RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PGA5P0DJD9 388 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 IL13RA2Q14627 380 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 NOXO1Q8NFA2 376 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 OR10AD1Q8NGE0 317 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 LMX1AQ8TE12 382 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 POM121Q96HA1 1249 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 FAM210BQ96KR6 192 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 PACRGQ96M98 296 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-202ENST00000310645 IGSF23A1L1A6 192 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 SLC31A2O15432 143 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 ECI1P42126 302 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 RAB11AP62491 216 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 CRIP3Q6Q6R5 217 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 OR5C1Q8NGR4 320 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 MISP3Q96FF7 219 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 COL4A2P08572 1712 aa12.8□□□□□ -0.36
COL6A2-202ENST00000310645 SMCO3A2RU48 225 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 FOXI3A8MTJ6 420 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 GEMIN2O14893 280 aaKnown RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 SCAF4O95104 1147 aaKnown RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 FOLR1P15328 257 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 FBLP22087 321 aaKnown RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 CTHP32929 405 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 GUCA1AP43080 201 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 PKIAP61925 76 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 BOD1Q96IK1 185 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 LURAP1Q96LR2 239 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 ALKBH4Q9NXW9 302 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 HS3ST3A1Q9Y663 406 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 SDK2Q58EX2 2172 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 ANKUB1A6NFN9 424 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 IGHV4-34P06331 123 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 PGA3P0DJD8 388 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 VAMP2P63027 116 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 SPIN3Q5JUX0 258 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 FBXL14Q8N1E6 418 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 CA5BP1Q8WTZ4 195 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 TMEM171Q8WVE6 324 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 BCO1Q9HAY6 547 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 SDHAF3Q9NRP4 125 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 HSPA12AO43301 675 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 POU2F2P09086 479 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 ICAM4Q14773 271 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF385CQ66K41 422 aaPredicted RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF880Q6PDB4 577 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 DPPA2Q7Z7J5 298 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 PLPP5Q8NEB5 264 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 ST8SIA1Q92185 356 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 TP53RKQ96S44 253 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 PNRC2Q9NPJ4 139 aaKnown RBP12.79□□□□□ -0.36
COL6A2-202ENST00000310645 GNG13Q9P2W3 67 aa12.79□□□□□ -0.36
COL6A2-202ENST00000310645 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 LINC01565O15544 149 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 PTBP3O95758 552 aaKnown RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF41P51814 821 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 RNF4P78317 190 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF266Q14584 549 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 OR2AE1Q8NHA4 323 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 RLN3Q8WXF3 142 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 FOXD3Q9UJU5 478 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 ZFP92A6NM28 416 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 GABRG2P18507 467 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 NKX2-1P43699 371 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 GLIPR1P48060 266 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 DEFB133Q30KQ1 61 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 CXorf66Q5JRM2 361 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 HIST2H3PS2Q5TEC6 136 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 MSI2Q96DH6 328 aaKnown RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 IER2Q9BTL4 223 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 NKX2-4Q9H2Z4 354 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 KIAA1456Q9P272 454 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 KLHL13Q9P2N7 655 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 EYSQ5T1H1 3165 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 SNRPCP09234 159 aaKnown RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 LMO1P25800 156 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 HERV-K104P61576 105 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 TLE1Q04724 770 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 ARL6IP1Q15041 203 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 SLC25A24Q6NUK1 477 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 C5orf24Q7Z6I8 188 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 CMTM1Q8IZ96 169 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 SSC4DQ8WTU2 575 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 C18orf12Q96KH6 178 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 UBE2J1Q9Y385 318 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-202ENST00000310645 TMED3Q9Y3Q3 217 aa12.78□□□□□ -0.36
COL6A2-202ENST00000310645 IL2RGP31785 369 aa12.77□□□□□ -0.36
COL6A2-202ENST00000310645 DYNLT3P51808 116 aa12.77□□□□□ -0.36
COL6A2-202ENST00000310645 FIP1L1Q6UN15 594 aaKnown RBP12.77□□□□□ -0.36
COL6A2-202ENST00000310645 FBRSQ9HAH7 460 aa12.77□□□□□ -0.36
COL6A2-202ENST00000310645 CLDN17P56750 224 aa12.77□□□□□ -0.37
COL6A2-202ENST00000310645 TAS2R60P59551 318 aa12.77□□□□□ -0.37
COL6A2-202ENST00000310645 HLA-DRB3P79483 266 aa12.77□□□□□ -0.37
COL6A2-202ENST00000310645 CLEC12BQ2HXU8 276 aa12.77□□□□□ -0.37
COL6A2-202ENST00000310645 PIGYQ3MUY2 71 aa12.77□□□□□ -0.37
COL6A2-202ENST00000310645 NKAIN1Q4KMZ8 207 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms