RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 ZBTB9Q96C00 473 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 HDAC9Q9UKV0 1011 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 UTP11Q9Y3A2 253 aaKnown RBP15.58■□□□□ 0.08
PDE4D-203ENST00000340635 PTPRGP23470 1445 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 ZBTB21Q9ULJ3 1066 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 SSFA2P28290 1259 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 NAPAP54920 295 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 ANO6Q4KMQ2 910 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 RHOXF2BP0C7M4 288 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 RHOXF2Q9BQY4 288 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 KRT23Q9C075 422 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 MUM1L1Q5H9M0 696 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 CCDC122Q5T0U0 273 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 MIS18AQ9NYP9 233 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 ECM2O94769 699 aaPredicted RBP15.57■□□□□ 0.08
PDE4D-203ENST00000340635 PLCB4Q15147 1175 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 DUSP27Q5VZP5 1158 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 KCNG4Q8TDN1 519 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 BAG1Q99933 345 aaPredicted RBP15.57■□□□□ 0.08
PDE4D-203ENST00000340635 CABP1Q9NZU7 370 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 GIGYF1O75420 1035 aaPredicted RBP15.57■□□□□ 0.08
PDE4D-203ENST00000340635 CUX1P39880 1505 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 HDXQ7Z353 690 aa15.57■□□□□ 0.08
PDE4D-203ENST00000340635 RTEL1-TNFRSF6BF6WH68 1400 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 DCAF17Q5H9S7 520 aaPredicted RBP15.56■□□□□ 0.08
PDE4D-203ENST00000340635 CCDC94Q9BW85 323 aaPredicted RBP15.56■□□□□ 0.08
PDE4D-203ENST00000340635 NOLC1Q14978 699 aaKnown RBP eCLIP15.56■□□□□ 0.08
PDE4D-203ENST00000340635 BCAP29Q9UHQ4 241 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 KRT3P12035 628 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
PDE4D-203ENST00000340635 OGFOD1Q8N543 542 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 NEK1Q96PY6 1258 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 RBM28Q9NW13 759 aaKnown RBP15.56■□□□□ 0.08
PDE4D-203ENST00000340635 RAPGEF1Q13905 1077 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 RBBP5Q15291 538 aaKnown RBP15.56■□□□□ 0.08
PDE4D-203ENST00000340635 RPS6KA2Q15349 733 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 CCDC38Q502W7 563 aa15.56■□□□□ 0.08
PDE4D-203ENST00000340635 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
PDE4D-203ENST00000340635 THEMISQ8N1K5 641 aaPredicted RBP15.55■□□□□ 0.08
PDE4D-203ENST00000340635 HMG20BQ9P0W2 317 aa15.55■□□□□ 0.08
PDE4D-203ENST00000340635 RNF10Q8N5U6 811 aaKnown RBP15.55■□□□□ 0.08
PDE4D-203ENST00000340635 ZGPATQ8N5A5 531 aaKnown RBP15.55■□□□□ 0.08
PDE4D-203ENST00000340635 MYOM3Q5VTT5 1437 aa15.55■□□□□ 0.08
PDE4D-203ENST00000340635 ACTN4O43707 911 aaKnown RBP15.55■□□□□ 0.08
PDE4D-203ENST00000340635 SPOPO43791 374 aa15.55■□□□□ 0.08
PDE4D-203ENST00000340635 RTN1Q16799 776 aa15.55■□□□□ 0.08
PDE4D-203ENST00000340635 ZNF569Q5MCW4 686 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 CASC4Q6P4E1 433 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 ZC3H6P61129 1189 aaKnown RBP15.54■□□□□ 0.08
PDE4D-203ENST00000340635 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 SPECC1L-ADORA2AF8WAN1 911 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 XRCC6P12956 609 aaKnown RBP eCLIP15.54■□□□□ 0.08
PDE4D-203ENST00000340635 GIMAP6Q6P9H5 292 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 LZTFL1Q9NQ48 299 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 NOD1Q9Y239 953 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 ALG1Q9BT22 464 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 RBM27Q9P2N5 1060 aaKnown RBP15.54■□□□□ 0.08
PDE4D-203ENST00000340635 ZBTB43O43298 467 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 PPFIA3O75145 1194 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 GPTP24298 496 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 CLCN1P35523 988 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 GNAQP50148 359 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 SLC12A2P55011 1212 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 ZBTB17Q13105 803 aa15.54■□□□□ 0.08
PDE4D-203ENST00000340635 A6NNZ2 444 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 BACH1O14867 736 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 TUBB8Q3ZCM7 444 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 AMOTQ4VCS5 1084 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 NBPF6Q5VWK0 638 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 TMTC2Q8N394 836 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 NBPF4Q96M43 638 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 BIRC3Q13489 604 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 AOPEPQ8N6M6 819 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 UBL4BQ8N7F7 174 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 KLHL40Q2TBA0 621 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 RILPQ96NA2 401 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 GBP5Q96PP8 586 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 TTLL3Q9Y4R7 772 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 IRX4P78413 519 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 LCA5Q86VQ0 697 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 AFAP1L1Q8TED9 768 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 ATP2A3Q93084 1043 aa15.53■□□□□ 0.08
PDE4D-203ENST00000340635 HCLS1P14317 486 aaPredicted RBP15.52■□□□□ 0.08
PDE4D-203ENST00000340635 RFC4P35249 363 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 SH3BGRP55822 239 aaPredicted RBP15.52■□□□□ 0.08
PDE4D-203ENST00000340635 COG7P83436 770 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 LIN9Q5TKA1 542 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 ZNF365Q70YC5 407 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 KCNH5Q8NCM2 988 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 CNNM2Q9H8M5 875 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 PICALMQ13492 652 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 NFE2L2Q16236 605 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 LGSNQ5TDP6 509 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 HHATQ5VTY9 493 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 KRT79Q5XKE5 535 aa15.52■□□□□ 0.08
PDE4D-203ENST00000340635 MRPL46Q9H2W6 279 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms