RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 OR14J1Q9UGF5 321 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 GLS2Q9UI32 602 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 EDARQ9UNE0 448 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 PPP1R3CQ9UQK1 317 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 NPTNQ9Y639 398 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 NAPSAO96009 420 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 ZNF735P0CB33 412 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 AMY2BP19961 511 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 LMO1P25800 156 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 RBM39Q14498 530 aaKnown RBP17.48■□□□□ 0.39
PNKP-203ENST00000593946 MICBQ29980 383 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 ACTBL2Q562R1 376 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 ZNF782Q6ZMW2 699 aaPredicted RBP17.48■□□□□ 0.39
PNKP-203ENST00000593946 Q6ZPA2 131 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 BPIFB2Q8N4F0 458 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 OR51S1Q8NGJ8 323 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 NEK7Q8TDX7 302 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 SAP30LQ9HAJ7 183 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 DECR2Q9NUI1 292 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 NUDT15Q9NV35 164 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 NUBP2Q9Y5Y2 271 aa17.48■□□□□ 0.39
PNKP-203ENST00000593946 RAI1Q7Z5J4 1906 aaPredicted RBP17.48■□□□□ 0.39
PNKP-203ENST00000593946 FAM221AA4D161 298 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 SIRPB1O00241 398 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 CEBPDP49716 269 aaPredicted RBP17.47■□□□□ 0.39
PNKP-203ENST00000593946 SNRPD2P62316 118 aaKnown RBP17.47■□□□□ 0.39
PNKP-203ENST00000593946 BTN2A1Q7KYR7 527 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 OR11L1Q8NGX0 322 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 IGKV1D-8A0A087WSZ0 117 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 RFPL4AA6NLU0 287 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 RFPL4AL1F8VTS6 287 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 PYCARD-AS1I3L0S3 204 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 IFNL4K9M1U5 179 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 AMY2AP04746 511 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 PAN3Q58A45 887 aaKnown RBP17.47■□□□□ 0.39
PNKP-203ENST00000593946 VAX1Q5SQQ9 334 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 SHEQ5VZ18 495 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 SLC6A7Q99884 636 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 SEBOXQ9HB31 216 aaPredicted RBP17.47■□□□□ 0.39
PNKP-203ENST00000593946 ETAA1Q9NY74 926 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 TREM2Q9NZC2 230 aa17.47■□□□□ 0.39
PNKP-203ENST00000593946 A0A1W2PPR1 153 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 NDUFB6O95139 128 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 PMP2P02689 132 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 TAS2R46P59540 309 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 RSBN1Q5VWQ0 802 aaPredicted RBP17.46■□□□□ 0.39
PNKP-203ENST00000593946 TGIF2LYQ8IUE0 185 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 OR5AP2Q8NGF4 316 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 SLC2A8Q9NY64 477 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 WIPI2Q9Y4P8 454 aa17.46■□□□□ 0.39
PNKP-203ENST00000593946 KLF2Q9Y5W3 355 aaPredicted RBP17.46■□□□□ 0.39
PNKP-203ENST00000593946 PSG2P11465 335 aa17.45■□□□□ 0.38
PNKP-203ENST00000593946 MDH2P40926 338 aaKnown RBP17.45■□□□□ 0.38
PNKP-203ENST00000593946 RBMS2Q15434 407 aaKnown RBP17.45■□□□□ 0.38
PNKP-203ENST00000593946 MEX3BQ6ZN04 569 aaKnown RBP17.45■□□□□ 0.38
PNKP-203ENST00000593946 BOLLQ8N9W6 283 aaKnown RBP17.45■□□□□ 0.38
PNKP-203ENST00000593946 HPS1Q92902 700 aa17.45■□□□□ 0.38
PNKP-203ENST00000593946 C20orf85Q9H1P6 137 aa17.45■□□□□ 0.38
PNKP-203ENST00000593946 RIMS4Q9H426 269 aaPredicted RBP17.45■□□□□ 0.38
PNKP-203ENST00000593946 TMEM165Q9HC07 324 aa17.45■□□□□ 0.38
PNKP-203ENST00000593946 DNAJB11Q9UBS4 358 aa17.45■□□□□ 0.38
PNKP-203ENST00000593946 ANXA10Q9UJ72 324 aa17.45■□□□□ 0.38
PNKP-203ENST00000593946 IGKV1D-17A0A075B6S4 117 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 TRAV6A0A075B6T7 132 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 TRBV6-6A0A0A6YYG2 114 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 A0A0B4J293 547 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 FUOMA2VDF0 154 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 A6NNC1 897 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 OR2AT4A6NND4 320 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 DISC1C4P0D8 188 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 INMT-MINDY4F8WBC2 141 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 PSPNO60542 156 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 CYB5R3P00387 301 aaPredicted RBP17.44■□□□□ 0.38
PNKP-203ENST00000593946 CSN2P05814 226 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 PPOXP50336 477 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 ZMYND11Q15326 602 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 SRSF7Q16629 238 aaKnown RBP eCLIP17.44■□□□□ 0.38
PNKP-203ENST00000593946 Q6ZS49 121 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 CD177Q8N6Q3 437 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 OR5T2Q8NGG2 359 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 OR5H2Q8NGV7 314 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 PPA2Q9H2U2 334 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 CHMP1AQ9HD42 196 aaPredicted RBP17.44■□□□□ 0.38
PNKP-203ENST00000593946 CBLN4Q9NTU7 201 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 DCHS2Q6V1P9 2916 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 IRF2P14316 349 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 PRDX2P32119 198 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 BCAP31P51572 246 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 RAG2P55895 527 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 BTG1P62324 171 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 SRSF1Q07955 248 aaKnown RBP eCLIP17.44■□□□□ 0.38
PNKP-203ENST00000593946 CHRFAM7AQ494W8 412 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 C11orf71Q6IPW1 123 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 CADM3Q8N126 398 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 GAPTQ8N292 157 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 MRPL30Q8TCC3 161 aaKnown RBP17.44■□□□□ 0.38
PNKP-203ENST00000593946 PRRT1Q99946 306 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 ZNF286AQ9HBT8 521 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 DCAF16Q9NXF7 216 aa17.44■□□□□ 0.38
PNKP-203ENST00000593946 SCP2D1Q9UJQ7 156 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms