RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SPICQ8N5J4 248 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 NXF2Q9GZY0 626 aaKnown RBP16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 IFT22Q9H7X7 185 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 KAAG1Q9UBP8 84 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 OR14J1Q9UGF5 321 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 CR1P17927 2039 aa16.55■□□□□ 0.24
PDLIM2-221ENST00000622702 SH2D1BO14796 132 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 GEMIN2O14893 280 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 CPT2P23786 658 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 DUSP1P28562 367 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 TAF9Q16594 264 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 Q6P435 159 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 ZNF788Q6ZQV5 615 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 CD177Q8N6Q3 437 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 SLC25A38Q96DW6 304 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 SDSLQ96GA7 329 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 CMTM3Q96MX0 182 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 RHBDL2Q9NX52 303 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 COMMD3Q9UBI1 195 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 A3GALT2U3KPV4 340 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 A0A096LNT2 108 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 CEACAM18A8MTB9 384 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 CHRM2P08172 466 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 LMO1P25800 156 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 BIVMQ86UB2 503 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 GAL3ST1Q99999 423 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 GSX1Q9H4S2 264 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 ZNF665Q9H7R5 613 aa16.54■□□□□ 0.24
PDLIM2-221ENST00000622702 A0A0A6YYD4 124 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 METTL21EPA6NDL7 271 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 NKX6-3A6NJ46 265 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 H3BUI4 141 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 OR7C1O76099 320 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 OR2H2O95918 312 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 USF1P22415 310 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 GABRA2P47869 451 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 CEBPDP49716 269 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 IKZF1Q13422 519 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 CNPY1Q3B7I2 92 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 UBE2NLQ5JXB2 153 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 SLC36A1Q7Z2H8 476 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 SAMD12Q8N8I0 201 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 CHST4Q8NCG5 386 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 MCFD2Q8NI22 146 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 GAFA1Q96PS6 74 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 CCL13Q99616 98 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 NICN1Q9BSH3 213 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 ABCG5Q9H222 651 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 MAB21L2Q9Y586 359 aa16.53■□□□□ 0.24
PDLIM2-221ENST00000622702 DEGS1O15121 323 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 SIGLEC5O15389 551 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 TFF1P04155 84 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 ZNF44P15621 663 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 LOXL1Q08397 574 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 SIGIRRQ6IA17 410 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 LYPD2Q6UXB3 125 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 ZNF561Q8N587 486 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 OR56B1Q8NGI3 324 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 MED30Q96HR3 178 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 MMP27Q9H306 513 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 PATZ1Q9HBE1 687 aaKnown RBP16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 SPACA1Q9HBV2 294 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 ZNF581Q9P0T4 197 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 RCC2Q9P258 522 aaKnown RBP16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 MIOXQ9UGB7 285 aa16.52■□□□□ 0.23
PDLIM2-221ENST00000622702 IGHV4-61A0A0C4DH41 118 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 FOXI3A8MTJ6 420 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 F5H0A9 414 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 RAB27BO00194 218 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 TMPRSS2O15393 492 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 ADAM20O43506 726 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 ZNF737O75373 536 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 SCGNO76038 276 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 APOA1P02647 267 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 GABRR1P24046 479 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 IL13RA1P78552 427 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 COL10A1Q03692 680 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 PDCD1Q15116 288 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 RAB40AQ8WXH6 277 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 ATG5Q9H1Y0 275 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 METRNQ9UJH8 293 aa16.51■□□□□ 0.23
PDLIM2-221ENST00000622702 TRAV24A0A0B4J272 114 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 SLC33A1O00400 549 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 CTDSP2O14595 271 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 HPGDSO60760 199 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 LY6G6DO95868 133 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 WNT2P09544 360 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 RPS2P15880 293 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 PITPNBP48739 271 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 VEGFCP49767 419 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 SCN1BQ07699 218 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 RAB12Q6IQ22 244 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 CLEC9AQ6UXN8 241 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 CMTM4Q8IZR5 234 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 FAM216BQ8N7L0 139 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 CLDND2Q8NHS1 167 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 NEIL1Q96FI4 390 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 C6orf62Q9GZU0 229 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 FAM234AQ9H0X4 552 aa16.5■□□□□ 0.23
PDLIM2-221ENST00000622702 NARFLQ9H6Q4 476 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms