RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 M1APQ8TC57 530 aa14.95□□□□□ -0.02
PTPRA-205ENST00000399903 RTN4IP1Q8WWV3 396 aaPredicted RBP14.95□□□□□ -0.02
PTPRA-205ENST00000399903 LRFN1Q9P244 771 aa14.95□□□□□ -0.02
PTPRA-205ENST00000399903 VDAC3Q9Y277 283 aa14.95□□□□□ -0.02
PTPRA-205ENST00000399903 IGHV3-20A0A0C4DH32 117 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 PHF1O43189 567 aaPredicted RBP14.94□□□□□ -0.02
PTPRA-205ENST00000399903 SRP19P09132 144 aaKnown RBP14.94□□□□□ -0.02
PTPRA-205ENST00000399903 FOLR1P15328 257 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 HLA-DQA1Q5Y7H0 255 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 MRPL41Q8IXM3 137 aaKnown RBP14.94□□□□□ -0.02
PTPRA-205ENST00000399903 BATF2Q8N1L9 274 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 ARHGEF39Q8N4T4 335 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 ZNF283Q8N7M2 679 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 OR11L1Q8NGX0 322 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 A8MWP6 167 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 C9J4A7 227 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 ST8SIA3O43173 380 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 ANOS1P23352 680 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 CD27P26842 260 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 TNFRSF9Q07011 255 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 NUP54Q7Z3B4 507 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 ADAMTS18Q8TE60 1221 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 YPEL4Q96NS1 127 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 GPHA2Q96T91 129 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 GINS3Q9BRX5 216 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 TP53TG5Q9Y2B4 290 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 FAM230AA0A1W2PPH8 454 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 A6NNC1 897 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 SHISA8B8ZZ34 492 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 IFNL4K9M1U5 179 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 GZMBP10144 247 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 EFNA3P52797 238 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 LHFPL1Q86WI0 220 aa14.94□□□□□ -0.02
PTPRA-205ENST00000399903 THAP3Q8WTV1 239 aaPredicted RBP14.94□□□□□ -0.02
PTPRA-205ENST00000399903 A0A1W2PR77 199 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 FAM221BA6H8Z2 402 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 ISG15P05161 165 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 PDCD1Q15116 288 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.93□□□□□ -0.02
PTPRA-205ENST00000399903 DBX2Q6ZNG2 339 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 OR5T1Q8NG75 326 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 LIPHQ8WWY8 451 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 TMED3Q9Y3Q3 217 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 SSSCA1O60232 199 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 RPL29P47914 159 aaKnown RBP14.93□□□□□ -0.02
PTPRA-205ENST00000399903 IDH3GP51553 393 aaPredicted RBP14.93□□□□□ -0.02
PTPRA-205ENST00000399903 FOXO1Q12778 655 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 LYPD6Q86Y78 171 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 TMEM37Q8WXS4 190 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 NDUFAF3Q9BU61 184 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 UCK1Q9HA47 277 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 FAM206AQ9NX38 181 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 SDK2Q58EX2 2172 aa14.93□□□□□ -0.02
PTPRA-205ENST00000399903 PLPP3O14495 311 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 BCAT2O15382 392 aaPredicted RBP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 SRSF10O75494 262 aaKnown RBP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 SCGB1D1O95968 90 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 CD200P41217 278 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 GLIPR1P48060 266 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 BIDP55957 195 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 HLA-DRB3P79483 266 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 EWSR1Q01844 656 aaKnown RBP eCLIP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 SLC10A1Q14973 349 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 PPA1Q15181 289 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 MPV17LQ2QL34 196 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 COL13A1Q5TAT6 717 aaPredicted RBP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 DNM1P34Q6PK57 102 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 LCN15Q6UWW0 184 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 OR2AJ1Q8NGZ0 328 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 OR14L1PQ8NHC6 308 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 MCTS1Q9ULC4 181 aaKnown RBP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 K7N7A8 449 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 CNOT4O95628 575 aaKnown RBP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 ZNF728P0DKX0 622 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 CFHR1Q03591 330 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 TWSG1Q9GZX9 223 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 H3BP45 60 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 HLA-HP01893 362 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 DBHP09172 617 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 FCGR2AP12318 317 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 FGF8P55075 233 aaPredicted RBP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 ZNF121P58317 390 aaPredicted RBP14.92□□□□□ -0.02
PTPRA-205ENST00000399903 VAMP2P63027 116 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 TLE3Q04726 772 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 OR5AS1Q8N127 324 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 PECRQ9BY49 303 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 PRDM6Q9NQX0 595 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 GPR27Q9NS67 375 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 SUSD2Q9UGT4 822 aa14.92□□□□□ -0.02
PTPRA-205ENST00000399903 XKRY2A2RUG3 117 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 IGLV3-19P01714 112 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 AMBPP02760 352 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 PGCP20142 388 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 ERVS71-1P61550 626 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 SMAD4Q13485 552 aaKnown RBP14.91□□□□□ -0.02
PTPRA-205ENST00000399903 FAM69BQ5VUD6 431 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 ZNF705AQ6ZN79 300 aaPredicted RBP14.91□□□□□ -0.02
PTPRA-205ENST00000399903 CMTM1Q8IZ96 169 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 OR5C1Q8NGR4 320 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 FAAP24Q9BTP7 215 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms