RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 Vps33aQ9D2N9 598 aa24.81■■□□□ 1.56
Trim9-208ENSMUST00000221370 Dhx8A2A4P0 1244 aaKnown RBP24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Ap5z1Q3U829 807 aa24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Atf3Q60765 181 aa24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Acsbg1Q99PU5 721 aa24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Ankrd1Q9CR42 319 aa24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Cers3Q1A3B0 383 aa24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Ints5Q8CHT3 1018 aa24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Appbp2Q9DAX9 585 aa24.8■■□□□ 1.56
Trim9-208ENSMUST00000221370 Col18a1P39061 1774 aa24.79■■□□□ 1.56
Trim9-208ENSMUST00000221370 TsksO54887 585 aa24.79■■□□□ 1.56
Trim9-208ENSMUST00000221370 Luzp1Q8R4U7 1068 aaKnown RBP24.79■■□□□ 1.56
Trim9-208ENSMUST00000221370 Itga6Q61739 1091 aa24.79■■□□□ 1.56
Trim9-208ENSMUST00000221370 Zpr1Q62384 459 aa24.79■■□□□ 1.56
Trim9-208ENSMUST00000221370 Dhx30Q99PU8 1217 aaKnown RBP24.79■■□□□ 1.56
Trim9-208ENSMUST00000221370 Pramel3A2AHA7 463 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Gm7903A2AWL1 463 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 AV320801A2AWL3 467 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Gm15023L7MUB4 467 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Tpcn2Q8BWC0 731 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Kiaa1524Q8BWY9 907 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Frat1P70339 274 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Ddx17Q501J6 650 aaKnown RBP24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Panx2Q6IMP4 677 aa24.78■■□□□ 1.56
Trim9-208ENSMUST00000221370 Phlpp1Q8CHE4 1687 aa24.77■■□□□ 1.56
Trim9-208ENSMUST00000221370 Hand2Q61039 217 aa24.77■■□□□ 1.56
Trim9-208ENSMUST00000221370 Xpo4Q9ESJ0 1151 aa24.77■■□□□ 1.56
Trim9-208ENSMUST00000221370 Tpm1P58771 284 aa24.76■■□□□ 1.55
Trim9-208ENSMUST00000221370 Mtx1P47802 317 aa24.76■■□□□ 1.55
Trim9-208ENSMUST00000221370 Map10Q8BJS7 891 aa24.76■■□□□ 1.55
Trim9-208ENSMUST00000221370 Hps3Q91VB4 1002 aa24.76■■□□□ 1.55
Trim9-208ENSMUST00000221370 CenpqQ9CPQ5 267 aa24.76■■□□□ 1.55
Trim9-208ENSMUST00000221370 Stxbp4Q9WV89 557 aa24.76■■□□□ 1.55
Trim9-208ENSMUST00000221370 Gm20425E9Q035 978 aaKnown RBP24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 SrprbP47758 269 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Zfp202Q8C879 641 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ttc19Q8CC21 365 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Col3a1P08121 1464 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ercc3P49135 783 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Atp8a2P98200 1148 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Mylk2Q8VCR8 613 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Pcdhb22Q91XZ8 794 aa24.75■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ankib1Q6ZPS6 1085 aa24.74■■□□□ 1.55
Trim9-208ENSMUST00000221370 Fam160b2Q80YR2 744 aa24.74■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ncoa5Q91W39 579 aaKnown RBP24.74■■□□□ 1.55
Trim9-208ENSMUST00000221370 Znf568E9PYI1 671 aa24.74■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ccdc121E9Q6D3 323 aa24.74■■□□□ 1.55
Trim9-208ENSMUST00000221370 Nol10Q5RJG1 687 aaKnown RBP24.74■■□□□ 1.55
Trim9-208ENSMUST00000221370 Fsd2Q8BZ52 692 aa24.74■■□□□ 1.55
Trim9-208ENSMUST00000221370 Jakmip2D3YXK0 820 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Alx1Q8C8B0 326 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ddx41Q91VN6 622 aaKnown RBP24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Odf2lQ9D478 642 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Gm21680A0A0G2JGR8 267 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Znf326O88291 580 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 IbspQ61711 324 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Zfp91Q62511 572 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Fam84aQ9D650 292 aa24.73■■□□□ 1.55
Trim9-208ENSMUST00000221370 Kri1Q8VDQ9 704 aaKnown RBP24.72■■□□□ 1.55
Trim9-208ENSMUST00000221370 Zfp142G5E869 1843 aa24.72■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ess2O70279 479 aa24.72■■□□□ 1.55
Trim9-208ENSMUST00000221370 Ftl2P49945 183 aa24.72■■□□□ 1.55
Trim9-208ENSMUST00000221370 Pfkfb1P70266 471 aa24.72■■□□□ 1.55
Trim9-208ENSMUST00000221370 Filip1Q9CS72 1211 aa24.72■■□□□ 1.55
Trim9-208ENSMUST00000221370 Tubb4aQ9D6F9 444 aa24.72■■□□□ 1.55
Trim9-208ENSMUST00000221370 Gm12185Q5NCB2 835 aa24.71■■□□□ 1.55
Trim9-208ENSMUST00000221370 Il17raQ60943 864 aa24.71■■□□□ 1.55
Trim9-208ENSMUST00000221370 IqcgQ80W32 419 aa24.71■■□□□ 1.55
Trim9-208ENSMUST00000221370 Kcnq5Q9JK45 933 aa24.71■■□□□ 1.55
Trim9-208ENSMUST00000221370 Zkscan5Q9Z1D8 819 aa24.71■■□□□ 1.55
Trim9-208ENSMUST00000221370 Plcb3P51432 1234 aaKnown RBP24.7■■□□□ 1.54
Trim9-208ENSMUST00000221370 Cdc37Q61081 379 aa24.7■■□□□ 1.54
Trim9-208ENSMUST00000221370 Gnl3lQ6PGG6 577 aaKnown RBP24.7■■□□□ 1.54
Trim9-208ENSMUST00000221370 CpdO89001 1377 aa24.7■■□□□ 1.54
Trim9-208ENSMUST00000221370 Prkag3Q8BGM7 489 aa24.69■■□□□ 1.54
Trim9-208ENSMUST00000221370 Cdkl5Q3UTQ8 938 aa24.69■■□□□ 1.54
Trim9-208ENSMUST00000221370 Cnot6lQ8VEG6 555 aa24.69■■□□□ 1.54
Trim9-208ENSMUST00000221370 Acot9Q9R0X4 439 aaKnown RBP24.69■■□□□ 1.54
Trim9-208ENSMUST00000221370 IncenpQ9WU62 880 aa24.69■■□□□ 1.54
Trim9-208ENSMUST00000221370 Cyp3a59D3Z2W7 503 aa24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Clca2Q8BG22 942 aa24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Myh7Q91Z83 1935 aa24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Abcf1Q6P542 837 aaKnown RBP24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Zkscan8Q8BSL0 588 aa24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Dctpp1Q9QY93 170 aa24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Ccne2Q9Z238 404 aa24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Grin2dQ03391 1323 aa24.68■■□□□ 1.54
Trim9-208ENSMUST00000221370 Frmd3Q8BHD4 595 aa24.67■■□□□ 1.54
Trim9-208ENSMUST00000221370 Riok1Q922Q2 567 aa24.67■■□□□ 1.54
Trim9-208ENSMUST00000221370 Ube3bQ9ES34 1070 aa24.67■■□□□ 1.54
Trim9-208ENSMUST00000221370 Sipa1l3G3X9J0 1776 aa24.67■■□□□ 1.54
Trim9-208ENSMUST00000221370 Rec8Q8C5S7 591 aa24.67■■□□□ 1.54
Trim9-208ENSMUST00000221370 Bin1O08539 588 aaKnown RBP24.66■■□□□ 1.54
Trim9-208ENSMUST00000221370 Paxbp1P58501 919 aa24.66■■□□□ 1.54
Trim9-208ENSMUST00000221370 Gpr108Q91WD0 569 aa24.66■■□□□ 1.54
Trim9-208ENSMUST00000221370 Nek3Q9R0A5 511 aa24.66■■□□□ 1.54
Trim9-208ENSMUST00000221370 Metap2O08663 478 aaKnown RBP24.66■■□□□ 1.54
Trim9-208ENSMUST00000221370 Cplx2P84086 134 aa24.66■■□□□ 1.54
Trim9-208ENSMUST00000221370 Dnm3Q8BZ98 863 aa24.66■■□□□ 1.54
Trim9-208ENSMUST00000221370 Crb1Q8VHS2 1405 aa24.66■■□□□ 1.54
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms