RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 SUCLG2Q96I99 432 aa20.15■□□□□ 0.82
PDGFA-201ENST00000354513 ALDH1L1O75891 902 aa20.14■□□□□ 0.81
PDGFA-201ENST00000354513 HDAC9Q9UKV0 1011 aa20.14■□□□□ 0.81
PDGFA-201ENST00000354513 JAG2Q9Y219 1238 aa20.14■□□□□ 0.81
PDGFA-201ENST00000354513 PTPN12Q05209 780 aaKnown RBP20.13■□□□□ 0.81
PDGFA-201ENST00000354513 REM2Q8IYK8 340 aaPredicted RBP20.13■□□□□ 0.81
PDGFA-201ENST00000354513 UTYO14607 1347 aa20.13■□□□□ 0.81
PDGFA-201ENST00000354513 NBPF7P0C2Y1 421 aaPredicted RBP20.12■□□□□ 0.81
PDGFA-201ENST00000354513 FKBP1AP62942 108 aaKnown RBP20.12■□□□□ 0.81
PDGFA-201ENST00000354513 PRKG1Q13976 671 aa20.12■□□□□ 0.81
PDGFA-201ENST00000354513 LDLRAD1Q5T700 205 aa20.12■□□□□ 0.81
PDGFA-201ENST00000354513 LDHAL6AQ6ZMR3 332 aa20.12■□□□□ 0.81
PDGFA-201ENST00000354513 ZNF804AQ7Z570 1209 aa20.12■□□□□ 0.81
PDGFA-201ENST00000354513 PUS3Q9BZE2 481 aaKnown RBP20.12■□□□□ 0.81
PDGFA-201ENST00000354513 TM4SF4P48230 202 aa20.11■□□□□ 0.81
PDGFA-201ENST00000354513 MLLT1Q03111 559 aaPredicted RBP20.11■□□□□ 0.81
PDGFA-201ENST00000354513 MKRN3Q13064 507 aaKnown RBP20.11■□□□□ 0.81
PDGFA-201ENST00000354513 TTLL12Q14166 644 aaPredicted RBP20.11■□□□□ 0.81
PDGFA-201ENST00000354513 CCDC57Q2TAC2 916 aa20.11■□□□□ 0.81
PDGFA-201ENST00000354513 SLC4A10Q6U841 1118 aa20.11■□□□□ 0.81
PDGFA-201ENST00000354513 SRCIN1Q9C0H9 1055 aa20.11■□□□□ 0.81
PDGFA-201ENST00000354513 FAM205AQ6ZU69 1335 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 SPDYE2BA6NHP3 402 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 F8W031 263 aaPredicted RBP20.1■□□□□ 0.81
PDGFA-201ENST00000354513 PLIN1O60240 522 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 SPDYE6P0CI01 402 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 NF2P35240 595 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 DLGAP5Q15398 846 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 CFAP100Q494V2 611 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 MRPL50Q8N5N7 158 aaKnown RBP20.1■□□□□ 0.81
PDGFA-201ENST00000354513 PRMT6Q96LA8 375 aaPredicted RBP20.1■□□□□ 0.81
PDGFA-201ENST00000354513 DEFB129Q9H1M3 183 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 CNNM1Q9NRU3 951 aa20.1■□□□□ 0.81
PDGFA-201ENST00000354513 C9orf78Q9NZ63 289 aaPredicted RBP20.1■□□□□ 0.81
PDGFA-201ENST00000354513 CLRN2A0PK11 232 aa20.09■□□□□ 0.81
PDGFA-201ENST00000354513 TBC1D8O95759 1140 aa20.09■□□□□ 0.81
PDGFA-201ENST00000354513 ANKRD44Q8N8A2 993 aa20.09■□□□□ 0.81
PDGFA-201ENST00000354513 MAP3K11Q16584 847 aa20.08■□□□□ 0.81
PDGFA-201ENST00000354513 RABL6Q3YEC7 729 aaPredicted RBP20.08■□□□□ 0.81
PDGFA-201ENST00000354513 CTU1Q7Z7A3 348 aaKnown RBP20.08■□□□□ 0.81
PDGFA-201ENST00000354513 TDRD7Q8NHU6 1098 aaKnown RBP20.08■□□□□ 0.81
PDGFA-201ENST00000354513 R3HDMLQ9H3Y0 253 aa20.08■□□□□ 0.81
PDGFA-201ENST00000354513 ANGEL1Q9UNK9 670 aaKnown RBP20.08■□□□□ 0.81
PDGFA-201ENST00000354513 RIPOR2Q9Y4F9 1068 aa20.08■□□□□ 0.81
PDGFA-201ENST00000354513 GYG1P46976 350 aa20.07■□□□□ 0.8
PDGFA-201ENST00000354513 TAF7LQ5H9L4 462 aa20.07■□□□□ 0.8
PDGFA-201ENST00000354513 SPRYD7Q5W111 196 aa20.07■□□□□ 0.8
PDGFA-201ENST00000354513 ARMC9Q7Z3E5 817 aa20.07■□□□□ 0.8
PDGFA-201ENST00000354513 ZNF296Q8WUU4 475 aaPredicted RBP20.07■□□□□ 0.8
PDGFA-201ENST00000354513 CLMNQ96JQ2 1002 aa20.07■□□□□ 0.8
PDGFA-201ENST00000354513 FAM84BQ96KN1 310 aaPredicted RBP20.07■□□□□ 0.8
PDGFA-201ENST00000354513 BICC1Q9H694 974 aaKnown RBP20.07■□□□□ 0.8
PDGFA-201ENST00000354513 HTTP42858 3142 aa20.07■□□□□ 0.8
PDGFA-201ENST00000354513 UBE4AQ14139 1066 aa20.06■□□□□ 0.8
PDGFA-201ENST00000354513 GRIK5Q16478 980 aa20.06■□□□□ 0.8
PDGFA-201ENST00000354513 PPP2R3BQ9Y5P8 575 aa20.06■□□□□ 0.8
PDGFA-201ENST00000354513 LRRC24Q50LG9 513 aa20.05■□□□□ 0.8
PDGFA-201ENST00000354513 NBPF12Q5TAG4 269 aaPredicted RBP20.05■□□□□ 0.8
PDGFA-201ENST00000354513 VGLL2Q8N8G2 317 aa20.05■□□□□ 0.8
PDGFA-201ENST00000354513 CFHR5Q9BXR6 569 aa20.05■□□□□ 0.8
PDGFA-201ENST00000354513 RBBP6Q7Z6E9 1792 aaKnown RBP20.04■□□□□ 0.8
PDGFA-201ENST00000354513 SOX10P56693 466 aa20.04■□□□□ 0.8
PDGFA-201ENST00000354513 NOM1Q5C9Z4 860 aaKnown RBP20.04■□□□□ 0.8
PDGFA-201ENST00000354513 CDAN1Q8IWY9 1227 aa20.04■□□□□ 0.8
PDGFA-201ENST00000354513 GPR25O00155 361 aa20.03■□□□□ 0.8
PDGFA-201ENST00000354513 GJA5P36382 358 aa20.03■□□□□ 0.8
PDGFA-201ENST00000354513 SPDYE2Q495Y8 402 aa20.03■□□□□ 0.8
PDGFA-201ENST00000354513 MFSD14BQ5SR56 506 aa20.03■□□□□ 0.8
PDGFA-201ENST00000354513 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
PDGFA-201ENST00000354513 WNK4Q96J92 1243 aa20.03■□□□□ 0.8
PDGFA-201ENST00000354513 VEZTQ9HBM0 779 aa20.03■□□□□ 0.8
PDGFA-201ENST00000354513 HIBADHP31937 336 aaKnown RBP20.02■□□□□ 0.8
PDGFA-201ENST00000354513 SREBF2Q12772 1141 aa20.02■□□□□ 0.8
PDGFA-201ENST00000354513 FBXO33Q7Z6M2 555 aa20.02■□□□□ 0.8
PDGFA-201ENST00000354513 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
PDGFA-201ENST00000354513 PTPRCP08575 1304 aa20.02■□□□□ 0.8
PDGFA-201ENST00000354513 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.8
PDGFA-201ENST00000354513 USP2O75604 605 aaPredicted RBP20.02■□□□□ 0.79
PDGFA-201ENST00000354513 RASA3Q14644 834 aa20.02■□□□□ 0.79
PDGFA-201ENST00000354513 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.79
PDGFA-201ENST00000354513 TEPSINQ96N21 525 aa20.02■□□□□ 0.79
PDGFA-201ENST00000354513 ZNF70Q9UC06 446 aaPredicted RBP20.02■□□□□ 0.79
PDGFA-201ENST00000354513 TTF2Q9UNY4 1162 aaKnown RBP20.02■□□□□ 0.79
PDGFA-201ENST00000354513 ZSWIM8A7E2V4 1837 aa20.01■□□□□ 0.79
PDGFA-201ENST00000354513 IGF2BP3O00425 579 aaKnown RBP eCLIP20.01■□□□□ 0.79
PDGFA-201ENST00000354513 MYO1BO43795 1136 aa20.01■□□□□ 0.79
PDGFA-201ENST00000354513 SLFN5Q08AF3 891 aa20.01■□□□□ 0.79
PDGFA-201ENST00000354513 USP44Q9H0E7 712 aa20.01■□□□□ 0.79
PDGFA-201ENST00000354513 TDRD3Q9H7E2 651 aaKnown RBP20.01■□□□□ 0.79
PDGFA-201ENST00000354513 SERPINA10Q9UK55 444 aa20.01■□□□□ 0.79
PDGFA-201ENST00000354513 IQSEC3Q9UPP2 1182 aaPredicted RBP20.01■□□□□ 0.79
PDGFA-201ENST00000354513 ZBTB48P10074 688 aaPredicted RBP20■□□□□ 0.79
PDGFA-201ENST00000354513 MANSC4A6NHS7 340 aaPredicted RBP19.99■□□□□ 0.79
PDGFA-201ENST00000354513 E9PSI1 815 aa19.99■□□□□ 0.79
PDGFA-201ENST00000354513 RFX5P48382 616 aaPredicted RBP19.99■□□□□ 0.79
PDGFA-201ENST00000354513 RBM5P52756 815 aaKnown RBP eCLIP19.99■□□□□ 0.79
PDGFA-201ENST00000354513 IFNL1Q8IU54 200 aa19.99■□□□□ 0.79
PDGFA-201ENST00000354513 SLC10A4Q96EP9 437 aa19.99■□□□□ 0.79
PDGFA-201ENST00000354513 CDCA7LQ96GN5 454 aa19.99■□□□□ 0.79
PDGFA-201ENST00000354513 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms