RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GREB1LQ9C091 1923 aaPredicted RBP14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 IGHV3-43A0A0B4J1X8 118 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 MOSPD3O75425 235 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 IGHV3-43DP0DP04 118 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 NQO2P16083 231 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 TMEM33P57088 247 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 CLEC18BQ6UXF7 455 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 RNF133Q8WVZ7 376 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 ST6GAL2Q96JF0 529 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 KIF13BQ9NQT8 1826 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 LANCL1O43813 399 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 ZNF737O75373 536 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 NTN1O95631 604 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 SOX8P57073 446 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 SOCS1O15524 211 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 SMIM17P0DL12 118 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 SELENOPP49908 381 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 OR10AC1Q8NH08 325 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 OR4S2Q8NH73 311 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 WDR54Q9H977 334 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 DNPH1O43598 174 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 CCL4P13236 92 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 ACSM6Q6P461 480 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 TBC1D26Q86UD7 250 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 MYPOPQ86VE0 399 aaPredicted RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 TUSC5Q8IXB3 177 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 NXF2Q9GZY0 626 aaKnown RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 DUSP15Q9H1R2 295 aaPredicted RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 ZMIZ1Q9ULJ6 1067 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 GOLT1BQ9Y3E0 138 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 PPIHO43447 177 aaKnown RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 ADAP1O75689 374 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 PEBP1P30086 187 aaKnown RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 CD200P41217 278 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 GALR1P47211 349 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 SRSF5Q13243 272 aaKnown RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 INPP5JQ15735 1006 aaPredicted RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 ZNF66Q6ZN08 573 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 OR10G4Q8NGN3 311 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 OR10G9Q8NGN4 311 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 OR10G7Q8NGN6 311 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 OR6S1Q8NH40 331 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 IGHV5-10-1A0A0J9YXX1 117 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 SDHBP21912 280 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 CEACAM3P40198 252 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 BHLHA15Q7RTS1 189 aaPredicted RBP14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 CA5BP1Q8WTZ4 195 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 ASB5Q8WWX0 329 aa14.57□□□□□ -0.08
PCDHA1-203ENST00000504120 S100A4P26447 101 aaKnown RBP14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 COL13A1Q5TAT6 717 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 FA2HQ7L5A8 372 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 NOL4LQ96MY1 436 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 OR2H1Q9GZK4 316 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 OOEPA6NGQ2 149 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 C3orf80F5H4A9 247 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 MBPP02686 304 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 SLC25A5P05141 298 aaKnown RBP14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 ANKRD34CP0C6C1 535 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 GNG4P50150 75 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 ZXDAP98168 799 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 OR2M3Q8NG83 312 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 OR1L4Q8NGR5 311 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 SMOC1Q9H4F8 434 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 HSD17B13Q7Z5P4 300 aaPredicted RBP14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 SMRP1Q8NCR6 262 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 VSTM2AQ8TAG5 236 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 THYN1Q9P016 225 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 CRHP06850 196 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 MMP16P51512 607 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 SLC25A42Q86VD7 318 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 SH2D2AQ9NP31 389 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 FSCN3Q9NQT6 498 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 CA10Q9NS85 328 aa14.56□□□□□ -0.08
PCDHA1-203ENST00000504120 TRAV38-1A0A0B4J264 116 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 A0A1W2PQF6 199 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 MAGEA5P43359 124 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 POLR2GP62487 172 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 C9orf40Q8IXQ3 194 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 FAM90A27PA6NNH2 459 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 FOXS1O43638 330 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 SYNGR2O43760 224 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 CCL3P10147 92 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 GPR35Q9HC97 309 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 GEMIN2O14893 280 aaKnown RBP14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 MPV17LQ2QL34 196 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 C19orf35Q6ZS72 473 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 VDAC1P21796 283 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 FOXO1Q12778 655 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 FNDC7Q5VTL7 733 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 CLEC9AQ6UXN8 241 aa14.55□□□□□ -0.08
PCDHA1-203ENST00000504120 MRPS11P82912 194 aaKnown RBP14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 RNF2Q99496 336 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 MEX3AA1L020 520 aaKnown RBP14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 PHOX2AO14813 284 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 LIFP15018 202 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 KLF9Q13886 244 aaPredicted RBP14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 ATP5SQ99766 215 aa14.54□□□□□ -0.08
PCDHA1-203ENST00000504120 RAB1BQ9H0U4 201 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 239.2 ms