RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 FZD6O60353 706 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 RECKO95980 971 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 EDN3P14138 238 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 MAPK1P28482 360 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 GRNP28799 593 aaKnown RBP6.23□□□□□ -1.41
CD44-202ENST00000278385 DCAF11Q8TEB1 546 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 DMRTB1Q96MA1 342 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 SMG9Q9H0W8 520 aaKnown RBP6.23□□□□□ -1.41
CD44-202ENST00000278385 GGNBP2Q9H3C7 697 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 METTL14Q9HCE5 456 aaKnown RBP6.23□□□□□ -1.41
CD44-202ENST00000278385 DCTN4Q9UJW0 460 aa6.23□□□□□ -1.41
CD44-202ENST00000278385 RUSC2Q8N2Y8 1516 aa6.22□□□□□ -1.41
CD44-202ENST00000278385 DGKGP49619 791 aa6.22□□□□□ -1.41
CD44-202ENST00000278385 SNRPNP63162 240 aaKnown RBP6.22□□□□□ -1.41
CD44-202ENST00000278385 CCDC181Q5TID7 509 aa6.22□□□□□ -1.41
CD44-202ENST00000278385 WFDC8Q8IUA0 241 aa6.22□□□□□ -1.41
CD44-202ENST00000278385 PLD4Q96BZ4 506 aa6.22□□□□□ -1.41
CD44-202ENST00000278385 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
CD44-202ENST00000278385 TMA7Q9Y2S6 64 aaKnown RBP6.22□□□□□ -1.41
CD44-202ENST00000278385 ANKRD33BA6NCL7 494 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 J3QW42 95 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 ALBP02768 609 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 CABP4P57796 275 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 SETQ01105 290 aaPredicted RBP6.21□□□□□ -1.42
CD44-202ENST00000278385 HSP90AB4PQ58FF6 505 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 FAM117BQ6P1L5 589 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 GJD3Q8N144 294 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 TMEM151AQ8N4L1 468 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 PLVAPQ9BX97 442 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 MUC3BQ9H195 1237 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 TMEM63CQ9P1W3 806 aa6.21□□□□□ -1.42
CD44-202ENST00000278385 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.21□□□□□ -1.42
CD44-202ENST00000278385 TLDC2A0PJX2 215 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 A6NHS1 94 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 TNFRSF21O75509 655 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 GDF11O95390 407 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 APBA3O96018 575 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 HOXD8P13378 290 aaPredicted RBP6.2□□□□□ -1.42
CD44-202ENST00000278385 ARHGAP4P98171 946 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 KCNMA1Q12791 1236 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 PERM1Q5SV97 790 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 CEP135Q66GS9 1140 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 GDF6Q6KF10 455 aaPredicted RBP6.2□□□□□ -1.42
CD44-202ENST00000278385 TTC9Q92623 222 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 GPATCH3Q96I76 525 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 NACC1Q96RE7 527 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 LNPKQ9C0E8 428 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
CD44-202ENST00000278385 ZBTB42B2RXF5 422 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 MAFGO15525 162 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 ERCC5P28715 1186 aaPredicted RBP6.19□□□□□ -1.42
CD44-202ENST00000278385 PLCB3Q01970 1234 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 RASSF7Q02833 373 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 EGFLAMQ63HQ2 1017 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 C1orf127Q8N9H9 656 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 KANSL3Q9P2N6 904 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 STARD13Q9Y3M8 1113 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 PRXQ9BXM0 1461 aa6.19□□□□□ -1.42
CD44-202ENST00000278385 EEA1Q15075 1411 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 UACAQ9BZF9 1416 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 ABCC10Q5T3U5 1492 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 CPNE3O75131 537 aaKnown RBP6.18□□□□□ -1.42
CD44-202ENST00000278385 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 PTPRAP18433 802 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 MSL1Q68DK7 614 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 LINC00114Q6XXX2 140 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 DMRTC2Q8IXT2 367 aaPredicted RBP6.18□□□□□ -1.42
CD44-202ENST00000278385 IL22RA1Q8N6P7 574 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 MDFIQ99750 246 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 LPIN3Q9BQK8 851 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 RBCK1Q9BYM8 510 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 BCL11AQ9H165 835 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 CNTN3Q9P232 1028 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 UGGT2Q9NYU1 1516 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 IQGAP2Q13576 1575 aa6.18□□□□□ -1.42
CD44-202ENST00000278385 DISP1Q96F81 1524 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 KIF4AO95239 1232 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 CYP2E1P05181 493 aaPredicted RBP6.17□□□□□ -1.42
CD44-202ENST00000278385 ARL4DP49703 201 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 AFF1P51825 1210 aaKnown RBP6.17□□□□□ -1.42
CD44-202ENST00000278385 IGBP1P78318 339 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 FGD1P98174 961 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 ATP2B2Q01814 1243 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 C20orf204Q6ZNR8 217 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 C8orf86Q6ZUL3 223 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 FBXO33Q7Z6M2 555 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 MAP4K3Q8IVH8 894 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 DTWD1Q8N5C7 304 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 MORC4Q8TE76 937 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 DNAJC2Q99543 621 aaKnown RBP6.17□□□□□ -1.42
CD44-202ENST00000278385 PBX4Q9BYU1 374 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 NIF3L1Q9GZT8 377 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 DNAJC25Q9H1X3 360 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 ZFYVE28Q9HCC9 887 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 NLRP2Q9NX02 1062 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 MAGEC2Q9UBF1 373 aaPredicted RBP6.17□□□□□ -1.42
CD44-202ENST00000278385 FOXD3Q9UJU5 478 aaPredicted RBP6.17□□□□□ -1.42
CD44-202ENST00000278385 NAGPAQ9UK23 515 aa6.17□□□□□ -1.42
CD44-202ENST00000278385 UHRF1BP1LA0JNW5 1464 aa6.16□□□□□ -1.42
CD44-202ENST00000278385 GOLGA3Q08378 1498 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms