RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PRIMPOLQ96LW4 560 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 NSFL1CQ9UNZ2 370 aaKnown RBP26.1■■□□□ 1.77
NPAS3-201ENST00000346562 BACH1O14867 736 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 CCDC129Q6ZRS4 1044 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 TXNDC16Q9P2K2 825 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 PARP1P09874 1014 aaKnown RBP26.1■■□□□ 1.77
NPAS3-201ENST00000346562 HCLS1P14317 486 aaPredicted RBP26.1■■□□□ 1.77
NPAS3-201ENST00000346562 UHRF1BP1LA0JNW5 1464 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 SMC6Q96SB8 1091 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 F13A1P00488 732 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 TTC6Q86TZ1 520 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 MRPL50Q8N5N7 158 aaKnown RBP26.1■■□□□ 1.77
NPAS3-201ENST00000346562 FAM200AQ8TCP9 573 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 CFAP57Q96MR6 1250 aa26.1■■□□□ 1.77
NPAS3-201ENST00000346562 ARID5AQ03989 594 aa26.09■■□□□ 1.77
NPAS3-201ENST00000346562 MCM7P33993 719 aa26.09■■□□□ 1.77
NPAS3-201ENST00000346562 PTGS1P23219 599 aa26.09■■□□□ 1.77
NPAS3-201ENST00000346562 ANAPC4Q9UJX5 808 aa26.09■■□□□ 1.77
NPAS3-201ENST00000346562 ODF2LQ9ULJ1 636 aa26.09■■□□□ 1.77
NPAS3-201ENST00000346562 PCDH11XQ9BZA7 1347 aa26.09■■□□□ 1.77
NPAS3-201ENST00000346562 PCDH11YQ9BZA8 1340 aa26.09■■□□□ 1.77
NPAS3-201ENST00000346562 GAS8O95995 478 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 CCDC42Q96M95 316 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 PLCH2O75038 1416 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 SKILP12757 684 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 MAP7D1Q3KQU3 841 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 DTHD1Q6ZMT9 781 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 MIGA1Q8NAN2 632 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 SBNO2Q9Y2G9 1366 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 RPL13P26373 211 aaKnown RBP26.08■■□□□ 1.77
NPAS3-201ENST00000346562 UBXN1Q04323 297 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 USP48Q86UV5 1035 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 DENND2AQ9ULE3 1009 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 ATP6V0A2Q9Y487 856 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 FAM169AQ9Y6X4 670 aa26.08■■□□□ 1.77
NPAS3-201ENST00000346562 CCDC6Q16204 474 aa26.08■■□□□ 1.76
NPAS3-201ENST00000346562 MAK16Q9BXY0 300 aaKnown RBP26.08■■□□□ 1.76
NPAS3-201ENST00000346562 SKAP1Q86WV1 359 aa26.07■■□□□ 1.76
NPAS3-201ENST00000346562 SYT1P21579 422 aa26.07■■□□□ 1.76
NPAS3-201ENST00000346562 HSP90AA4PQ58FG1 418 aa26.07■■□□□ 1.76
NPAS3-201ENST00000346562 LINS1Q8NG48 757 aa26.07■■□□□ 1.76
NPAS3-201ENST00000346562 ASXL1Q8IXJ9 1541 aa26.07■■□□□ 1.76
NPAS3-201ENST00000346562 BRAPQ7Z569 592 aa26.06■■□□□ 1.76
NPAS3-201ENST00000346562 IGHDP01880 384 aa26.06■■□□□ 1.76
NPAS3-201ENST00000346562 BIN2Q9UBW5 565 aaPredicted RBP26.06■■□□□ 1.76
NPAS3-201ENST00000346562 CFAP58Q5T655 872 aa26.06■■□□□ 1.76
NPAS3-201ENST00000346562 ANKS4BQ8N8V4 417 aa26.06■■□□□ 1.76
NPAS3-201ENST00000346562 RNF216Q9NWF9 866 aaPredicted RBP26.06■■□□□ 1.76
NPAS3-201ENST00000346562 TMOD4Q9NZQ9 345 aa26.06■■□□□ 1.76
NPAS3-201ENST00000346562 MAP3K5Q99683 1374 aa26.06■■□□□ 1.76
NPAS3-201ENST00000346562 TCEANC2Q96MN5 208 aa26.06■■□□□ 1.76
NPAS3-201ENST00000346562 SRRTQ9BXP5 876 aaKnown RBP26.06■■□□□ 1.76
NPAS3-201ENST00000346562 FLT4P35916 1363 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 FRMD4BQ9Y2L6 1034 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 JAKMIP2Q96AA8 810 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 TSGA10Q9BZW7 698 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 DNAI1Q9UI46 699 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 RIMS2Q9UQ26 1411 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 RAD50Q92878 1312 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 AKNAD1Q5T1N1 836 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 CCDC65Q8IXS2 484 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 DCAF5Q96JK2 942 aa26.05■■□□□ 1.76
NPAS3-201ENST00000346562 C11orf95C9JLR9 678 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-201ENST00000346562 ATP2C2O75185 946 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 PSMC4P43686 418 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 WDR44Q5JSH3 913 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 PRDM10Q9NQV6 1147 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 PICK1Q9NRD5 415 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 TRAPPC3LQ5T215 181 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.04■■□□□ 1.76
NPAS3-201ENST00000346562 V9GYY5 206 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-201ENST00000346562 ARFGAP3Q9NP61 516 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 WDR70Q9NW82 654 aa26.04■■□□□ 1.76
NPAS3-201ENST00000346562 RPRD2Q5VT52 1461 aaKnown RBP26.03■■□□□ 1.76
NPAS3-201ENST00000346562 SLC8A3P57103 927 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 TUBB4BP68371 445 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 PKNOX2Q96KN3 472 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 SELENOSQ9BQE4 189 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 DACT1Q9NYF0 836 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 MTRF1LQ9UGC7 380 aaKnown RBP26.03■■□□□ 1.76
NPAS3-201ENST00000346562 TFCP2Q12800 502 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 BRDTQ58F21 947 aaPredicted RBP26.03■■□□□ 1.76
NPAS3-201ENST00000346562 KIFAP3Q92845 792 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 ALDH3A1P30838 453 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 PPP1R2P41236 205 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 EIF4A2Q14240 407 aaKnown RBP26.03■■□□□ 1.76
NPAS3-201ENST00000346562 MTUS1Q9ULD2 1270 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 PPP1R7Q15435 360 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 DNAJC25Q9H1X3 360 aa26.03■■□□□ 1.76
NPAS3-201ENST00000346562 SEL1L2Q5TEA6 688 aa26.02■■□□□ 1.76
NPAS3-201ENST00000346562 GOLGA1Q92805 767 aa26.02■■□□□ 1.76
NPAS3-201ENST00000346562 PA2G4Q9UQ80 394 aaKnown RBP26.02■■□□□ 1.76
NPAS3-201ENST00000346562 ZBTB16Q05516 673 aa26.02■■□□□ 1.76
NPAS3-201ENST00000346562 SV2BQ7L1I2 683 aa26.02■■□□□ 1.76
NPAS3-201ENST00000346562 EPB41P11171 864 aaKnown RBP26.02■■□□□ 1.76
NPAS3-201ENST00000346562 MSL1Q68DK7 614 aa26.02■■□□□ 1.76
NPAS3-201ENST00000346562 NFATC2IPQ8NCF5 419 aa26.02■■□□□ 1.76
NPAS3-201ENST00000346562 FNBP1Q96RU3 617 aa26.01■■□□□ 1.75
NPAS3-201ENST00000346562 SP4Q02446 784 aa26.01■■□□□ 1.75
NPAS3-201ENST00000346562 APOBRQ0VD83 1088 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms