RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 GRB2P62993 217 aaKnown RBP11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 TNFRSF9Q07011 255 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 PNRC1Q12796 327 aaPredicted RBP11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 SLC16A14Q7RTX9 510 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 TP53RKQ96S44 253 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 C3orf85A0A1B0GTC6 90 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 A0A1W2PPQ1 181 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 IGKV3-11P04433 115 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 ZP4Q12836 540 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 FAM185AQ8N0U4 392 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 OR5T1Q8NG75 326 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 C18orf12Q96KH6 178 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 HIST1H2AAQ96QV6 131 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 GPHA2Q96T91 129 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 DUSP15Q9H1R2 295 aaPredicted RBP11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 ALKBH4Q9NXW9 302 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 OR2J2O76002 312 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 CA3P07451 260 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 GALNSP34059 522 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 RPS18P62269 152 aaKnown RBP11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 YPEL5P62699 121 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 COL10A1Q03692 680 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 HNF4GQ14541 408 aa11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 MSI2Q96DH6 328 aaKnown RBP11.18□□□□□ -0.62
SFSWAP-209ENST00000540469 TLX3O43711 291 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 PNLIPP16233 465 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 MYBPHQ13203 477 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 OR8G5Q8NG78 346 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 RPP25Q9BUL9 199 aaKnown RBP11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 ZNF581Q9P0T4 197 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 CBY1Q9Y3M2 126 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 ZNF705FA8MVS1 300 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 M0R143 59 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 DHRS3O75911 302 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 NPSP0C0P6 89 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 ZNF705DP0CH99 300 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 ZNF705BP0CI00 300 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 AADACP22760 399 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 RPL29P47914 159 aaKnown RBP11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 FOXL2P58012 376 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 C17orf67Q0P5P2 114 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 BATFQ16520 125 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 ZNF705AQ6ZN79 300 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 ST8SIA1Q92185 356 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 FGF14Q92915 247 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 TMEM18Q96B42 140 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 WFIKKN1Q96NZ8 548 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 SMIM7Q9BQ49 75 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 CALHM2Q9HA72 323 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 IGHV5-51A0A0C4DH38 117 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 LIPT2A6NK58 231 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 NCR3LG1Q68D85 454 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 PP6455Q8WZ26 134 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 GLRX2Q9NS18 164 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 PLEK2Q9NYT0 353 aa11.17□□□□□ -0.62
SFSWAP-209ENST00000540469 A0A1B0GU03 582 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 A0A1W2PQF6 199 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 H7BYZ3 331 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 CDS2O95674 445 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 FBLP22087 321 aaKnown RBP11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 SRPXP78539 464 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 RPUSD4Q96CM3 377 aaKnown RBP11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 BORCS8Q96FH0 119 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 MRGPRX1Q96LB2 322 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 TM2D1Q9BX74 207 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 OPN3Q9H1Y3 402 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 KLHL13Q9P2N7 655 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 E9PLN8 166 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 PAX5Q02548 391 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 SHHQ15465 462 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 TMEM240Q5SV17 173 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 ZNF100Q8IYN0 542 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 SLC22A18ASQ8N1D0 253 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 OR4D5Q8NGN0 318 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 Q96M66 194 aa11.16□□□□□ -0.62
SFSWAP-209ENST00000540469 ANKUB1A6NFN9 424 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 MPPED1O15442 326 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 CHST1O43916 411 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 OR7C1O76099 320 aaPredicted RBP11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 BCL2P10415 239 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 IQCJQ1A5X6 159 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 PIGYQ3MUY2 71 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 RBM24Q9BX46 236 aaKnown RBP11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 IL23AQ9NPF7 189 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 RALGAPA1Q6GYQ0 2036 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 WDR87Q6ZQQ6 2873 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 SHISA7A6NL88 538 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 TRDCB7Z8K6 153 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 PROB1E7EW31 1015 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 IFNA1P01562 189 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 LMO1P25800 156 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 CLDN17P56750 224 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 TMEM267Q0VDI3 215 aaPredicted RBP11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 P2RY6Q15077 328 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 OR1N1Q8NGS0 311 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 OR2AE1Q8NHA4 323 aa11.15□□□□□ -0.62
SFSWAP-209ENST00000540469 NAT6Q93015 286 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms