RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Washc4Q3UMB9 1173 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 WaslQ91YD9 501 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Chmp4cQ9D7F7 232 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Slx4ipQ9D7Y9 413 aa27.25■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Tuft1O08970 390 aa27.24■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Rfx1P48377 963 aa27.24■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Pdzrn3Q69ZS0 1063 aa27.23■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Pcdhb9E9Q5G2 828 aa27.23■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Prl7a2O54831 253 aa27.23■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Sgsm2Q80U12 1005 aa27.23■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Tbc1d7Q9D0K0 293 aa27.23■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Cyp2ab1S4R196 498 aa27.23■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Arfgef1G3X9K3 1846 aaKnown RBP27.22■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Kcnb2A6H8H5 907 aa27.22■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Lmnb1P14733 588 aaKnown RBP27.22■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Ercc3P49135 783 aa27.22■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Cdca7lQ922M5 438 aa27.22■■□□□ 1.95
Upf3a-201ENSMUST00000043767 MthfsQ9D110 203 aa27.22■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Rbbp6P97868 1790 aaKnown RBP27.21■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Usp44Q8C2S0 711 aa27.21■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Gjb2Q00977 226 aa27.21■■□□□ 1.95
Upf3a-201ENSMUST00000043767 EgfrQ01279 1210 aa27.21■■□□□ 1.95
Upf3a-201ENSMUST00000043767 NsmfQ99NF2 532 aa27.21■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Plcb2A3KGF7 1181 aa27.2■■□□□ 1.95
Upf3a-201ENSMUST00000043767 EvcP57680 1005 aa27.2■■□□□ 1.95
Upf3a-201ENSMUST00000043767 AnlnQ8K298 1121 aaKnown RBP27.2■■□□□ 1.95
Upf3a-201ENSMUST00000043767 Mast3Q3U214 1321 aa27.19■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Atp6v1aP50516 617 aaKnown RBP27.19■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Csrnp1P59054 583 aa27.19■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Zfp831A2ADM8 1628 aa27.19■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Rnf20Q5DTM8 973 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Cyp24a1Q64441 514 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Krt40Q6IFX3 439 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Rassf8Q8CJ96 419 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Atf7Q8R0S1 413 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 F2rP30558 430 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Slc44a4Q91VA1 707 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Mtfr1lQ9CWE0 289 aa27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 RarsQ9D0I9 660 aaKnown RBP27.18■■□□□ 1.94
Upf3a-201ENSMUST00000043767 SfswapQ3USH5 945 aaKnown RBP27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Atp2b4Q6Q477 1205 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Spg7Q3ULF4 781 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Cyp2c67Q569X9 491 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Pdzph1Q8BGR1 1238 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Tti2Q8BGV4 512 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Sp8Q8BMJ8 486 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Tmem67Q8BR76 992 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Skor1Q8BX46 964 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Shisa4Q8CA71 197 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Tceanc2Q8R2M0 207 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Ciapin1Q8WTY4 309 aa27.17■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Olfm5Q8BU90 496 aa27.16■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Hmg20bQ9Z104 317 aa27.16■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Frmpd3A0A140LIW3 1774 aa27.16■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Sik3Q6P4S6 1311 aa27.16■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Frmd7A2AD83 703 aa27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Csf1rP09581 977 aa27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Il4rP16382 810 aa27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Hand2Q61039 217 aa27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Myoz2Q9JJW5 264 aa27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Utp18Q5SSI6 552 aaKnown RBP27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Insm1Q63ZV0 521 aa27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Cfap69Q8BH53 942 aa27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 Rrp9Q91WM3 475 aaKnown RBP27.15■■□□□ 1.94
Upf3a-201ENSMUST00000043767 VirmaA2AIV2 1811 aaKnown RBP27.13■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Cfap70D3YVL2 1141 aa27.13■■□□□ 1.93
Upf3a-201ENSMUST00000043767 PsdQ5DTT2 1024 aa27.13■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Ces1dQ8VCT4 565 aa27.13■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Pold4Q9CWP8 107 aa27.13■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Cdcp1Q5U462 833 aa27.12■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Alx1Q8C8B0 326 aa27.12■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Adam1bQ8R534 806 aa27.12■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Dynll1P63168 89 aa27.12■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Pkp1P97350 728 aaKnown RBP27.12■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Znrd1-asQ8R0E5 213 aa27.12■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Uba5Q8VE47 403 aa27.12■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Itgb4A2A863 1818 aa27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Spty2d1Q68FG3 682 aa27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Trmt44Q9D2Q2 713 aa27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Dmrtc1Q9D9R7 182 aa27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Q9D9S1 216 aa27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Cxcl11Q9JHH5 100 aa27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Ptf1aQ9QX98 324 aa27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Usp42B2RQC2 1324 aaKnown RBP27.11■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Irgm2A0A140LIF8 407 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Vwa3bJ9JI28 736 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 CrcpO35427 148 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Ints3Q7TPD0 1041 aaKnown RBP27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Gpr101Q80T62 511 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Ccdc7Q9D541 371 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Gm3893E9Q1I1 302 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Hap1O35668 628 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Terf1P70371 421 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Ppm1fQ8CGA0 452 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Rufy3Q9D394 469 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Myh13B1AR69 1938 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Nrxn2E9Q7X7 1710 aa27.1■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Carmil3Q3UFQ8 1375 aa27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Btaf1E9QAE3 1848 aa27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Acap3Q6NXL5 833 aa27.09■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms