RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FOSBP53539 338 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 NCBP1Q09161 790 aaKnown RBP10.17□□□□□ -0.78
CLK1-201ENST00000321356 ADALQ6DHV7 355 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 TTLL5Q6EMB2 1281 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 RGS22Q8NE09 1264 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 ZNF594Q96JF6 807 aaPredicted RBP10.17□□□□□ -0.78
CLK1-201ENST00000321356 SHANK3Q9BYB0 1731 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 PUS3Q9BZE2 481 aaKnown RBP10.17□□□□□ -0.78
CLK1-201ENST00000321356 KCND1Q9NSA2 647 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 CTNNA3Q9UI47 895 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 PRDM4Q9UKN5 801 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 PCDHA7Q9UN72 937 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 PAXBP1Q9Y5B6 917 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 YEATS4O95619 227 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 ZFYP08048 801 aaPredicted RBP10.17□□□□□ -0.78
CLK1-201ENST00000321356 ATF3P18847 181 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 GUCY1B3Q02153 619 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 LRRFIP1Q32MZ4 808 aaKnown RBP10.17□□□□□ -0.78
CLK1-201ENST00000321356 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 MB21D2Q8IYB1 491 aaPredicted RBP10.17□□□□□ -0.78
CLK1-201ENST00000321356 CEP57L1Q8IYX8 460 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 LINC00301Q8NCQ3 95 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 ARID3AQ99856 593 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 ISCA1Q9BUE6 129 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 POLR3EQ9NVU0 708 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 HPS5Q9UPZ3 1129 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 SPATA31A3Q5VYP0 1347 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 WDR19Q8NEZ3 1342 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 BECN2A8MW95 431 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 A1BGP04217 495 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 CCZ1BP86790 482 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 CCZ1P86791 482 aaPredicted RBP10.16□□□□□ -0.78
CLK1-201ENST00000321356 NKX1-1Q15270 411 aaPredicted RBP10.16□□□□□ -0.78
CLK1-201ENST00000321356 ATP2B3Q16720 1220 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 NYAP1Q6ZVC0 841 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 CHST3Q7LGC8 479 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 FBXO18Q8NFZ0 1043 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 BPIFA3Q9BQP9 254 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 GPHNQ9NQX3 736 aaPredicted RBP10.16□□□□□ -0.78
CLK1-201ENST00000321356 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
CLK1-201ENST00000321356 DHX16O60231 1041 aaKnown RBP10.15□□□□□ -0.78
CLK1-201ENST00000321356 ARID5BQ14865 1188 aa10.15□□□□□ -0.78
CLK1-201ENST00000321356 TPD52L1Q16890 204 aaPredicted RBP10.15□□□□□ -0.78
CLK1-201ENST00000321356 IMMTQ16891 758 aaKnown RBP10.15□□□□□ -0.78
CLK1-201ENST00000321356 BRAPQ7Z569 592 aa10.15□□□□□ -0.78
CLK1-201ENST00000321356 AOPEPQ8N6M6 819 aa10.15□□□□□ -0.78
CLK1-201ENST00000321356 KCNG4Q8TDN1 519 aa10.15□□□□□ -0.78
CLK1-201ENST00000321356 NAT10Q9H0A0 1025 aaKnown RBP10.15□□□□□ -0.78
CLK1-201ENST00000321356 ZBTB3Q9H5J0 574 aa10.15□□□□□ -0.78
CLK1-201ENST00000321356 AKAP11Q9UKA4 1901 aa10.15□□□□□ -0.78
CLK1-201ENST00000321356 A0A087WWV3 80 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 PRC1O43663 620 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 FGAP02671 866 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 SKILP12757 684 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 ZSCAN20P17040 1043 aaPredicted RBP10.15□□□□□ -0.79
CLK1-201ENST00000321356 ADORA1P30542 326 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 NDUFA8P51970 172 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 ANTXR2P58335 489 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 TRIM28Q13263 835 aaKnown RBP10.15□□□□□ -0.79
CLK1-201ENST00000321356 CCDC158Q5M9N0 1113 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 UTP14CQ5TAP6 766 aaKnown RBP10.15□□□□□ -0.79
CLK1-201ENST00000321356 NBPF11Q86T75 865 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 ZCRB1Q8TBF4 217 aaKnown RBP10.15□□□□□ -0.79
CLK1-201ENST00000321356 APPBP2Q92624 585 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 XAGE2Q96GT9 111 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 PLA2G12BQ9BX93 195 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 OSBPL5Q9H0X9 879 aaPredicted RBP10.15□□□□□ -0.79
CLK1-201ENST00000321356 KIAA1468Q9P260 1216 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 NAP1L2Q9ULW6 460 aaPredicted RBP10.15□□□□□ -0.79
CLK1-201ENST00000321356 AKAP2Q9Y2D5 859 aa10.15□□□□□ -0.79
CLK1-201ENST00000321356 ATRNO75882 1429 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 RIC1Q4ADV7 1423 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 WDR17Q8IZU2 1322 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 KLF18A0A0U1RQI7 1052 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 A0A1B0GVL5 298 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 USP27XA6NNY8 438 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 PPFIA3O75145 1194 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 GSDMDP57764 484 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 FKBP4Q02790 459 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLK1-201ENST00000321356 SCARF1Q14162 830 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 TTC39AQ5SRH9 613 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 CEP135Q66GS9 1140 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 CCDC112Q8NEF3 446 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 C8orf76Q96K31 380 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 IMPACTQ9P2X3 320 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 ORC3Q9UBD5 711 aaPredicted RBP10.14□□□□□ -0.79
CLK1-201ENST00000321356 CLIC4Q9Y696 253 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 TOGARAM1Q9Y4F4 1720 aa10.14□□□□□ -0.79
CLK1-201ENST00000321356 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 SPTLC2O15270 562 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 CSF1RP07333 972 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 HAND2P61296 217 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 DMTNQ08495 405 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 STK38Q15208 465 aa10.13□□□□□ -0.79
CLK1-201ENST00000321356 CCDC57Q2TAC2 916 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms