RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ZCCHC14Q8WYQ9 949 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 PTX4Q96A99 478 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 PLA2G3Q9NZ20 509 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 EHFQ9NZC4 300 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 LRIT1Q9P2V4 623 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 B3GALT5Q9Y2C3 310 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 LOC107986453A0A1B0GWG9 222 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 YPEL1O60688 119 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 CDKN1AP38936 164 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 NUP54Q7Z3B4 507 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 C9orf40Q8IXQ3 194 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 OR4N2Q8NGD1 307 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 TMEM171Q8WVE6 324 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 YPEL2Q96QA6 119 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 VPS25Q9BRG1 176 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 SDF2L1Q9HCN8 221 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 HS3ST3A1Q9Y663 406 aa13.72□□□□□ -0.21
CTDSP1-201ENST00000273062 A0A1W2PN81 502 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 C10orf142B7Z368 130 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 CIDEAO60543 219 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 TSPAN2O60636 221 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 OR2J2O76002 312 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 OR5G3P0C626 314 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 ZNF43P17038 809 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 AMY2BP19961 511 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 CHRNA7P36544 502 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 EMP2P54851 167 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 HHEXQ03014 270 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 CHRFAM7AQ494W8 412 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 TPTE2P1Q5T6R2 138 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 CIB3Q96Q77 187 aaPredicted RBP13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 TSPAN32Q96QS1 320 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 EMC9Q9Y3B6 208 aa13.71□□□□□ -0.21
CTDSP1-201ENST00000273062 IGKV1D-42A0A075B6H8 117 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 ZFP92A6NM28 416 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 CYR61O00622 381 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF205O95201 554 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 PPBPP02775 128 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 RAB38P57729 211 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 FDX2Q6P4F2 183 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 TDHQ8IZJ6 230 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF2Q9BSG1 426 aaPredicted RBP13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 LMF2Q9BU23 707 aaKnown RBP13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 BANF2Q9H503 90 aa13.71□□□□□ -0.22
CTDSP1-201ENST00000273062 A0A0J9YY10 115 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 LOC102723971A0A1B0GUV8 181 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 ANKUB1A6NFN9 424 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 CTSEP14091 401 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 TMEM50BP56557 158 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 CLDN17P56750 224 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 ALG10Q5BKT4 473 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 FHL5Q5TD97 284 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 LYZL2Q7Z4W2 148 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 CATSPERDQ86XM0 798 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 GCNT2Q8N0V5 402 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF321PQ8N8H1 164 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 LRRC75AQ8NAA5 344 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 ADAMTS18Q8TE60 1221 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 PYGO2Q9BRQ0 406 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 LRRC61Q9BV99 259 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 SLC7A11Q9UPY5 501 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 TNRC18O15417 2968 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF117Q03924 483 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 ACTL10Q5JWF8 245 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 TSPO2Q5TGU0 170 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 UNQ5815/PRO19632Q6UWF5 114 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 Q6ZWC4 215 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 CA13Q8N1Q1 262 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 PGAM5Q96HS1 289 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 GPX7Q96SL4 187 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 LPAR5Q9H1C0 372 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 LRP12Q9Y561 859 aa13.7□□□□□ -0.22
CTDSP1-201ENST00000273062 SDK1Q7Z5N4 2213 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 FAM24AA6NFZ4 105 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 TNFSF12O43508 249 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 EWSR1Q01844 656 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■■□□□ 11.9
CTDSP1-201ENST00000273062 UBE2V1Q13404 147 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 ADIRFQ15847 76 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 DMRTC1Q5HYR2 192 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 TEX43Q6ZNM6 134 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 SMIM15Q7Z3B0 74 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 OR51G1Q8NGK1 321 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 ARHGAP5-AS1Q96IT6 56 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 RASL10BQ96S79 203 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 CCDC3Q9BQI4 270 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 DDAH2O95865 285 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 IFNA21P01568 189 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 CPEB2Q7Z5Q1 589 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 ANAPC10Q9UM13 185 aa13.69□□□□□ -0.22
CTDSP1-201ENST00000273062 IGKV1D-8A0A087WSZ0 117 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 FAM230AA0A1W2PPH8 454 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 HRKO00198 91 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 P2RY10O00398 339 aa13.68□□□□□ -0.22
CTDSP1-201ENST00000273062 LILRA1O75019 489 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms