RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TSHZ3Q63HK5 1081 aa23.22■■□□□ 1.31
HOXC13-201ENST00000243056 GIGYF2Q6Y7W6 1299 aaKnown RBP23.22■■□□□ 1.31
HOXC13-201ENST00000243056 CWC25Q9NXE8 425 aaPredicted RBP23.22■■□□□ 1.31
HOXC13-201ENST00000243056 CCDC172P0C7W6 258 aa23.21■■□□□ 1.31
HOXC13-201ENST00000243056 SSH3Q8TE77 659 aa23.21■■□□□ 1.31
HOXC13-201ENST00000243056 SIL1Q9H173 461 aa23.21■■□□□ 1.31
HOXC13-201ENST00000243056 ZCCHC17Q9NP64 241 aaKnown RBP23.21■■□□□ 1.31
HOXC13-201ENST00000243056 N4BP2Q86UW6 1770 aaPredicted RBP23.21■■□□□ 1.31
HOXC13-201ENST00000243056 CASP7P55210 303 aa23.21■■□□□ 1.31
HOXC13-201ENST00000243056 SBF2Q86WG5 1849 aa23.2■■□□□ 1.31
HOXC13-201ENST00000243056 A0A1B0GUL7 405 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 ARID5BQ14865 1188 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 TRIM5Q9C035 493 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
HOXC13-201ENST00000243056 UTYO14607 1347 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 GNPATO15228 680 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 FBXO18Q8NFZ0 1043 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 ISCA1Q9BUE6 129 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 UBXN6Q9BZV1 441 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 CWC15Q9P013 229 aaKnown RBP23.2■■□□□ 1.3
HOXC13-201ENST00000243056 CHMP3Q9Y3E7 222 aa23.2■■□□□ 1.3
HOXC13-201ENST00000243056 UBN2Q6ZU65 1347 aa23.19■■□□□ 1.3
HOXC13-201ENST00000243056 POLA2Q14181 598 aa23.19■■□□□ 1.3
HOXC13-201ENST00000243056 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.19■■□□□ 1.3
HOXC13-201ENST00000243056 CBX8Q9HC52 389 aa23.19■■□□□ 1.3
HOXC13-201ENST00000243056 SRP68Q9UHB9 627 aaKnown RBP23.19■■□□□ 1.3
HOXC13-201ENST00000243056 AFDNP55196 1824 aaKnown RBP23.19■■□□□ 1.3
HOXC13-201ENST00000243056 ATP2B1P20020 1258 aa23.18■■□□□ 1.3
HOXC13-201ENST00000243056 TTC31Q49AM3 519 aaPredicted RBP23.18■■□□□ 1.3
HOXC13-201ENST00000243056 GOLGA6L1Q8N7Z2 621 aa23.18■■□□□ 1.3
HOXC13-201ENST00000243056 CLIP2Q9UDT6 1046 aa23.18■■□□□ 1.3
HOXC13-201ENST00000243056 NUP188Q5SRE5 1749 aa23.18■■□□□ 1.3
HOXC13-201ENST00000243056 NHSQ6T4R5 1651 aa23.18■■□□□ 1.3
HOXC13-201ENST00000243056 H7C1W4 665 aa23.18■■□□□ 1.3
HOXC13-201ENST00000243056 GOLGA5Q8TBA6 731 aa23.18■■□□□ 1.3
HOXC13-201ENST00000243056 TRMT1Q9NXH9 659 aaKnown RBP23.18■■□□□ 1.3
HOXC13-201ENST00000243056 ZSCAN22P10073 491 aaPredicted RBP23.17■■□□□ 1.3
HOXC13-201ENST00000243056 TYRO3Q06418 890 aa23.17■■□□□ 1.3
HOXC13-201ENST00000243056 LMBR1LQ6UX01 489 aa23.17■■□□□ 1.3
HOXC13-201ENST00000243056 BICDL1Q6ZP65 573 aa23.17■■□□□ 1.3
HOXC13-201ENST00000243056 REXO1L1PQ8IX06 675 aa23.17■■□□□ 1.3
HOXC13-201ENST00000243056 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
HOXC13-201ENST00000243056 OAS2P29728 719 aaKnown RBP23.17■■□□□ 1.3
HOXC13-201ENST00000243056 NLRP10Q86W26 655 aa23.17■■□□□ 1.3
HOXC13-201ENST00000243056 PROM2Q8N271 834 aa23.17■■□□□ 1.3
HOXC13-201ENST00000243056 COL15A1P39059 1388 aa23.16■■□□□ 1.3
HOXC13-201ENST00000243056 ARHGAP29Q52LW3 1261 aa23.16■■□□□ 1.3
HOXC13-201ENST00000243056 LRRC8AQ8IWT6 810 aa23.16■■□□□ 1.3
HOXC13-201ENST00000243056 GPS2Q13227 327 aa23.16■■□□□ 1.3
HOXC13-201ENST00000243056 FOXO4P98177 505 aa23.14■■□□□ 1.3
HOXC13-201ENST00000243056 UPF3BQ9BZI7 483 aaKnown RBP23.14■■□□□ 1.3
HOXC13-201ENST00000243056 L2HGDHQ9H9P8 463 aa23.14■■□□□ 1.3
HOXC13-201ENST00000243056 SEC31AO94979 1220 aaKnown RBP23.14■■□□□ 1.29
HOXC13-201ENST00000243056 ANO6Q4KMQ2 910 aa23.14■■□□□ 1.29
HOXC13-201ENST00000243056 OS9Q13438 667 aaPredicted RBP23.13■■□□□ 1.29
HOXC13-201ENST00000243056 TMCO3Q6UWJ1 677 aa23.13■■□□□ 1.29
HOXC13-201ENST00000243056 ZNF594Q96JF6 807 aaPredicted RBP23.13■■□□□ 1.29
HOXC13-201ENST00000243056 TRMT112Q9UI30 125 aaKnown RBP23.13■■□□□ 1.29
HOXC13-201ENST00000243056 E2F4Q16254 413 aa23.13■■□□□ 1.29
HOXC13-201ENST00000243056 NUTM1Q86Y26 1132 aa23.13■■□□□ 1.29
HOXC13-201ENST00000243056 APBA3O96018 575 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 MTX1Q13505 466 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 CAMK4Q16566 473 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 SUSD4Q5VX71 490 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 CCDC24Q8N4L8 307 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 LRRCC1Q9C099 1032 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 SASH3O75995 380 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 F13A1P00488 732 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 USPL1Q5W0Q7 1092 aa23.12■■□□□ 1.29
HOXC13-201ENST00000243056 CCAR2Q8N163 923 aaKnown RBP23.12■■□□□ 1.29
HOXC13-201ENST00000243056 NIP7Q9Y221 180 aaKnown RBP eCLIP23.12■■□□□ 1.29
HOXC13-201ENST00000243056 MAGEA9P43362 315 aa23.11■■□□□ 1.29
HOXC13-201ENST00000243056 IQUBQ8NA54 791 aa23.11■■□□□ 1.29
HOXC13-201ENST00000243056 CXorf56Q9H5V9 222 aa23.11■■□□□ 1.29
HOXC13-201ENST00000243056 SKILP12757 684 aa23.11■■□□□ 1.29
HOXC13-201ENST00000243056 MAP3K11Q16584 847 aa23.11■■□□□ 1.29
HOXC13-201ENST00000243056 TDRD7Q8NHU6 1098 aaKnown RBP23.11■■□□□ 1.29
HOXC13-201ENST00000243056 ERVV-1B6SEH8 477 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 DNM1Q05193 864 aaKnown RBP23.1■■□□□ 1.29
HOXC13-201ENST00000243056 CCDC93Q567U6 631 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 ZNF34Q8IZ26 560 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 RHPN1Q8TCX5 695 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 ARHGEF1Q92888 912 aaKnown RBP23.1■■□□□ 1.29
HOXC13-201ENST00000243056 DONSONQ9NYP3 566 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 STX6O43752 255 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 CCZ1BP86790 482 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 CCZ1P86791 482 aaPredicted RBP23.1■■□□□ 1.29
HOXC13-201ENST00000243056 SRCAPQ6ZRS2 3230 aa23.1■■□□□ 1.29
HOXC13-201ENST00000243056 COL5A3P25940 1745 aaPredicted RBP23.1■■□□□ 1.29
HOXC13-201ENST00000243056 PATL2C9JE40 543 aaKnown RBP23.09■■□□□ 1.29
HOXC13-201ENST00000243056 SYT1P21579 422 aa23.09■■□□□ 1.29
HOXC13-201ENST00000243056 CKAP2LQ8IYA6 745 aa23.09■■□□□ 1.29
HOXC13-201ENST00000243056 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
HOXC13-201ENST00000243056 NUP98P52948 1817 aa23.09■■□□□ 1.29
HOXC13-201ENST00000243056 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
HOXC13-201ENST00000243056 LMAN1P49257 510 aa23.09■■□□□ 1.29
HOXC13-201ENST00000243056 TRIM28Q13263 835 aaKnown RBP23.09■■□□□ 1.29
HOXC13-201ENST00000243056 TXNRD1Q16881 649 aa23.09■■□□□ 1.29
HOXC13-201ENST00000243056 NOM1Q5C9Z4 860 aaKnown RBP23.09■■□□□ 1.29
HOXC13-201ENST00000243056 ZBTB38Q8NAP3 1195 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms