RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 Babam1Q3UI43 333 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Igf2bp2Q5SF07 592 aaKnown RBP7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Tbc1d31Q6NXY1 996 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ccdc148Q6P5U8 527 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Cfap69Q8BH53 942 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Usp37Q8C0R0 979 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ccdc12Q8R344 166 aaKnown RBP7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Basp1Q91XV3 226 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ccdc7Q9D541 371 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Erbb3Q61526 1339 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ccdc121E9Q6D3 323 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Spc25Q3UA16 226 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Cracr2aQ3UP38 310 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Micall1Q8BGT6 870 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Hip1rQ9JKY5 1068 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Serpinb6bO08804 377 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Tbc1d2bQ3U0J8 965 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Smarcc2Q6PDG5 1213 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Sec62Q8BU14 398 aaKnown RBP7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Arhgef6Q8K4I3 771 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Slc26a8Q8R0C3 999 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Riok3Q9DBU3 519 aaKnown RBP7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Efcc1Q9JJF6 558 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Cep170bQ80U49 1574 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Irgm2A0A140LIF8 407 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Atf5O70191 283 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Rbm26Q6NZN0 1012 aaKnown RBP7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ppfia2Q8BSS9 1257 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Mtmr3Q8K296 1196 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Synpo2Q91YE8 1087 aaKnown RBP7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Pdzd9Q9D9M4 266 aa7.29□□□□□ -1.24
Ube4a-201ENSMUST00000117506 PplQ9R269 1755 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 PrphP15331 475 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Kif5aP33175 1027 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Mum1l1Q4VA55 681 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Cnga2Q62398 664 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ccdc57Q6PHN1 1016 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Bicd1Q8BR07 835 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ccdc178Q8CDV0 866 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Brf1Q8CFK2 676 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ankrd49Q8VE42 238 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Hmg20bQ9Z104 317 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Eif4a1P60843 406 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Krt15Q61414 452 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Q8R1Y2 203 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Rbm5Q91YE7 815 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Fam213aQ9CYH2 218 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 HnrnpcQ9Z204 313 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Gm28510A0A087WP28 240 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Prim1P20664 417 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ddb1Q3U1J4 1140 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Znf653Q6YND2 615 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Hook2Q7TMK6 716 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Cplx4Q80WM3 160 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Haus1Q8BHX1 278 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Cep55Q8BT07 462 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Prpf31Q8CCF0 499 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Zkscan7E9PVW1 718 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Eftud2O08810 971 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Serpinc1P32261 465 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Strn4P58404 760 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Slc7a3P70423 618 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Ccnl1Q52KE7 532 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Arhgef1Q61210 920 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Spats2Q8K1N4 545 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Krt23Q99PS0 422 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Pkd2l2Q9JLG4 621 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Alpk3Q924C5 1678 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Limch1Q3UH68 1057 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Naa25Q8BWZ3 972 aa7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Prpf40aQ9R1C7 953 aaKnown RBP7.28□□□□□ -1.24
Ube4a-201ENSMUST00000117506 Gbp6A0A0G2JDV3 611 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Gm43302L7N1X8 611 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 SympkQ80X82 1284 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Fam177a1Q8BR63 207 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Clasp2Q8BRT1 1286 aaKnown RBP7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Ttc5Q99LG4 440 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Ebag9Q9D0V7 213 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Plekho1Q9JIY0 408 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Znf394Q9Z1D9 521 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Zap70P43404 618 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Swap70Q6A028 585 aaKnown RBP7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 JmyQ9QXM1 983 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 InhbeO08717 350 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 GmnnO88513 206 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Adcy5P84309 1262 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Tbc1d9Q3UYK3 1264 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Gimap8Q75N62 688 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Trim17Q7TPM3 477 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Sdad1Q80UZ2 687 aaKnown RBP7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Gng11P61953 73 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Tsga10Q6NY15 697 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Slf2Q6P9P0 1278 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Mrps27Q8BK72 415 aaKnown RBP7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Gbp5Q8CFB4 590 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Apbb1ipQ8R5A3 670 aa7.27□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Ube3aO08759 870 aa7.26□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Ier5O89113 308 aa7.26□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Sdc2P43407 202 aa7.26□□□□□ -1.25
Ube4a-201ENSMUST00000117506 Cfap157Q0VFX2 523 aa7.26□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms