RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Sptlc3Q8BG54 563 aa28.99■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Fsd2Q8BZ52 692 aa28.99■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Terf2ipQ91VL8 393 aa28.99■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Ercc3P49135 783 aa28.98■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Plekhf1Q3TB82 279 aa28.98■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 U2af1l4Q8BGJ9 220 aa28.98■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Gpatch3Q8BIY1 525 aa28.98■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Cdc45Q9Z1X9 566 aa28.98■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Aox4Q3TYQ9 1336 aa28.98■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Ubn2Q80WC1 1314 aa28.98■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Hook1Q8BIL5 728 aa28.97■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Prr5lA2AVJ5 370 aa28.97■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Rrp1P56183 494 aaKnown RBP28.97■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Tpcn2Q8BWC0 731 aa28.97■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Telo2Q9DC40 840 aaKnown RBP28.97■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Myh1Q5SX40 1942 aa28.97■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Nucb2P81117 420 aa28.96■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Cnot6lQ8VEG6 555 aa28.96■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Alg3Q8K2A8 438 aa28.96■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Emilin1Q99K41 1017 aa28.96■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Tulp1Q9Z273 543 aa28.96■■■□□ 2.23
Cldnd1-201ENSMUST00000023426 Kansl3A2RSY1 903 aaKnown RBP28.95■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Cyp3a59D3Z2W7 503 aa28.95■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Snrpa1P57784 255 aaKnown RBP28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Kiaa0753Q6A000 959 aa28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Gimap5Q8BWF2 308 aa28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ccer1Q9CQL2 403 aa28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Snw1Q9CSN1 536 aaKnown RBP28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Cyp2d9P11714 504 aa28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 TrhQ62361 256 aa28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ttc14Q9CSP9 761 aa28.94■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Lrp5Q91VN0 1614 aa28.93■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Gm4340L7N2C4 268 aa28.93■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Bach1P97302 739 aa28.93■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ankrd23Q812A3 306 aa28.93■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Speer4dL7N216 212 aa28.93■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Mast3Q3U214 1321 aa28.93■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Gm20425E9Q035 978 aaKnown RBP28.92■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Pdia4P08003 638 aaKnown RBP28.92■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 SrprbP47758 269 aa28.92■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Esco1Q69Z69 843 aa28.92■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Gpr108Q91WD0 569 aa28.92■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Trim34aQ99PP6 485 aa28.92■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ybx3Q9JKB3 361 aaKnown RBP28.92■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Tcof1O08784 1320 aaKnown RBP28.91■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Zbtb43Q9DAI4 467 aa28.91■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ripk4Q9ERK0 786 aa28.91■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ankrd31A0A140LI88 1765 aa28.91■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Stx1aO35526 288 aa28.91■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ppfia3P60469 1194 aa28.91■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 SdsQ8VBT2 327 aa28.91■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ccng2O08918 344 aa28.9■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Casp12O08736 419 aa28.9■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Kcnf1Q7TSH7 493 aa28.9■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 CrebrfQ8CDG5 640 aaKnown RBP28.9■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Yeats4Q9CR11 227 aaKnown RBP28.9■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Krt84Q99M73 603 aa28.89■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Ccdc47Q9D024 483 aaKnown RBP28.89■■■□□ 2.22
Cldnd1-201ENSMUST00000023426 Gm28047Q3US59 414 aa28.88■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Cdkl5Q3UTQ8 938 aa28.88■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Slf2Q6P9P0 1278 aa28.88■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 4931408C20RikE9PWP9 1381 aa28.88■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Cavin1O54724 392 aa28.87■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Susd4Q8BH32 490 aa28.87■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Mroh6V9GX81 722 aa28.87■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Med23Q80YQ2 1367 aa28.87■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Wdr78E9PYY5 807 aa28.87■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Pcdhb15Q91Y04 786 aa28.87■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Rcan1Q9JHG6 198 aa28.87■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Atp1a3Q6PIC6 1013 aa28.86■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Stk38Q91VJ4 465 aa28.86■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Tbc1d8Q9Z1A9 1134 aa28.86■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Gm973E9Q295 1059 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Cplx2P84086 134 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Tex2Q6ZPJ0 1128 aaKnown RBP28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Tsen34Q8BMZ5 316 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Kcnq3Q8K3F6 873 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Tbc1d7Q9D0K0 293 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Lipo1J3QME6 396 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Ncbp1Q3UYV9 790 aaKnown RBP28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Pm20d1Q8C165 503 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Dusp10Q9ESS0 483 aa28.85■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Metap2O08663 478 aaKnown RBP28.84■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Cyp26a1O55127 497 aa28.84■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Vps33bP59016 617 aa28.84■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Pla2g4fQ50L41 855 aa28.84■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 VmacQ8BP01 174 aa28.84■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Clic4Q9QYB1 253 aa28.84■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Cfap44E9Q5M6 1843 aa28.84■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Sptlc2P97363 560 aaKnown RBP28.83■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Bola3Q8CEI1 110 aa28.83■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 Inpp5bQ8K337 993 aa28.83■■■□□ 2.21
Cldnd1-201ENSMUST00000023426 CpdO89001 1377 aa28.83■■■□□ 2.2
Cldnd1-201ENSMUST00000023426 Me1P06801 572 aa28.82■■■□□ 2.2
Cldnd1-201ENSMUST00000023426 Pde6aP27664 859 aa28.82■■■□□ 2.2
Cldnd1-201ENSMUST00000023426 Sept12Q9D451 317 aa28.82■■■□□ 2.2
Cldnd1-201ENSMUST00000023426 Acap3Q6NXL5 833 aa28.82■■■□□ 2.2
Cldnd1-201ENSMUST00000023426 Rps6ka5Q8C050 863 aa28.82■■■□□ 2.2
Cldnd1-201ENSMUST00000023426 Hnrnpul1Q8VDM6 859 aaKnown RBP28.82■■■□□ 2.2
Cldnd1-201ENSMUST00000023426 Kat6bQ8BRB7 1872 aa28.81■■■□□ 2.2
Retrieved 100 of 22,080 RNA–protein pairs in 68.1 ms