RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TOMM34Q15785 309 aaPredicted RBP3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 PLPPR5Q32ZL2 321 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 ZNF544Q6NX49 715 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 NANOGNBQ7Z5D8 188 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 EGFL6Q8IUX8 553 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 CTAGE3PQ8IX95 158 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 RDH10Q8IZV5 341 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 GATSQ8NAP1 163 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 OR9K2Q8NGE7 335 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 C16orf78Q8WTQ4 265 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 PYROXD1Q8WU10 500 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 MARC2Q969Z3 335 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 EXOSC8Q96B26 276 aaKnown RBP3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 C16orf74Q96GX8 76 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 RNF145Q96MT1 663 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 FMO2Q99518 471 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 EBF4Q9BQW3 602 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 LRTM1Q9HBL6 345 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 EML4Q9HC35 981 aaKnown RBP3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 NMRK1Q9NWW6 199 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 KIF25Q9UIL4 384 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 V9GY05 133 aa3.97□□□□□ -1.77
RNU4-39P-201ENST00000362455 DSCAMO60469 2012 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 CHD3Q12873 2000 aaKnown RBP3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 IGHV3OR16-13A0A075B7E8 117 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 IGHV3-15A0A0B4J1V0 119 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 SYCE1LA8MT33 242 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 MANBAO00462 879 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 ABCD4O14678 606 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 LYZL6O75951 148 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 GAPDHP04406 335 aaKnown RBP3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 USF1P22415 310 aaPredicted RBP3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 IL12AP29459 219 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 MAGEA12P43365 314 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 GSSP48637 474 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 CARD18P57730 90 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 MRPS22P82650 360 aaKnown RBP3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 GK3PQ14409 553 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 RNF212Q495C1 297 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 CPTPQ5TA50 214 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 C1orf146Q5VVC0 180 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 HBMQ6B0K9 141 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 CYB5R2Q6BCY4 276 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 TMEM107Q6UX40 140 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 BHLHA15Q7RTS1 189 aaPredicted RBP3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 PAGE2Q7Z2X7 111 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 MED12LQ86YW9 2145 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF433Q8N7K0 673 aaPredicted RBP3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 CEP112Q8N8E3 955 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR1L6Q8NGR2 347 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 MAGEB18Q96M61 343 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 ARHGDIGQ99819 225 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 PKIBQ9C010 78 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 SELENOIQ9C0D9 397 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 STMN4Q9H169 189 aaPredicted RBP3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 PPA2Q9H2U2 334 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 ANKRD19PQ9H560 264 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 GLRX2Q9NS18 164 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 TAS2R9Q9NYW1 312 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 AHSPQ9NZD4 102 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 VPS29Q9UBQ0 182 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 BTNL2Q9UIR0 455 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 PSME2Q9UL46 239 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 ABCG2Q9UNQ0 655 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 KCNIP3Q9Y2W7 256 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF780BQ9Y6R6 833 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 ARHGAP21Q5T5U3 1957 aa3.96□□□□□ -1.78
RNU4-39P-201ENST00000362455 FREM3P0C091 2139 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 NBEAL2Q6ZNJ1 2754 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 A0A1W2PPE3 182 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 A6NIZ1 184 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR5H1A6NKK0 313 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 A8MT66 165 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 LOC110117498-PIK3R3F6TDL0 507 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 H7C417 338 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 UBFD1O14562 309 aaKnown RBP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 EIF3HO15372 352 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 HDAC3O15379 428 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 RAD51CO43502 376 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF780AO75290 641 aaPredicted RBP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 SNAPINO95295 136 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 SLC25A16P16260 332 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF17P17021 662 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 IL32P24001 234 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 GABRA3P34903 492 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 RFX3P48380 749 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 GPM6AP51674 278 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 NCBP2P52298 156 aaKnown RBP eCLIP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 FOXA1P55317 472 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 RAP1BP61224 184 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 FOXF1Q12946 379 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 IFT88Q13099 833 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR5I1Q13606 314 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 SSX2Q16385 188 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 NRF1Q16656 503 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 MICBQ29980 383 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 FAM83EQ2M2I3 478 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 NDUFAF6Q330K2 333 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 TMEM176BQ3YBM2 270 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms