RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 VGLL2Q8N8G2 317 aa26.41■■□□□ 1.82
HCFC1R1-201ENST00000248089 SIL1Q9H173 461 aa26.41■■□□□ 1.82
HCFC1R1-201ENST00000248089 SCAF8Q9UPN6 1271 aaKnown RBP26.41■■□□□ 1.82
HCFC1R1-201ENST00000248089 PITPNM2Q9BZ72 1349 aa26.4■■□□□ 1.82
HCFC1R1-201ENST00000248089 EYA2O00167 538 aa26.4■■□□□ 1.82
HCFC1R1-201ENST00000248089 PDE8BO95263 885 aa26.4■■□□□ 1.82
HCFC1R1-201ENST00000248089 ECE1P42892 770 aa26.4■■□□□ 1.82
HCFC1R1-201ENST00000248089 PTPN12Q05209 780 aaKnown RBP26.4■■□□□ 1.82
HCFC1R1-201ENST00000248089 CDCA5Q96FF9 252 aa26.4■■□□□ 1.82
HCFC1R1-201ENST00000248089 FAM84BQ96KN1 310 aaPredicted RBP26.4■■□□□ 1.82
HCFC1R1-201ENST00000248089 WNT10BO00744 389 aa26.39■■□□□ 1.82
HCFC1R1-201ENST00000248089 GNAI3P08754 354 aa26.38■■□□□ 1.81
HCFC1R1-201ENST00000248089 MMP14P50281 582 aa26.38■■□□□ 1.81
HCFC1R1-201ENST00000248089 PUM3Q15397 648 aaKnown RBP26.38■■□□□ 1.81
HCFC1R1-201ENST00000248089 ZKSCAN2Q63HK3 967 aa26.38■■□□□ 1.81
HCFC1R1-201ENST00000248089 TDRD7Q8NHU6 1098 aaKnown RBP26.38■■□□□ 1.81
HCFC1R1-201ENST00000248089 GBA2Q9HCG7 927 aaPredicted RBP26.38■■□□□ 1.81
HCFC1R1-201ENST00000248089 IQSEC3Q9UPP2 1182 aaPredicted RBP26.38■■□□□ 1.81
HCFC1R1-201ENST00000248089 HUNKP57058 714 aa26.37■■□□□ 1.81
HCFC1R1-201ENST00000248089 CAVIN4Q5BKX8 364 aa26.37■■□□□ 1.81
HCFC1R1-201ENST00000248089 AIDAQ96BJ3 306 aa26.37■■□□□ 1.81
HCFC1R1-201ENST00000248089 FRAT2O75474 233 aaPredicted RBP26.36■■□□□ 1.81
HCFC1R1-201ENST00000248089 FKBP1AP62942 108 aaKnown RBP26.36■■□□□ 1.81
HCFC1R1-201ENST00000248089 C2orf69Q8N8R5 385 aa26.36■■□□□ 1.81
HCFC1R1-201ENST00000248089 FAM205AQ6ZU69 1335 aa26.36■■□□□ 1.81
HCFC1R1-201ENST00000248089 IFIT1P09914 478 aaKnown RBP26.35■■□□□ 1.81
HCFC1R1-201ENST00000248089 DLGAP5Q15398 846 aa26.35■■□□□ 1.81
HCFC1R1-201ENST00000248089 MFSD14BQ5SR56 506 aa26.35■■□□□ 1.81
HCFC1R1-201ENST00000248089 ATG9AQ7Z3C6 839 aa26.35■■□□□ 1.81
HCFC1R1-201ENST00000248089 PA2G4Q9UQ80 394 aaKnown RBP26.35■■□□□ 1.81
HCFC1R1-201ENST00000248089 PAPPA2Q9BXP8 1791 aa26.35■■□□□ 1.81
HCFC1R1-201ENST00000248089 AOC2O75106 756 aa26.34■■□□□ 1.81
HCFC1R1-201ENST00000248089 CHAF1AQ13111 956 aaPredicted RBP26.34■■□□□ 1.81
HCFC1R1-201ENST00000248089 FBXO33Q7Z6M2 555 aa26.34■■□□□ 1.81
HCFC1R1-201ENST00000248089 TMEM57Q8N5G2 664 aa26.34■■□□□ 1.81
HCFC1R1-201ENST00000248089 HHIPL1Q96JK4 782 aa26.34■■□□□ 1.81
HCFC1R1-201ENST00000248089 CIAO1O76071 339 aa26.33■■□□□ 1.81
HCFC1R1-201ENST00000248089 SLC5A1P13866 664 aa26.33■■□□□ 1.81
HCFC1R1-201ENST00000248089 FGFR2P21802 821 aa26.33■■□□□ 1.81
HCFC1R1-201ENST00000248089 BCAMP50895 628 aa26.33■■□□□ 1.81
HCFC1R1-201ENST00000248089 FTSJ3Q8IY81 847 aaKnown RBP26.33■■□□□ 1.81
HCFC1R1-201ENST00000248089 PCDHAC2Q9Y5I4 1007 aa26.33■■□□□ 1.81
HCFC1R1-201ENST00000248089 FOXN1O15353 648 aa26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 SRGAP3O43295 1099 aa26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 RBM5P52756 815 aaKnown RBP eCLIP26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 CFAP100Q494V2 611 aa26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 PRAMEF18Q5VWM3 479 aa26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 APOBEC3FQ8IUX4 373 aaKnown RBP26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 ZBED3Q96IU2 234 aaPredicted RBP26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 FBXO3Q9UK99 471 aa26.32■■□□□ 1.8
HCFC1R1-201ENST00000248089 MAP2K1Q02750 393 aaPredicted RBP26.31■■□□□ 1.8
HCFC1R1-201ENST00000248089 LPIN2Q92539 896 aa26.31■■□□□ 1.8
HCFC1R1-201ENST00000248089 WBP1LQ9NX94 342 aa26.31■■□□□ 1.8
HCFC1R1-201ENST00000248089 CEP126Q9P2H0 1117 aa26.31■■□□□ 1.8
HCFC1R1-201ENST00000248089 TTF2Q9UNY4 1162 aaKnown RBP26.31■■□□□ 1.8
HCFC1R1-201ENST00000248089 GNAI2P04899 355 aa26.3■■□□□ 1.8
HCFC1R1-201ENST00000248089 COL13A1Q5TAT6 717 aaPredicted RBP26.3■■□□□ 1.8
HCFC1R1-201ENST00000248089 IL15P40933 162 aaPredicted RBP26.29■■□□□ 1.8
HCFC1R1-201ENST00000248089 ATP2B3Q16720 1220 aa26.29■■□□□ 1.8
HCFC1R1-201ENST00000248089 MTMR14Q8NCE2 650 aa26.29■■□□□ 1.8
HCFC1R1-201ENST00000248089 COPRSQ9NQ92 184 aa26.29■■□□□ 1.8
HCFC1R1-201ENST00000248089 CLRN2A0PK11 232 aa26.28■■□□□ 1.8
HCFC1R1-201ENST00000248089 SPDYE2BA6NHP3 402 aa26.28■■□□□ 1.8
HCFC1R1-201ENST00000248089 MYO1BO43795 1136 aa26.28■■□□□ 1.8
HCFC1R1-201ENST00000248089 SPDYE6P0CI01 402 aa26.28■■□□□ 1.8
HCFC1R1-201ENST00000248089 RGMBQ6NW40 437 aa26.28■■□□□ 1.8
HCFC1R1-201ENST00000248089 ZNF157P51786 506 aaPredicted RBP26.27■■□□□ 1.8
HCFC1R1-201ENST00000248089 MTX1Q13505 466 aa26.27■■□□□ 1.8
HCFC1R1-201ENST00000248089 TTLL12Q14166 644 aaPredicted RBP26.27■■□□□ 1.8
HCFC1R1-201ENST00000248089 ITPRIPQ8IWB1 547 aa26.27■■□□□ 1.8
HCFC1R1-201ENST00000248089 DZIP1LQ8IYY4 767 aaKnown RBP26.27■■□□□ 1.8
HCFC1R1-201ENST00000248089 VEZTQ9HBM0 779 aa26.27■■□□□ 1.8
HCFC1R1-201ENST00000248089 COL1A1P02452 1464 aaPredicted RBP26.26■■□□□ 1.79
HCFC1R1-201ENST00000248089 NF2P35240 595 aa26.26■■□□□ 1.79
HCFC1R1-201ENST00000248089 MAP2K2P36507 400 aa26.26■■□□□ 1.79
HCFC1R1-201ENST00000248089 CTCFP49711 727 aaPredicted RBP26.26■■□□□ 1.79
HCFC1R1-201ENST00000248089 TBC1D22AQ8WUA7 517 aa26.26■■□□□ 1.79
HCFC1R1-201ENST00000248089 PRMT6Q96LA8 375 aaPredicted RBP26.26■■□□□ 1.79
HCFC1R1-201ENST00000248089 BEGAINQ9BUH8 593 aa26.26■■□□□ 1.79
HCFC1R1-201ENST00000248089 AOX1Q06278 1338 aa26.25■■□□□ 1.79
HCFC1R1-201ENST00000248089 GRIK5Q16478 980 aa26.25■■□□□ 1.79
HCFC1R1-201ENST00000248089 MOB2Q70IA6 237 aa26.25■■□□□ 1.79
HCFC1R1-201ENST00000248089 RLBP1P12271 317 aa26.24■■□□□ 1.79
HCFC1R1-201ENST00000248089 FKBP1BP68106 108 aa26.24■■□□□ 1.79
HCFC1R1-201ENST00000248089 NOGQ13253 232 aa26.24■■□□□ 1.79
HCFC1R1-201ENST00000248089 SERPINA10Q9UK55 444 aa26.24■■□□□ 1.79
HCFC1R1-201ENST00000248089 CRKP46108 304 aa26.23■■□□□ 1.79
HCFC1R1-201ENST00000248089 DEFB129Q9H1M3 183 aa26.23■■□□□ 1.79
HCFC1R1-201ENST00000248089 PNMA6EA0A0J9YXQ4 647 aa26.22■■□□□ 1.79
HCFC1R1-201ENST00000248089 PRKG1Q13976 671 aa26.22■■□□□ 1.79
HCFC1R1-201ENST00000248089 CCDC102AQ96A19 550 aa26.22■■□□□ 1.79
HCFC1R1-201ENST00000248089 ZIC5Q96T25 663 aa26.22■■□□□ 1.79
HCFC1R1-201ENST00000248089 C1orf115Q9H7X2 142 aa26.22■■□□□ 1.79
HCFC1R1-201ENST00000248089 FAM155AB1AL88 458 aaPredicted RBP26.21■■□□□ 1.79
HCFC1R1-201ENST00000248089 UBE2Q2LH0YL09 131 aa26.21■■□□□ 1.79
HCFC1R1-201ENST00000248089 LBX1P52954 281 aa26.21■■□□□ 1.79
HCFC1R1-201ENST00000248089 GNL3LQ9NVN8 582 aaKnown RBP26.21■■□□□ 1.79
HCFC1R1-201ENST00000248089 SLC10A3P09131 477 aa26.2■■□□□ 1.78
HCFC1R1-201ENST00000248089 HSPA8P11142 646 aaKnown RBP26.2■■□□□ 1.78
HCFC1R1-201ENST00000248089 ADORA1P30542 326 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms