RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 LIPKQ5VXJ0 399 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 ASCL4Q6XD76 172 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 TMEM185AQ8NFB2 350 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 MGLLQ99685 303 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 TMED9Q9BVK6 235 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 FAM234AQ9H0X4 552 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 NOX4Q9NPH5 578 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 IL36RNQ9UBH0 155 aa16.85■□□□□ 0.29
CLDN3-201ENST00000395145 A0A1W2PPK0 400 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 NDUFB7P17568 137 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 PRKACAP17612 351 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 ZNF93P35789 620 aaPredicted RBP16.84■□□□□ 0.29
CLDN3-201ENST00000395145 COL10A1Q03692 680 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 EMX1Q04741 257 aaPredicted RBP16.84■□□□□ 0.29
CLDN3-201ENST00000395145 SCGB2A2Q13296 93 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 ARMCX4Q5H9R4 360 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 SATL1Q86VE3 508 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 SVOPQ8N4V2 548 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 TNFAIP8L1Q8WVP5 186 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 GPER1Q99527 375 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 CNTD2Q9H8S5 307 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 LRRC42Q9Y546 428 aa16.84■□□□□ 0.29
CLDN3-201ENST00000395145 TRBV23-1A0A0A0MS06 115 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 MAGEA13PA6NCF6 341 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 K7N7A8 449 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 ZNF737O75373 536 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 HAND1O96004 215 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 TK1P04183 234 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 MMP9P14780 707 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 PTGFRP43088 359 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 BMXP51813 675 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 INSL4Q14641 139 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 TRAM1Q15629 374 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 KLF17Q5JT82 389 aaPredicted RBP16.83■□□□□ 0.28
CLDN3-201ENST00000395145 ELP2Q6IA86 826 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 CDH26Q8IXH8 852 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 PHC2Q8IXK0 858 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 KIR3DL3Q8N743 410 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 Q8NFD4 153 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 H1FXQ92522 213 aaKnown RBP16.83■□□□□ 0.28
CLDN3-201ENST00000395145 SIRPDQ9H106 197 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 ELL3Q9HB65 397 aaPredicted RBP16.83■□□□□ 0.28
CLDN3-201ENST00000395145 SF3B6Q9Y3B4 125 aaKnown RBP16.83■□□□□ 0.28
CLDN3-201ENST00000395145 KPTNQ9Y664 436 aa16.83■□□□□ 0.28
CLDN3-201ENST00000395145 EPHA1P21709 976 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 PSMA1P25786 263 aaKnown RBP16.82■□□□□ 0.28
CLDN3-201ENST00000395145 OR3A4PP47883 348 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 MTNR1BP49286 362 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 CAPZA1P52907 286 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 GP2P55259 537 aaKnown RBP16.82■□□□□ 0.28
CLDN3-201ENST00000395145 SPARTQ8N0X7 666 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 WDFY2Q96P53 400 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 IL36GQ9NZH8 169 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 GLS2Q9UI32 602 aa16.82■□□□□ 0.28
CLDN3-201ENST00000395145 ATRQ13535 2644 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 TOX4O94842 621 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 UCHL1P09936 223 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 CALCBP10092 127 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 RPS25P62851 125 aaKnown RBP16.81■□□□□ 0.28
CLDN3-201ENST00000395145 KCTD21Q4G0X4 260 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 METTL11BQ5VVY1 283 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 LYPD6Q86Y78 171 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 NKAIN3Q8N8D7 197 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 ASCC1Q8N9N2 400 aaKnown RBP16.81■□□□□ 0.28
CLDN3-201ENST00000395145 PHYHIPQ92561 330 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 SNX22Q96L94 193 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 NKX3-1Q99801 234 aaPredicted RBP16.81■□□□□ 0.28
CLDN3-201ENST00000395145 FAM192AQ9GZU8 254 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 NUP50Q9UKX7 468 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 GSTK1Q9Y2Q3 226 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 DSCAML1Q8TD84 2053 aa16.81■□□□□ 0.28
CLDN3-201ENST00000395145 TMEM82A0PJX8 343 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 MEGF11A6BM72 1044 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 SH2D1BO14796 132 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 MAS1P04201 325 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 LMO1P25800 156 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 DUSP1P28562 367 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 GABRA5P31644 462 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 ARF6P62330 175 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 FAM27D1Q5T7N8 215 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 UBE2UQ5VVX9 321 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 ZNF773Q6PK81 442 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 TMEM91Q6ZNR0 172 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 C17orf107Q6ZR85 190 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 CEACAM19Q7Z692 300 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 OR8H2Q8N162 312 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 OR51T1Q8NGJ9 327 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 OR5D13Q8NGL4 314 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 FCGR1BQ92637 280 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 TMEM203Q969S6 136 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 TBX15Q96SF7 602 aa16.8■□□□□ 0.28
CLDN3-201ENST00000395145 EXOSC4Q9NPD3 245 aaKnown RBP16.8■□□□□ 0.28
CLDN3-201ENST00000395145 IGHV4-38-2P0DP08 117 aa16.79■□□□□ 0.28
CLDN3-201ENST00000395145 SNU13P55769 128 aaKnown RBP16.79■□□□□ 0.28
CLDN3-201ENST00000395145 RPL31P62899 125 aaKnown RBP16.79■□□□□ 0.28
CLDN3-201ENST00000395145 RSU1Q15404 277 aa16.79■□□□□ 0.28
CLDN3-201ENST00000395145 SSX1Q16384 188 aa16.79■□□□□ 0.28
CLDN3-201ENST00000395145 TUSC1Q2TAM9 212 aa16.79■□□□□ 0.28
CLDN3-201ENST00000395145 C1orf122Q6ZSJ8 110 aa16.79■□□□□ 0.28
CLDN3-201ENST00000395145 CMTM4Q8IZR5 234 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms