RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FBXW7Q969H0 707 aa19.07■□□□□ 0.64
PRKN-201ENST00000338468 FAM84BQ96KN1 310 aaPredicted RBP19.07■□□□□ 0.64
PRKN-201ENST00000338468 GLIS2Q9BZE0 524 aaPredicted RBP19.07■□□□□ 0.64
PRKN-201ENST00000338468 PA2G4Q9UQ80 394 aaKnown RBP19.07■□□□□ 0.64
PRKN-201ENST00000338468 HDAC5Q9UQL6 1122 aa19.07■□□□□ 0.64
PRKN-201ENST00000338468 ASTN2O75129 1339 aaPredicted RBP19.06■□□□□ 0.64
PRKN-201ENST00000338468 FGFR2P21802 821 aa19.06■□□□□ 0.64
PRKN-201ENST00000338468 GYG1P46976 350 aa19.06■□□□□ 0.64
PRKN-201ENST00000338468 RGS19P49795 217 aa19.06■□□□□ 0.64
PRKN-201ENST00000338468 DZIP1LQ8IYY4 767 aaKnown RBP19.06■□□□□ 0.64
PRKN-201ENST00000338468 CERS5Q8N5B7 392 aa19.06■□□□□ 0.64
PRKN-201ENST00000338468 HHIPL1Q96JK4 782 aa19.06■□□□□ 0.64
PRKN-201ENST00000338468 MYO3BQ8WXR4 1341 aa19.05■□□□□ 0.64
PRKN-201ENST00000338468 CIAO1O76071 339 aa19.05■□□□□ 0.64
PRKN-201ENST00000338468 TDRD7Q8NHU6 1098 aaKnown RBP19.05■□□□□ 0.64
PRKN-201ENST00000338468 SIL1Q9H173 461 aa19.05■□□□□ 0.64
PRKN-201ENST00000338468 COPRSQ9NQ92 184 aa19.05■□□□□ 0.64
PRKN-201ENST00000338468 GNAI2P04899 355 aa19.04■□□□□ 0.64
PRKN-201ENST00000338468 HIBADHP31937 336 aaKnown RBP19.04■□□□□ 0.64
PRKN-201ENST00000338468 DLK2Q6UY11 383 aa19.04■□□□□ 0.64
PRKN-201ENST00000338468 FBXO33Q7Z6M2 555 aa19.04■□□□□ 0.64
PRKN-201ENST00000338468 MYOZ2Q9NPC6 264 aa19.04■□□□□ 0.64
PRKN-201ENST00000338468 FBXO3Q9UK99 471 aa19.04■□□□□ 0.64
PRKN-201ENST00000338468 KIAA0825Q8IV33 1275 aa19.03■□□□□ 0.64
PRKN-201ENST00000338468 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
PRKN-201ENST00000338468 JAG2Q9Y219 1238 aa19.03■□□□□ 0.64
PRKN-201ENST00000338468 POLR2AP24928 1970 aaKnown RBP19.02■□□□□ 0.64
PRKN-201ENST00000338468 FAM205AQ6ZU69 1335 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 ZBTB7BO15156 539 aaPredicted RBP19.02■□□□□ 0.64
PRKN-201ENST00000338468 SRGAP3O43295 1099 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 SASH1O94885 1247 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 SCARF1Q14162 830 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 PUM3Q15397 648 aaKnown RBP19.02■□□□□ 0.64
PRKN-201ENST00000338468 CDC37L1Q7L3B6 337 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 USP48Q86UV5 1035 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 PANK1Q8TE04 598 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 MCOLN1Q9GZU1 580 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 ZNF408Q9H9D4 720 aa19.02■□□□□ 0.64
PRKN-201ENST00000338468 PNMA6EA0A0J9YXQ4 647 aa19.01■□□□□ 0.63
PRKN-201ENST00000338468 FKBP1AP62942 108 aaKnown RBP19.01■□□□□ 0.63
PRKN-201ENST00000338468 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
PRKN-201ENST00000338468 GGA3Q9NZ52 723 aa19.01■□□□□ 0.63
PRKN-201ENST00000338468 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
PRKN-201ENST00000338468 ADM5C9JUS6 153 aa19■□□□□ 0.63
PRKN-201ENST00000338468 IL15P40933 162 aaPredicted RBP19■□□□□ 0.63
PRKN-201ENST00000338468 BCAMP50895 628 aa19■□□□□ 0.63
PRKN-201ENST00000338468 NBPF9Q3BBW0 867 aa19■□□□□ 0.63
PRKN-201ENST00000338468 KRT26Q7Z3Y9 468 aa19■□□□□ 0.63
PRKN-201ENST00000338468 LPIN2Q92539 896 aa19■□□□□ 0.63
PRKN-201ENST00000338468 ZBED3Q96IU2 234 aaPredicted RBP19■□□□□ 0.63
PRKN-201ENST00000338468 WNT10BO00744 389 aa18.99■□□□□ 0.63
PRKN-201ENST00000338468 NOGQ13253 232 aa18.99■□□□□ 0.63
PRKN-201ENST00000338468 ANGEL2Q5VTE6 544 aaKnown RBP18.99■□□□□ 0.63
PRKN-201ENST00000338468 OGFOD1Q8N543 542 aa18.99■□□□□ 0.63
PRKN-201ENST00000338468 DCPSQ96C86 337 aaKnown RBP18.99■□□□□ 0.63
PRKN-201ENST00000338468 C1orf115Q9H7X2 142 aa18.99■□□□□ 0.63
PRKN-201ENST00000338468 IQSEC3Q9UPP2 1182 aaPredicted RBP18.99■□□□□ 0.63
PRKN-201ENST00000338468 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.99■□□□□ 0.63
PRKN-201ENST00000338468 IFIT1P09914 478 aaKnown RBP18.98■□□□□ 0.63
PRKN-201ENST00000338468 MMP14P50281 582 aa18.98■□□□□ 0.63
PRKN-201ENST00000338468 DGKZQ13574 1117 aa18.98■□□□□ 0.63
PRKN-201ENST00000338468 CAVIN4Q5BKX8 364 aa18.98■□□□□ 0.63
PRKN-201ENST00000338468 CEP126Q9P2H0 1117 aa18.98■□□□□ 0.63
PRKN-201ENST00000338468 PCDHAC2Q9Y5I4 1007 aa18.98■□□□□ 0.63
PRKN-201ENST00000338468 ARAP2Q8WZ64 1704 aa18.97■□□□□ 0.63
PRKN-201ENST00000338468 SLC5A1P13866 664 aa18.97■□□□□ 0.63
PRKN-201ENST00000338468 POLA2Q14181 598 aa18.97■□□□□ 0.63
PRKN-201ENST00000338468 ATP2B3Q16720 1220 aa18.97■□□□□ 0.63
PRKN-201ENST00000338468 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
PRKN-201ENST00000338468 SCAF8Q9UPN6 1271 aaKnown RBP18.97■□□□□ 0.63
PRKN-201ENST00000338468 CASP8AP2Q9UKL3 1982 aa18.97■□□□□ 0.63
PRKN-201ENST00000338468 PITPNM2Q9BZ72 1349 aa18.97■□□□□ 0.63
PRKN-201ENST00000338468 F8W031 263 aaPredicted RBP18.96■□□□□ 0.63
PRKN-201ENST00000338468 GRIK5Q16478 980 aa18.96■□□□□ 0.63
PRKN-201ENST00000338468 MFSD14BQ5SR56 506 aa18.96■□□□□ 0.63
PRKN-201ENST00000338468 HDAC9Q9UKV0 1011 aa18.96■□□□□ 0.63
PRKN-201ENST00000338468 COL1A1P02452 1464 aaPredicted RBP18.96■□□□□ 0.63
PRKN-201ENST00000338468 HUNKP57058 714 aa18.95■□□□□ 0.62
PRKN-201ENST00000338468 ATP8B2P98198 1209 aa18.95■□□□□ 0.62
PRKN-201ENST00000338468 TFCP2Q12800 502 aa18.95■□□□□ 0.62
PRKN-201ENST00000338468 SULF1Q8IWU6 871 aa18.95■□□□□ 0.62
PRKN-201ENST00000338468 MTMR14Q8NCE2 650 aa18.95■□□□□ 0.62
PRKN-201ENST00000338468 SSH3Q8TE77 659 aa18.95■□□□□ 0.62
PRKN-201ENST00000338468 AOX1Q06278 1338 aa18.95■□□□□ 0.62
PRKN-201ENST00000338468 ADORA1P30542 326 aa18.94■□□□□ 0.62
PRKN-201ENST00000338468 CHAF1AQ13111 956 aaPredicted RBP18.94■□□□□ 0.62
PRKN-201ENST00000338468 MVPQ14764 893 aaKnown RBP18.93■□□□□ 0.62
PRKN-201ENST00000338468 CFAP100Q494V2 611 aa18.93■□□□□ 0.62
PRKN-201ENST00000338468 CDCA5Q96FF9 252 aa18.93■□□□□ 0.62
PRKN-201ENST00000338468 PCDH10Q9P2E7 1040 aa18.93■□□□□ 0.62
PRKN-201ENST00000338468 SPDYE2BA6NHP3 402 aa18.92■□□□□ 0.62
PRKN-201ENST00000338468 SPDYE6P0CI01 402 aa18.92■□□□□ 0.62
PRKN-201ENST00000338468 MS4A1P11836 297 aa18.92■□□□□ 0.62
PRKN-201ENST00000338468 PHKA1P46020 1223 aa18.92■□□□□ 0.62
PRKN-201ENST00000338468 TIMM10P62072 90 aa18.92■□□□□ 0.62
PRKN-201ENST00000338468 DLGAP5Q15398 846 aa18.92■□□□□ 0.62
PRKN-201ENST00000338468 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
PRKN-201ENST00000338468 PRMT6Q96LA8 375 aaPredicted RBP18.92■□□□□ 0.62
PRKN-201ENST00000338468 TTF2Q9UNY4 1162 aaKnown RBP18.92■□□□□ 0.62
PRKN-201ENST00000338468 COG6Q9Y2V7 657 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms