RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Senp5Q6NXL6 749 aa21.06■□□□□ 0.96
Trim54-201ENSMUST00000013771 Ufl1Q8CCJ3 793 aaKnown RBP21.06■□□□□ 0.96
Trim54-201ENSMUST00000013771 RragcQ99K70 398 aa21.06■□□□□ 0.96
Trim54-201ENSMUST00000013771 Nfe2l3Q9WTM4 660 aa21.06■□□□□ 0.96
Trim54-201ENSMUST00000013771 Myh4Q5SX39 1939 aa21.06■□□□□ 0.96
Trim54-201ENSMUST00000013771 1700123L14RikQ3V2K7 440 aa21.05■□□□□ 0.96
Trim54-201ENSMUST00000013771 Tmprss11eQ5S248 423 aa21.05■□□□□ 0.96
Trim54-201ENSMUST00000013771 Dhx38Q80X98 1228 aa21.05■□□□□ 0.96
Trim54-201ENSMUST00000013771 Nutm1Q8BHP2 1126 aa21.05■□□□□ 0.96
Trim54-201ENSMUST00000013771 Rassf10Q8BL43 508 aa21.05■□□□□ 0.96
Trim54-201ENSMUST00000013771 Stag1Q9D3E6 1258 aa21.05■□□□□ 0.96
Trim54-201ENSMUST00000013771 Ankrd63A2ARS0 390 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Upf2A2AT37 1269 aaKnown RBP21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Nova2D3YVV7 556 aaKnown RBP21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 CrkQ64010 304 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Fbxo3Q9DC63 480 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Tceal9Q9DD24 104 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Sult6b1P0CC03 303 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Spryd7Q3TFQ1 196 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Trmt1Q3TX08 663 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Map3k12Q60700 888 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Ireb2Q811J3 963 aaKnown RBP21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 SpidrQ8BGX7 933 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Fam83aQ8K2P2 436 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Pcdhb5Q91XZ5 792 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Rrs1Q9CYH6 365 aaKnown RBP21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Zbtb12Q9Z150 459 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Arih1Q9Z1K5 555 aa21.04■□□□□ 0.96
Trim54-201ENSMUST00000013771 Sept9Q80UG5 583 aa21.03■□□□□ 0.96
Trim54-201ENSMUST00000013771 Sulf1Q8K007 870 aa21.03■□□□□ 0.96
Trim54-201ENSMUST00000013771 Lysmd1Q9D0E3 226 aa21.03■□□□□ 0.96
Trim54-201ENSMUST00000013771 Q3UK37 420 aa21.02■□□□□ 0.96
Trim54-201ENSMUST00000013771 Sh2d1b2Q45HK4 132 aa21.02■□□□□ 0.96
Trim54-201ENSMUST00000013771 Ddx49Q4FZF3 480 aaKnown RBP21.02■□□□□ 0.96
Trim54-201ENSMUST00000013771 Rbm27Q5SFM8 1060 aaKnown RBP21.02■□□□□ 0.96
Trim54-201ENSMUST00000013771 A0A1W2P7S8 802 aa21.01■□□□□ 0.95
Trim54-201ENSMUST00000013771 CenpbP27790 599 aa21.01■□□□□ 0.95
Trim54-201ENSMUST00000013771 Map2k1P31938 393 aa21.01■□□□□ 0.95
Trim54-201ENSMUST00000013771 Kiaa0753Q6A000 959 aa21.01■□□□□ 0.95
Trim54-201ENSMUST00000013771 Cdc5lQ6A068 802 aaKnown RBP21.01■□□□□ 0.95
Trim54-201ENSMUST00000013771 Tmem87bQ8BKU8 555 aa21.01■□□□□ 0.95
Trim54-201ENSMUST00000013771 Atg9aQ68FE2 551 aa21■□□□□ 0.95
Trim54-201ENSMUST00000013771 Aldh1l1Q8R0Y6 902 aa21■□□□□ 0.95
Trim54-201ENSMUST00000013771 Ciao1Q99KN2 339 aa21■□□□□ 0.95
Trim54-201ENSMUST00000013771 RarsQ9D0I9 660 aaKnown RBP21■□□□□ 0.95
Trim54-201ENSMUST00000013771 Npc1l1Q6T3U4 1333 aa21■□□□□ 0.95
Trim54-201ENSMUST00000013771 CpdO89001 1377 aa21■□□□□ 0.95
Trim54-201ENSMUST00000013771 Prss51A0A286YDY8 319 aa20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 Arfgef1G3X9K3 1846 aaKnown RBP20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 Gm4340L7N2C4 268 aa20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 L1camP11627 1260 aa20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 Nbr1P97432 988 aa20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 Mapk4Q6P5G0 583 aa20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 Ccdc148Q6P5U8 527 aa20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 ParnQ8VDG3 624 aa20.99■□□□□ 0.95
Trim54-201ENSMUST00000013771 Mapkapk5O54992 473 aa20.98■□□□□ 0.95
Trim54-201ENSMUST00000013771 Krt74Q6IFZ9 495 aa20.98■□□□□ 0.95
Trim54-201ENSMUST00000013771 Trnp1Q80ZI1 223 aa20.98■□□□□ 0.95
Trim54-201ENSMUST00000013771 Chd5A2A8L1 1946 aa20.98■□□□□ 0.95
Trim54-201ENSMUST00000013771 Ankrd44B2RXR6 993 aa20.97■□□□□ 0.95
Trim54-201ENSMUST00000013771 Atp2b3Q0VF55 1220 aa20.97■□□□□ 0.95
Trim54-201ENSMUST00000013771 Rasa3Q60790 834 aa20.97■□□□□ 0.95
Trim54-201ENSMUST00000013771 Tmem39bQ810L4 492 aa20.97■□□□□ 0.95
Trim54-201ENSMUST00000013771 Il31raQ8K5B1 716 aa20.97■□□□□ 0.95
Trim54-201ENSMUST00000013771 Tmod2Q9JKK7 351 aa20.97■□□□□ 0.95
Trim54-201ENSMUST00000013771 Brca1P48754 1812 aa20.97■□□□□ 0.95
Trim54-201ENSMUST00000013771 Irx3P81067 507 aa20.96■□□□□ 0.95
Trim54-201ENSMUST00000013771 Klrg2Q3UM83 387 aa20.96■□□□□ 0.95
Trim54-201ENSMUST00000013771 Kansl1lQ5DTI6 991 aa20.96■□□□□ 0.95
Trim54-201ENSMUST00000013771 NsmfQ99NF2 532 aa20.96■□□□□ 0.95
Trim54-201ENSMUST00000013771 Myh13B1AR69 1938 aa20.96■□□□□ 0.95
Trim54-201ENSMUST00000013771 Ldlrad1D3YYZ1 218 aa20.95■□□□□ 0.95
Trim54-201ENSMUST00000013771 Atoh1P48985 351 aa20.95■□□□□ 0.95
Trim54-201ENSMUST00000013771 Eif5bQ05D44 1216 aaKnown RBP20.95■□□□□ 0.95
Trim54-201ENSMUST00000013771 Gxylt1Q3UHH8 404 aa20.95■□□□□ 0.95
Trim54-201ENSMUST00000013771 Kif22Q3V300 660 aa20.95■□□□□ 0.95
Trim54-201ENSMUST00000013771 Tmc2Q8R4P4 888 aa20.95■□□□□ 0.95
Trim54-201ENSMUST00000013771 Kdm3aQ6PCM1 1323 aa20.95■□□□□ 0.94
Trim54-201ENSMUST00000013771 CnpP16330 420 aa20.95■□□□□ 0.94
Trim54-201ENSMUST00000013771 Pa2g4P50580 394 aaKnown RBP20.95■□□□□ 0.94
Trim54-201ENSMUST00000013771 Noc3lQ8VI84 807 aaKnown RBP20.95■□□□□ 0.94
Trim54-201ENSMUST00000013771 Gbp7Q91Z40 638 aa20.95■□□□□ 0.94
Trim54-201ENSMUST00000013771 Cry2Q9R194 592 aa20.95■□□□□ 0.94
Trim54-201ENSMUST00000013771 Btn2a2A4QPC6 514 aa20.94■□□□□ 0.94
Trim54-201ENSMUST00000013771 Izumo3A6PWV3 263 aa20.94■□□□□ 0.94
Trim54-201ENSMUST00000013771 Cacnb3P54285 484 aa20.94■□□□□ 0.94
Trim54-201ENSMUST00000013771 Ppp1r21Q3TDD9 780 aa20.94■□□□□ 0.94
Trim54-201ENSMUST00000013771 Lgr6Q3UVD5 967 aa20.94■□□□□ 0.94
Trim54-201ENSMUST00000013771 Slc4a10Q5DTL9 1118 aa20.94■□□□□ 0.94
Trim54-201ENSMUST00000013771 Clrn2B2RVW2 232 aa20.93■□□□□ 0.94
Trim54-201ENSMUST00000013771 Cbx2P30658 519 aa20.93■□□□□ 0.94
Trim54-201ENSMUST00000013771 Sept1P42209 366 aa20.93■□□□□ 0.94
Trim54-201ENSMUST00000013771 Fgd1P52734 960 aa20.93■□□□□ 0.94
Trim54-201ENSMUST00000013771 Gm11437Q5QR91 290 aa20.93■□□□□ 0.94
Trim54-201ENSMUST00000013771 Gm3893E9Q1I1 302 aa20.92■□□□□ 0.94
Trim54-201ENSMUST00000013771 Washc4Q3UMB9 1173 aa20.92■□□□□ 0.94
Trim54-201ENSMUST00000013771 Rbm15bQ6PHZ5 887 aaKnown RBP20.92■□□□□ 0.94
Trim54-201ENSMUST00000013771 Sptlc3Q8BG54 563 aa20.92■□□□□ 0.94
Trim54-201ENSMUST00000013771 Dis3l2Q8CI75 870 aaKnown RBP20.92■□□□□ 0.94
Trim54-201ENSMUST00000013771 Stk36Q69ZM6 1316 aa20.91■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms