RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 STX6O43752 255 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 NLRP3Q96P20 1036 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 MYH15Q9Y2K3 1946 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 ZNF445P59923 1031 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 FKBP4Q02790 459 aaKnown RBP eCLIP12.75□□□□□ -0.37
EPB41-203ENST00000349460 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 COL4A1P02462 1669 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 E7EWF7 191 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 PCP11498 1178 aaKnown RBP12.75□□□□□ -0.37
EPB41-203ENST00000349460 PHKA1P46020 1223 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 RCAN1P53805 252 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
EPB41-203ENST00000349460 GIMAP6Q6P9H5 292 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 TMC4Q7Z404 712 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 FBXO33Q7Z6M2 555 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
EPB41-203ENST00000349460 SEC62Q99442 399 aaKnown RBP12.75□□□□□ -0.37
EPB41-203ENST00000349460 DENND2AQ9ULE3 1009 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 LTBP1Q14766 1721 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 SALL1Q9NSC2 1324 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 KLRG2A4D1S0 409 aaPredicted RBP12.75□□□□□ -0.37
EPB41-203ENST00000349460 GNPATO15228 680 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 PDE6AP16499 860 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 ATL3Q6DD88 541 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 CCDC88AQ3V6T2 1871 aa12.75□□□□□ -0.37
EPB41-203ENST00000349460 GPAA1O43292 621 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 PIH1D3Q9NQM4 214 aaKnown RBP12.74□□□□□ -0.37
EPB41-203ENST00000349460 SEC31BQ9NQW1 1179 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 SYT1P21579 422 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 TM4SF1P30408 202 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 ZNF772Q68DY9 489 aaPredicted RBP12.74□□□□□ -0.37
EPB41-203ENST00000349460 STOX1Q6ZVD7 989 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 MINPP1Q9UNW1 487 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 ELP1O95163 1332 aa12.74□□□□□ -0.37
EPB41-203ENST00000349460 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
EPB41-203ENST00000349460 PLSCR1O15162 318 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 F13A1P00488 732 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 RASGRF1Q13972 1273 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 CRY2Q49AN0 593 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 MB21D2Q8IYB1 491 aaPredicted RBP12.73□□□□□ -0.37
EPB41-203ENST00000349460 STRBPQ96SI9 672 aaKnown RBP12.73□□□□□ -0.37
EPB41-203ENST00000349460 QTRT2Q9H974 415 aaKnown RBP12.73□□□□□ -0.37
EPB41-203ENST00000349460 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
EPB41-203ENST00000349460 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
EPB41-203ENST00000349460 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 ANAPC4Q9UJX5 808 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 MTMR6Q9Y217 621 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 LEMD3Q9Y2U8 911 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 LAMB1P07942 1786 aa12.73□□□□□ -0.37
EPB41-203ENST00000349460 FGAP02671 866 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 GJB2P29033 226 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 PKP1Q13835 747 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 SLC9C2Q5TAH2 1124 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 NBPF5PQ86XG9 351 aaPredicted RBP12.72□□□□□ -0.37
EPB41-203ENST00000349460 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 PUS7LQ9H0K6 701 aaKnown RBP12.72□□□□□ -0.37
EPB41-203ENST00000349460 LARGE1O95461 756 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 MCM5P33992 734 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 NAA16Q6N069 864 aaPredicted RBP12.72□□□□□ -0.37
EPB41-203ENST00000349460 KRT27Q7Z3Y8 459 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 NCOA7Q8NI08 942 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 RFC4P35249 363 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 MRE11P49959 708 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 Q6ZUG5 572 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 TMEM87BQ96K49 555 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 CNNM2Q9H8M5 875 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
EPB41-203ENST00000349460 HOXA10P31260 410 aaPredicted RBP12.71□□□□□ -0.37
EPB41-203ENST00000349460 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.37
EPB41-203ENST00000349460 FLAD1Q8NFF5 587 aa12.71□□□□□ -0.37
EPB41-203ENST00000349460 ZSCAN16Q9H4T2 348 aaPredicted RBP12.71□□□□□ -0.37
EPB41-203ENST00000349460 ZNF213O14771 459 aa12.71□□□□□ -0.38
EPB41-203ENST00000349460 WASHC4Q2M389 1173 aa12.71□□□□□ -0.38
EPB41-203ENST00000349460 CCDC83Q8IWF9 413 aa12.71□□□□□ -0.38
EPB41-203ENST00000349460 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.38
EPB41-203ENST00000349460 TAF6LQ9Y6J9 622 aa12.71□□□□□ -0.38
EPB41-203ENST00000349460 DHX16O60231 1041 aaKnown RBP12.7□□□□□ -0.38
EPB41-203ENST00000349460 GRAPQ13588 217 aa12.7□□□□□ -0.38
EPB41-203ENST00000349460 MCTP1Q6DN14 999 aa12.7□□□□□ -0.38
EPB41-203ENST00000349460 PTF1AQ7RTS3 328 aa12.7□□□□□ -0.38
EPB41-203ENST00000349460 GRAPLQ8TC17 118 aaPredicted RBP12.7□□□□□ -0.38
EPB41-203ENST00000349460 SYAP1Q96A49 352 aaPredicted RBP12.7□□□□□ -0.38
EPB41-203ENST00000349460 GOLGA6L3A6NEY3 463 aa12.7□□□□□ -0.38
EPB41-203ENST00000349460 LETM1O95202 739 aaPredicted RBP12.7□□□□□ -0.38
EPB41-203ENST00000349460 FGRP09769 529 aa12.7□□□□□ -0.38
EPB41-203ENST00000349460 COL1A1P02452 1464 aaPredicted RBP12.69□□□□□ -0.38
EPB41-203ENST00000349460 CPA1P15085 419 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 SGMS1Q86VZ5 419 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 STAG1Q8WVM7 1258 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 BRIP1Q9BX63 1249 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 NACAP1Q9BZK3 213 aa12.69□□□□□ -0.38
EPB41-203ENST00000349460 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
EPB41-203ENST00000349460 LIFRP42702 1097 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms