23.79■■□□□ 1.4
CLN5-201ENST00000377453 PRC1O43663 620 aa23.79■■□□□ 1.4
CLN5-201ENST00000377453 SDF4Q9BRK5 362 aa23.79■■□□□ 1.4
CLN5-201ENST00000377453 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.79■■□□□ 1.4
CLN5-201ENST00000377453 V9GYY5 206 aaPredicted RBP23.79■■□□□ 1.4
CLN5-201ENST00000377453 ANTXR2P58335 489 aa23.79■■□□□ 1.4
CLN5-201ENST00000377453 DPCR1Q3MIW9 517 aa23.79■■□□□ 1.4
CLN5-201ENST00000377453 TOM1L2Q6ZVM7 507 aa23.79■■□□□ 1.4
CLN5-201ENST00000377453 STRCP1A6NGW2 1772 aa23.78■■□□□ 1.4
CLN5-201ENST00000377453 CCDC69A6NI79 296 aa23.78■■□□□ 1.4
CLN5-201ENST00000377453 CTIFO43310 598 aaKnown RBP23.78■■□□□ 1.4
CLN5-201ENST00000377453 FMR1NBQ8N0W7 255 aaPredicted RBP23.78■■□□□ 1.4
CLN5-201ENST00000377453 ZNF274Q96GC6 653 aaPredicted RBP23.78■■□□□ 1.4
CLN5-201ENST00000377453 PRDM4Q9UKN5 801 aa23.78■■□□□ 1.4
CLN5-201ENST00000377453 HPS5Q9UPZ3 1129 aa23.78■■□□□ 1.4
CLN5-201ENST00000377453 MST1RQ04912 1400 aa23.77■■□□□ 1.4
CLN5-201ENST00000377453 SKILP12757 684 aa23.77■■□□□ 1.4
CLN5-201ENST00000377453 ANKRD7Q92527 254 aa23.77■■□□□ 1.4
CLN5-201ENST00000377453 MRPS27Q92552 414 aaKnown RBP23.77■■□□□ 1.4
CLN5-201ENST00000377453 C8orf76Q96K31 380 aa23.77■■□□□ 1.4
CLN5-201ENST00000377453 COL18A1P39060 1754 aa23.77■■□□□ 1.4
CLN5-201ENST00000377453 STK38Q15208 465 aa23.77■■□□□ 1.4
CLN5-201ENST00000377453 SF3A1Q15459 793 aaKnown RBP23.77■■□□□ 1.4
CLN5-201ENST00000377453 ORC3Q9UBD5 711 aaPredicted RBP23.77■■□□□ 1.4
CLN5-201ENST00000377453 CCDC57Q2TAC2 916 aa23.76■■□□□ 1.39
CLN5-201ENST00000377453 ZCRB1Q8TBF4 217 aaKnown RBP23.76■■□□□ 1.39
CLN5-201ENST00000377453 IGSF3O75054 1194 aa23.76■■□□□ 1.39
CLN5-201ENST00000377453 CCDC191Q8NCU4 936 aa23.76■■□□□ 1.39
CLN5-201ENST00000377453 GPR108Q9NPR9 543 aa23.76■■□□□ 1.39
CLN5-201ENST00000377453 KDM4FA0A1W2PPD8 638 aa23.75■■□□□ 1.39
CLN5-201ENST00000377453 MARCKSP29966 332 aaPredicted RBP23.75■■□□□ 1.39
CLN5-201ENST00000377453 PTPN21Q16825 1174 aa23.75■■□□□ 1.39
CLN5-201ENST00000377453 LINC00301Q8NCQ3 95 aa23.75■■□□□ 1.39
CLN5-201ENST00000377453 SENP2Q9HC62 589 aa23.75■■□□□ 1.39
CLN5-201ENST00000377453 ANO10Q9NW15 660 aa23.75■■□□□ 1.39
CLN5-201ENST00000377453 ZHX1Q9UKY1 873 aaPredicted RBP23.75■■□□□ 1.39
CLN5-201ENST00000377453 SARM1Q6SZW1 724 aa23.75■■□□□ 1.39
CLN5-201ENST00000377453 INCENPQ9NQS7 918 aa23.75■■□□□ 1.39
CLN5-201ENST00000377453 UBE2Q2LH0YL09 131 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 CTAGE5O15320 804 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 GPTP24298 496 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 CCZ1BP86790 482 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 CCZ1P86791 482 aaPredicted RBP23.74■■□□□ 1.39
CLN5-201ENST00000377453 TAF7LQ5H9L4 462 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 CCDC158Q5M9N0 1113 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 CEP135Q66GS9 1140 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 NBPF11Q86T75 865 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 CEP57L1Q8IYX8 460 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 MRFAP1L1Q96HT8 127 aa23.74■■□□□ 1.39
CLN5-201ENST00000377453 TJP1Q07157 1748 aa23.73■■□□□ 1.39
CLN5-201ENST00000377453 SMTNL1A8MU46 457 aa23.73■■□□□ 1.39
CLN5-201ENST00000377453 CDC25BP30305 580 aa23.73■■□□□ 1.39
CLN5-201ENST00000377453 IMMTQ16891 758 aaKnown RBP23.73■■□□□ 1.39
CLN5-201ENST00000377453 MB21D2Q8IYB1 491 aaPredicted RBP23.73■■□□□ 1.39
CLN5-201ENST00000377453 RTEL1Q9NZ71 1219 aa23.73■■□□□ 1.39
CLN5-201ENST00000377453 NEDD4P46934 1319 aa23.73■■□□□ 1.39
CLN5-201ENST00000377453 PRDM11Q9NQV5 511 aa23.73■■□□□ 1.39
CLN5-201ENST00000377453 STRN4Q9NRL3 753 aa23.73■■□□□ 1.39
CLN5-201ENST00000377453 GPAA1O43292 621 aa23.72■■□□□ 1.39
CLN5-201ENST00000377453 SMAP1Q8IYB5 467 aaPredicted RBP23.72■■□□□ 1.39
CLN5-201ENST00000377453 CCDC112Q8NEF3 446 aa23.72■■□□□ 1.39
CLN5-201ENST00000377453 NBPF3Q9H094 633 aa23.72■■□□□ 1.39
CLN5-201ENST00000377453 MROH7-TTC4A0A0A0MT08 1334 aa23.72■■□□□ 1.39
CLN5-201ENST00000377453 CPLX1O14810 134 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 SMC2O95347 1197 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 ADALQ6DHV7 355 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 NWD2Q9ULI1 1742 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 KIF1AQ12756 1690 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 MYH15Q9Y2K3 1946 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 ZSCAN20P17040 1043 aaPredicted RBP23.71■■□□□ 1.39
CLN5-201ENST00000377453 MYSM1Q5VVJ2 828 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 FBXO18Q8NFZ0 1043 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 MYL10Q9BUA6 226 aa23.71■■□□□ 1.39
CLN5-201ENST00000377453 SPTLC2O15270 562 aa23.7■■□□□ 1.38
CLN5-201ENST00000377453 CIAO1O76071 339 aa23.7■■□□□ 1.38
CLN5-201ENST00000377453 WDHD1O75717 1129 aaPredicted RBP23.7■■□□□ 1.38
CLN5-201ENST00000377453 MCAMP43121 646 aa23.7■■□□□ 1.38
CLN5-201ENST00000377453 TBC1D10CQ8IV04 446 aa23.7■■□□□ 1.38
CLN5-201ENST00000377453 PHKBQ93100 1093 aa23.7■■□□□ 1.38
CLN5-201ENST00000377453 XPO4Q9C0E2 1151 aaKnown RBP23.7■■□□□ 1.38
CLN5-201ENST00000377453 IFNKQ9P0W0 207 aa23.7■■□□□ 1.38
CLN5-201ENST00000377453 TNS3Q68CZ2 1445 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 CYB5R4Q7L1T6 521 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 RALYLQ86SE5 291 aaKnown RBP23.69■■□□□ 1.38
CLN5-201ENST00000377453 KIAA1468Q9P260 1216 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 SPATA31A3Q5VYP0 1347 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 CAVIN2O95810 425 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 DNAJC10Q8IXB1 793 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 ISCA1Q9BUE6 129 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 PCDH11XQ9BZA7 1347 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 PCDH11YQ9BZA8 1340 aa23.69■■□□□ 1.38
CLN5-201ENST00000377453 ZNF335Q9H4Z2 1342 aaPredicted RBP23.69■■□□□ 1.38
CLN5-201ENST00000377453 ZNF213O14771 459 aa23.68■■□□□ 1.38
CLN5-201ENST00000377453 NPHP1O15259 732 aa23.68■■□□□ 1.38
CLN5-201ENST00000377453 TMC6Q7Z403 805 aa23.68■■□□□ 1.38
CLN5-201ENST00000377453 ZNF202O95125 648 aa23.68■■□□□ 1.38
CLN5-201ENST00000377453 APPP05067 770 aa23.68■■□□□ 1.38
CLN5-201ENST00000377453 TCIRG1Q13488 830 aa23.68■■□□□ 1.38
CLN5-201ENST00000377453 APPBP2Q92624 585 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms