RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
UBE2D3-206ENST00000357194 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 F8W031 263 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 PPP1R12BO60237 982 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 MAP3K11Q16584 847 aa13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 IFNL1Q8IU54 200 aa13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 HELBQ8NG08 1087 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 IRS2Q9Y4H2 1338 aa13.04□□□□□ -0.32
UBE2D3-206ENST00000357194 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 MYO1BO43795 1136 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 IL1R1P14778 569 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 IFIT5Q13325 482 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 CFAP100Q494V2 611 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 C15orf52Q6ZUT6 534 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 CLMNQ96JQ2 1002 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 PRMT6Q96LA8 375 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 TRIM17Q9Y577 477 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 PPP2R3BQ9Y5P8 575 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 SSC5DA1L4H1 1573 aa13.03□□□□□ -0.32
UBE2D3-206ENST00000357194 A0A1B0GUL6 1792 aa13.02□□□□□ -0.32
UBE2D3-206ENST00000357194 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
UBE2D3-206ENST00000357194 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 FOXO4P98177 505 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 SUPT20HL1Q3ZLR7 823 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 CCDC184Q52MB2 194 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 NBPF12Q5TAG4 269 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 ZNF804AQ7Z570 1209 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 VEZTQ9HBM0 779 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 LAMB1P07942 1786 aa13.02□□□□□ -0.33
UBE2D3-206ENST00000357194 UNCXA6NJT0 531 aa13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 IGF2BP3O00425 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 RBM5P52756 815 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 FKBP1AP62942 108 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 OTOP1Q7RTM1 612 aa13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 JAG2Q9Y219 1238 aa13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 IL16Q14005 1332 aa13.01□□□□□ -0.33
UBE2D3-206ENST00000357194 HTTP42858 3142 aa13□□□□□ -0.33
UBE2D3-206ENST00000357194 AOX1Q06278 1338 aa13□□□□□ -0.33
UBE2D3-206ENST00000357194 PLIN1O60240 522 aa13□□□□□ -0.33
UBE2D3-206ENST00000357194 VAMP4O75379 141 aa13□□□□□ -0.33
UBE2D3-206ENST00000357194 USP2O75604 605 aaPredicted RBP13□□□□□ -0.33
UBE2D3-206ENST00000357194 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
UBE2D3-206ENST00000357194 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
UBE2D3-206ENST00000357194 CENPFP49454 3210 aa13□□□□□ -0.33
UBE2D3-206ENST00000357194 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 F6X3S4 739 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 GJA5P36382 358 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 RASA3Q14644 834 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 CCDC57Q2TAC2 916 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 INTS3Q68E01 1043 aaKnown RBP12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 OTUD7BQ6GQQ9 843 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 LDHAL6AQ6ZMR3 332 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 ANKRD13AQ8IZ07 590 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 ERO1AQ96HE7 468 aa12.99□□□□□ -0.33
UBE2D3-206ENST00000357194 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 CRHR2Q13324 411 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 TAF7LQ5H9L4 462 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 CD99L2Q8TCZ2 262 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 PTPN18Q99952 460 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 CNNM1Q9NRU3 951 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 PTPN22Q9Y2R2 807 aa12.98□□□□□ -0.33
UBE2D3-206ENST00000357194 TESPA1A2RU30 521 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-206ENST00000357194 EXOSC9Q06265 439 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-206ENST00000357194 MFSD14BQ5SR56 506 aa12.97□□□□□ -0.33
UBE2D3-206ENST00000357194 GCC1Q96CN9 775 aa12.97□□□□□ -0.33
UBE2D3-206ENST00000357194 TTF2Q9UNY4 1162 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-206ENST00000357194 SALL2Q9Y467 1007 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-206ENST00000357194 MKI67P46013 3256 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-206ENST00000357194 FAM205AQ6ZU69 1335 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 GRM8O00222 908 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 SP3Q02447 781 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 TNFAIP1Q13829 316 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 TDRD7Q8NHU6 1098 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 OPTNQ96CV9 577 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 TDRD3Q9H7E2 651 aaKnown RBP12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 EFCC1Q9HA90 598 aa12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 ZNF70Q9UC06 446 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-206ENST00000357194 OTOFQ9HC10 1997 aa12.96□□□□□ -0.34
UBE2D3-206ENST00000357194 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 GYG1P46976 350 aa12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 UBE4AQ14139 1066 aa12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 WDR63Q8IWG1 891 aa12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 FAM84BQ96KN1 310 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 TEPSINQ96N21 525 aa12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 C9orf78Q9NZ63 289 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 SERPINA10Q9UK55 444 aa12.95□□□□□ -0.34
UBE2D3-206ENST00000357194 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms